IVF0019685.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0019685.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	chr07: 23475935 .. 23476834 (-)
Sequence length	483
RNA-Seq Expression	IVF0019685.1
Synteny	IVF0019685.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGTATGCTGCATCTCTCTCCCCTCTCTCTCACCTATTAAAATCACTTTCTCCCAAATCACTTCATTTTGTGTGACAAGACTTCTACTCAACGTAGTATAAGGAATGTAGAAATTTTTGTTTTAGCTTCTCAACAGTTTTTGTGATCACTCATGTTCTATATCTAAAAAACTCAGTTTTCTTTTTTATGAAAAATATATTTCTTTAATACTGTTATTTCTTTTGTAATCGACAAAGATGGTAGAGACAAGTGTAGATTTTGGATGAACTAAGGATGTTTCTATGTATATATTAACATTTGAATAGGTTGAAAAAAAATGATGAACGTAACGTAAGATAAGATGTATCCAAATACATGTTTAAAATTATTATTGAATTGTAAACGAATCAGGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATACGACGAAGCAGCTACGATTATGTGTTGTACTCCCAACAATCTCTCCACCAATCATAGCGCACCACATCATCCCTCGCCGGCATCGCCCTCGTCCAAGCTTCTAACTCCGACATTGATCGAGAAGTTGCAAAGATGTCGAATGGCTTCCTCCAAATGACCAAAGCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGAGGGAGGTCACTGGCCGGAGAAAGAGGCCAGATGGGTCTCCAGCCGGGAGGTTGAGGAGGTCCGCCGGCTTGAAGATGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATTAA

mRNA sequence

ATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATACGACGAAGCAGCTACGATTATGTGTTGTACTCCCAACAATCTCTCCACCAATCATAGCGCACCACATCATCCCTCGCCGGCATCGCCCTCGTCCAAGCTTCTAACTCCGACATTGATCGAGAAGTTGCAAAGATCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGAGGGAGGTCACTGGCCGGAGAAAGAGGCCAGATGGGTCTCCAGCCGGGAGGTTGAGGAGGTCCGCCGGCTTGAAGATGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATTAA

Coding sequence (CDS)

ATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATACGACGAAGCAGCTACGATTATGTGTTGTACTCCCAACAATCTCTCCACCAATCATAGCGCACCACATCATCCCTCGCCGGCATCGCCCTCGTCCAAGCTTCTAACTCCGACATTGATCGAGAAGTTGCAAAGATCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGAGGGAGGTCACTGGCCGGAGAAAGAGGCCAGATGGGTCTCCAGCCGGGAGGTTGAGGAGGTCCGCCGGCTTGAAGATGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATTAA

Protein sequence

MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTNHSAPHHPSPASPSSKLLTPTLIEKLQRSQFAVRKSADPTQSPATKLEGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN

Homology

[Close]

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32
Identity = 84/177 (47.46%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA +MC     
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMC----G 60

Query: 61  LSTNHSAPHHPSP-ASPSSKLLTPTLIEKLQRSQFAVRKSADPTQSPA------------ 120
                + P++P+   + SSKLL+ TL  KL +   A  +    TQ+              
Sbjct: 61  PRARTNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADS 120

Query: 121 -------TKLEGGHWPEKEARWV--SSREVEEVRRLEDDHVEQMIQELLDLGSFEFC 156
                  + L  G     E +W   ++   +  R LE+DH+EQMI+ELL  GS E C
Sbjct: 121 DGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-27
Identity = 68/107 (63.55%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRG RQRHWGSWVSEIRH ILKTRIW GTFE+AEDAARAYDEAA +MC T   
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGT--R 60

Query: 61  LSTNHSAPHHPSPA-SPSSKLLTPTLIEKLQRSQFAVRKSADPTQSP 107
             TN   P++P+ + S SSKLL+ TLI KL R   A  +   P+  P
Sbjct: 61  ARTNF--PYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLP 103

[Close]

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN 65
          +++RGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA +M  +  N  TN
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLM--SGRNAKTN 61

[Close]

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.2e-17
Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIM 55
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA +M
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLM 53

[Close]

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN- 65
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA +M     N  TN 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLM--NGQNAKTNF 64

