IVF0002527 (gene) Melon (IVF77) v1

Overview
NameIVF0002527
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMitogen-activated protein kinase kinase kinase 2
Locationchr01: 11874882 .. 11875043 (+)
RNA-Seq ExpressionIVF0002527
SyntenyIVF0002527
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGATACTAGGCATAAGGATGGGTGGGAAGTGGAAGTTAATATTGAGCATGAGGATGGGTGGGAAGTAGAAGTTGATGCTAGACATGAGGATGGACAGAGGGAGCATTATCATCTCGAAGAGGAGCAACGAGGTTATCTTCGTAACCTTCTATAG

mRNA sequence

ATGGAAGTTGATACTAGGCATAAGGATGGGTGGGAAGTGGAAGTTAATATTGAGCATGAGGATGGGTGGGAAGTAGAAGTTGATGCTAGACATGAGGATGGACAGAGGGAGCATTATCATCTCGAAGAGGAGCAACGAGGTTATCTTCGTAACCTTCTATAG

Coding sequence (CDS)

ATGGAAGTTGATACTAGGCATAAGGATGGGTGGGAAGTGGAAGTTAATATTGAGCATGAGGATGGGTGGGAAGTAGAAGTTGATGCTAGACATGAGGATGGACAGAGGGAGCATTATCATCTCGAAGAGGAGCAACGAGGTTATCTTCGTAACCTTCTATAG

Protein sequence

MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL
Homology
[Close]
BLAST of IVF0002527 vs. ExPASy TrEMBL
Match: A0A5A7SIW7 (Mitogen-activated protein kinase kinase kinase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00830 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.6e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1   MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 54
           MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL
Sbjct: 100 MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 152

[Close]
BLAST of IVF0002527 vs. ExPASy TrEMBL
Match: A0A1S3BIX8 (mitogen-activated protein kinase kinase kinase 2 OS=Cucumis melo OX=3656 GN=LOC103490380 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-21
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1   MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 54
           MEVD RHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL
Sbjct: 503 MEVDNRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 555

[Close]
BLAST of IVF0002527 vs. NCBI nr
Match: KAA0025142.1 (mitogen-activated protein kinase kinase kinase 2 [Cucumis melo var. makuwa] >TYK23101.1 mitogen-activated protein kinase kinase kinase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 2.65e-30
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1   MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 53
           MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL
Sbjct: 100 MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 152

[Close]
BLAST of IVF0002527 vs. NCBI nr
Match: XP_008448094.1 (PREDICTED: mitogen-activated protein kinase kinase kinase 2 [Cucumis melo])

HSP 1 Score: 111 bits (277), Expect = 7.77e-27
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1   MEVDTRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 53
           MEVD RHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL
Sbjct: 503 MEVDNRHKDGWEVEVNIEHEDGWEVEVDARHEDGQREHYHLEEEQRGYLRNLL 555

The following BLAST results are available for this feature:
BLAST of IVF0002527 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0002527 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SIW75.6e-22100.00Mitogen-activated protein kinase kinase kinase 2 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BIX82.1e-2198.11mitogen-activated protein kinase kinase kinase 2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
BLAST of IVF0002527 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025142.12.65e-30100.00mitogen-activated protein kinase kinase kinase 2 [Cucumis melo var. makuwa] >TYK... [more]
XP_008448094.17.77e-2798.11PREDICTED: mitogen-activated protein kinase kinase kinase 2 [Cucumis melo][more]
BLAST of IVF0002527 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002527.2IVF0002527.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity