IVF0006362 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTACACTTCAAAAGCTTTTTACAAGCAAATAGGGAGAGCAAAAGAAAAAAAAAGGAAGAATTGTAGGGATAAAAATGTCGAGAAGAAGCAAAACCTACCACCCAAGAGCAAGGCTATCAAGAGAACAGTTGCTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTGAGCACCACCGAGCTCACTGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGCCCTACCGAGCTCGCCACGCTCTTTTTCATGCCGACTCCGACAGAGATGGATTCATCAGCGAGAAGGATTTCGAATTACTTGTTAATTATGCTGAGCAACGCCAATATACCGTCATTTGATTTTCTTTTACCTTTTCTTTTCTTTTTTGGGTTTCCTTTTCCATTTACGATATAAGGTTTAATGATCTCAGTCTATAATCTGTGGGACGTACCCGTAAGATCAAAGATGAAAATCATGTGTGATCAAGATTATATATGATTTTTCATATTTTACTATACGATCAACAAATTATACTCGAGATCGAGAAACTATTACTAATAACTGCTTGTGAGTGTTTAGGGTCAAGTTCAAATTACCTTCATTTCCATTTGTTCTAATCAAAAACTGCTTATAGTTACTGTTCTTTCTTTCTTTCTTTTTTAAATAAAGGATACTTTCTTGTTGTAAACTGCTTATATA CTACACTTCAAAAGCTTTTTACAAGCAAATAGGGAGAGCAAAAGAAAAAAAAAGGAAGAATTGTAGGGATAAAAATGTCGAGAAGAAGCAAAACCTACCACCCAAGAGCAAGGCTATCAAGAGAACAGTTGCTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTGAGCACCACCGAGCTCACTGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGCCCTACCGAGCTCGCCACGCTCTTTTTCATGCCGACTCCGACAGAGATGGATTCATCAGCGAGAAGGATTTCGAATTACTTGTTAATTATGCTGAGCAACGCCAATATACCGTCATTTGATTTTCTTTTACCTTTTCTTTTCTTTTTTGGGTTTCCTTTTCCATTTACGATATAAGGTTTAATGATCTCAGTCTATAATCTGTGGGACGTACCCGTAAGATCAAAGATGAAAATCATGTGTGATCAAGATTATATATGATTTTTCATATTTTACTATACGATCAACAAATTATACTCGAGATCGAGAAACTATTACTAATAACTGCTTGTGAGTGTTTAGGGTCAAGTTCAAATTACCTTCATTTCCATTTGTTCTAATCAAAAACTGCTTATAGTTACTGTTCTTTCTTTCTTTCTTTTTTAAATAAAGGATACTTTCTTGTTGTAAACTGCTTATATA ATGTCGAGAAGAAGCAAAACCTACCACCCAAGAGCAAGGCTATCAAGAGAACAGTTGCTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTGAGCACCACCGAGCTCACTGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGCCCTACCGAGCTCGCCACGCTCTTTTTCATGCCGACTCCGACAGAGATGGATTCATCAGCGAGAAGGATTTCGAATTACTTGTTAATTATGCTGAGCAACGCCAATATACCGTCATTTGA MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI Homology
BLAST of IVF0006362 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04 Identity = 23/66 (34.85%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04 Identity = 23/67 (34.33%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy Swiss-Prot
Match: Q9S744 (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-04 Identity = 22/63 (34.92%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.3e-43 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy TrEMBL
Match: A0A5C7H618 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021566 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.3e-12 Identity = 39/84 (46.43%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of IVF0006362 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.8e-12 Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of IVF0006362 vs. NCBI nr
Match: KAA0064376.1 (putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK20211.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]) HSP 1 Score: 182 bits (462), Expect = 7.26e-58 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of IVF0006362 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_012915 [Cucumis sativus]) HSP 1 Score: 166 bits (420), Expect = 1.86e-51 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of IVF0006362 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147 bits (370), Expect = 7.90e-44 Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of IVF0006362 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144 bits (362), Expect = 1.33e-41 Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of IVF0006362 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136 bits (343), Expect = 1.04e-39 Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of IVF0006362 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 47.4 bits (111), Expect = 7.2e-06 Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of IVF0006362 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 22/63 (34.92%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of IVF0006362 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04 Identity = 19/58 (32.76%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of IVF0006362 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 ) HSP 1 Score: 41.2 bits (95), Expect = 5.2e-04 Identity = 20/69 (28.99%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of IVF0006362 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 ) HSP 1 Score: 41.2 bits (95), Expect = 5.2e-04 Identity = 20/69 (28.99%), Postives = 39/69 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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