Query: 66 ------HSAPHHPSPASP--SSKLLTPTLIEKLQRS 93
                  + H     SP  S K L+  L  KL++S
Sbjct: 65 PVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKS 98

[Close]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL
Match: A0A1S3BY29 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103494684 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 159/170 (93.53%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR----------SQFAVRKSADPTQSPATKL 120
           LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR          +QFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 161
           EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL
Match: A0A0A0KVJ4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.3e-78
Identity = 150/170 (88.24%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR----------SQFAVRKSADPTQSPATKL 120
           LSTNHSA HHPS A  SSKLLTPT IEKLQR          +QFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 161
           +GGHWPEK ARWV SREVEEVRRLED+HVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL
Match: A0A6J1KDM8 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111492899 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 121/182 (66.48%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQ----------------RSQFAVRKSADPTQ 120
           L TN +AP H   A P S LLTPTLIEKLQ                ++ F+ RKSA P++
Sbjct: 61  LPTNRNAPLHSLSAPPPSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 SPATKLE------GGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNN 161
              T L+      G H+PE +A+WV+  E +E+ RLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL
Match: A0A6J1GC95 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111452652 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.2e-57
Identity = 121/183 (66.12%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSAPHHP-SPASPSSKLLTPTLIEKLQ----------------RSQFAVRKSADPT 120
           L TNH+AP H  S   PSS LLTPTLIEKLQ                ++ F+ RKSA P+
Sbjct: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120

Query: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 161
           +   T  + G      H+PE +++WV+  E +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180

[Close]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL
Match: A0A6J1DIX5 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111020953 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.6e-50
Identity = 115/174 (66.09%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQ +YRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQHKYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSA-PHHPSPAS---PSSKLLTPTLIEKLQR---SQFAVRKSADPTQS-------- 120
           LS+NH+A P + S AS   P SKLLTPTLI+KL++   + F + K   PT++        
Sbjct: 61  LSSNHNAPPQYSSSASTLGPVSKLLTPTLIDKLEKCRMASFQMAKKKLPTKTHLSDRSRR 120

Query: 121 PATKLEGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNN 160
           PA KL+GG         V S E +E  RLEDDHVEQMIQELLDLGSF FCPNNN
Sbjct: 121 PAAKLDGG--------GVQSPETQEFHRLEDDHVEQMIQELLDLGSFHFCPNNN 165

[Close]

BLAST of IVF0019685.1 vs. NCBI nr
Match: XP_008454208.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 322 bits (824), Expect = 1.12e-110
Identity = 159/170 (93.53%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR----------SQFAVRKSADPTQSPATKL 120
           LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR          +QFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 160
           EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of IVF0019685.1 vs. NCBI nr
Match: XP_031740459.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hypothetical protein Csa_015366 [Cucumis sativus])

HSP 1 Score: 300 bits (769), Expect = 3.86e-102
Identity = 150/170 (88.24%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR----------SQFAVRKSADPTQSPATKL 120
           LSTNHSA HHPS A  SSKLLTPT IEKLQR          +QFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 160
           +GGHWPEK ARWV SREVEEVRRLED+HVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of IVF0019685.1 vs. NCBI nr
Match: XP_022998174.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 231 bits (590), Expect = 1.03e-74
Identity = 121/182 (66.48%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQR----------------SQFAVRKSADPTQ 120
           L TN +AP H   A P S LLTPTLIEKLQ+                + F+ RKSA P++
Sbjct: 61  LPTNRNAPLHSLSAPPPSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 SPATKLE------GGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNN 160
              T L+      G H+PE +A+WV+  E +E+ RLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of IVF0019685.1 vs. NCBI nr
Match: XP_022949239.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 231 bits (588), Expect = 2.15e-74
Identity = 121/183 (66.12%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSAPHHP-SPASPSSKLLTPTLIEKLQR----------------SQFAVRKSADPT 120
           L TNH+AP H  S   PSS LLTPTLIEKLQ+                + F+ RKSA P+
Sbjct: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120

Query: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 160
           +   T  + G      H+PE +++WV+  E +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180

[Close]

BLAST of IVF0019685.1 vs. NCBI nr
Match: XP_023525763.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230 bits (586), Expect = 4.33e-74
Identity = 122/183 (66.67%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSAPHHP-SPASPSSKLLTPTLIEKLQR----------------SQFAVRKSADPT 120
           L TNH++P H  S   PSS LLTPTLIEKLQ+                + F+ RKSA P+
Sbjct: 61  LPTNHNSPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120

Query: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 160
           +   T L  G      H PE +A+WV+  E +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 RPHPTNLNDGYGASGVHLPETDAKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180

[Close]

BLAST of IVF0019685.1 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 8.5e-34
Identity = 84/177 (47.46%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA +MC     
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMC----G 60

Query: 61  LSTNHSAPHHPSP-ASPSSKLLTPTLIEKLQRSQFAVRKSADPTQSPA------------ 120
                + P++P+   + SSKLL+ TL  KL +   A  +    TQ+              
Sbjct: 61  PRARTNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADS 120

Query: 121 -------TKLEGGHWPEKEARWV--SSREVEEVRRLEDDHVEQMIQELLDLGSFEFC 156
                  + L  G     E +W   ++   +  R LE+DH+EQMI+ELL  GS E C
Sbjct: 121 DGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of IVF0019685.1 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 9.1e-20
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN 65
          +++RGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA +M  +  N  TN
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLM--SGRNAKTN 61

[Close]

BLAST of IVF0019685.1 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 6.5e-18
Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIM 55
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA +M
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLM 53

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BLAST of IVF0019685.1 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-18
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN- 65
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA +M     N  TN 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLM--NGQNAKTNF 64

Query: 66 ------HSAPHHPSPASP--SSKLLTPTLIEKLQRS 93
                  + H     SP  S K L+  L  KL++S
Sbjct: 65 PVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKS 98

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BLAST of IVF0019685.1 vs. TAIR 10
Match: AT2G40220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 7   RYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMC----------C 66
           RYRGVRQR WG WV+EIR P  +TR WLGTF TAEDAARAYD AA  +            
Sbjct: 54  RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPS 113

Query: 67  TPNNLSTNH---SAPHHPSPASPSSKLLTPTL 86
           +P+++S++    SA   PS +S S++ L P L
Sbjct: 114 SPSSVSSSSSSVSAASSPSTSSSSTQTLRPLL 145

The following BLAST results are available for this feature:

BLAST of IVF0019685.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	1.2e-32	47.46	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	4.4e-27	63.55	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	1.3e-18	72.88	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	9.2e-17	75.51	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.2e-16	53.13	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of IVF0019685.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BY29	1.4e-84	93.53	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KVJ4	3.3e-78	88.24	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=...	[more]
A0A6J1KDM8	1.9e-57	66.48	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GC95	3.2e-57	66.12	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1DIX5	8.6e-50	66.09	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]

BLAST of IVF0019685.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454208.1	1.12e-110	93.53	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_031740459.1	3.86e-102	88.24	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hy...	[more]
XP_022998174.1	1.03e-74	66.48	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]
XP_022949239.1	2.15e-74	66.12	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_023525763.1	4.33e-74	66.67	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of IVF0019685.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	8.5e-34	47.46	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	9.1e-20	72.88	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	6.5e-18	75.51	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	8.5e-18	53.13	Integrase-type DNA-binding superfamily protein	[more]
AT2G40220.1	1.8e-15	50.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 6.5E-29 score: 112.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..51 e-value: 1.9E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..51 score: 18.373243
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..55 e-value: 5.62625E-28 score: 96.957
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 6.0E-21 score: 76.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..118
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..96
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..96
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 113..156
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 113..156
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..55

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0019685	IVF0019685	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019685.1-exon	IVF0019685.1-exon-chr07:23475935..23476143	exon
IVF0019685.1-exon	IVF0019685.1-exon-chr07:23476173..23476363	exon
IVF0019685.1-exon	IVF0019685.1-exon-chr07:23476752..23476834	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019685.1-cds	IVF0019685.1-cds-chr07:23475935..23476143	CDS
IVF0019685.1-cds	IVF0019685.1-cds-chr07:23476173..23476363	CDS
IVF0019685.1-cds	IVF0019685.1-cds-chr07:23476752..23476834	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0019685.1	IVF0019685.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity