IVF0008121 (gene) Melon (IVF77) v1

Overview


Name	IVF0008121
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NHL domain protein
Location	chr09: 3199869 .. 3200490 (-)
RNA-Seq Expression	IVF0008121
Synteny	IVF0008121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTAGCCCAATCTCCCGACTTCTCTTCCGACGAAAATGGCTTCCATAGCAATGACCTTCACGACGCCGTTTTCGCTACCCATGGTTGTTGTTTCTGGATCCCTTGCCTGAGATCCAATTCCTCACAGTCATGGTGGGAGCGAATTAGGGCTGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGATTTCGCGAATGGTCTGAAATCGTCGCTGGCCCTAAATGGAAAACCTTCATTCGTCAATTTCATAAGAATCGAAACCGTCAATCTACTTTCCGTTACGATCCCCTCAGTTATTCTCTTAATTTCGATGAAGGTCCGGCTCATGAAGATTCTTTCACCGATGATTTTGTACGACGTGACTTCTCTACTCGATTCGCAGCCATTCCGGCTTCCGCTAAATCGTCTATGGACCTTGTTAAGGACAGTCCGTCCTTAATTTGAGTCCGGAGTTGCGGCGGAATAGACGGCATTGCCTTTGGAATCTCGGTTGGGTCTAGCCGGAGCCCCCGTACGCGGTGGCCTTCGGAAAGATTCCGGCGGAGGAGCAGCGGTGGGGAGATTAGCCGTTTTGGGGACGATGGAAACTATGAATCTGAATTTGGGTTAA

mRNA sequence

ATGTCTCTAGCCCAATCTCCCGACTTCTCTTCCGACGAAAATGGCTTCCATAGCAATGACCTTCACGACGCCGTTTTCGCTACCCATGGTTGTTGTTTCTGGATCCCTTGCCTGAGATCCAATTCCTCACAGTCATGGTGGGAGCGAATTAGGGCTGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGATTTCGCGAATGGTCTGAAATCGTCGCTGGCCCTAAATGGAAAACCTTCATTCGTCAATTTCATAAGAATCGAAACCGTCAATCTACTTTCCGTTACGATCCCCTCAGTTATTCTCTTAATTTCGATGAAGGTCCGGCTCATGAAGATTCTTTCACCGATGATTTTGTACGACGTGACTTCTCTACTCGATTCGCAGCCATTCCGGCTTCCGCTAAATCGTCTATGGACCTTGTTAAGGACACCGGAGCCCCCGTACGCGGTGGCCTTCGGAAAGATTCCGGCGGAGGAGCAGCGGTGGGGAGATTAGCCGTTTTGGGGACGATGGAAACTATGAATCTGAATTTGGGTTAA

Coding sequence (CDS)

ATGTCTCTAGCCCAATCTCCCGACTTCTCTTCCGACGAAAATGGCTTCCATAGCAATGACCTTCACGACGCCGTTTTCGCTACCCATGGTTGTTGTTTCTGGATCCCTTGCCTGAGATCCAATTCCTCACAGTCATGGTGGGAGCGAATTAGGGCTGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGATTTCGCGAATGGTCTGAAATCGTCGCTGGCCCTAAATGGAAAACCTTCATTCGTCAATTTCATAAGAATCGAAACCGTCAATCTACTTTCCGTTACGATCCCCTCAGTTATTCTCTTAATTTCGATGAAGGTCCGGCTCATGAAGATTCTTTCACCGATGATTTTGTACGACGTGACTTCTCTACTCGATTCGCAGCCATTCCGGCTTCCGCTAAATCGTCTATGGACCTTGTTAAGGACACCGGAGCCCCCGTACGCGGTGGCCTTCGGAAAGATTCCGGCGGAGGAGCAGCGGTGGGGAGATTAGCCGTTTTGGGGACGATGGAAACTATGAATCTGAATTTGGGTTAA

Protein sequence

MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDDFVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLNLG

Homology

[Close]

BLAST of IVF0008121 vs. ExPASy TrEMBL
Match: A0A5A7T228 (Putative NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00830 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.0e-103
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60
           MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120
           LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN 180
           FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN 180

Query: 181 LG 183
           LG
Sbjct: 181 LG 182

[Close]

BLAST of IVF0008121 vs. ExPASy TrEMBL
Match: A0A1S4E267 (uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60
           MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120
           LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FVRRDFSTRFAAIPASAKSSMDLVKDT 148
           FVRRDFSTRFAAIPASAKSSMDLVKD+
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKDS 147

[Close]

BLAST of IVF0008121 vs. ExPASy TrEMBL
Match: A0A0A0KRY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGF-HSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEW 60
           MSLA SPD SSDENGF H++DLHDAVFAT GCC WIPCLRSNSSQSWWERIRAADNDDEW
Sbjct: 1   MSLAHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTD 120
           WL+GWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAH+D FTD
Sbjct: 61  WLKGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFTD 120

Query: 121 DFVRRDFSTRFAAIPASAKSSMDLVKDT 148
           DFVRRDFSTRFAAIPASAKSSMDL KD+
Sbjct: 121 DFVRRDFSTRFAAIPASAKSSMDLGKDS 148

[Close]

BLAST of IVF0008121 vs. ExPASy TrEMBL
Match: A0A6J1HFG4 (uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC111462557 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.6e-68
Identity = 120/147 (81.63%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSND-LHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEW 60
           MS+ QSPD SSD NGFH++D LH+A FA+ GCCFW+PCLRSN S+SWWERIRAADNDDEW
Sbjct: 1   MSVPQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTD 120
           WLRGWKRFR+WSEIVAGPKWKTFIRQFHKNR+RQST+RYDPLSY+LNFDEGPA +D F++
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFVRRDFSTRFAAIPASAKSSMDLVKD 147
           DF+RRDFS RFA+IPASAKSSMDL KD
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKD 147

[Close]

BLAST of IVF0008121 vs. ExPASy TrEMBL
Match: A0A6J1JTQ3 (uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.3e-67
Identity = 118/147 (80.27%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSND-LHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEW 60
           MS++QSPD SSD NGFH++D LH+A FA+ GCCFW+PCLRSN S++WWERIRAADNDDEW
Sbjct: 1   MSVSQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKTWWERIRAADNDDEW 60

Query: 61  WLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTD 120
           WLRGWKRFR+WSEIVAGPKWKTFIRQFHKNR+RQST+RYDPLSY+LNFD+GPA +D F +
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDDGPALDDPFRE 120

Query: 121 DFVRRDFSTRFAAIPASAKSSMDLVKD 147
           DF+RRDFS RFA+IPASAKSSMDL KD
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKD 147

[Close]

BLAST of IVF0008121 vs. NCBI nr
Match: KAA0037502.1 (putative NHL domain-containing protein [Cucumis melo var. makuwa] >TYK01977.1 putative NHL domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 386 bits (992), Expect = 1.01e-135
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60
           MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120
           LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN 180
           FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKDTGAPVRGGLRKDSGGGAAVGRLAVLGTMETMNLN 180

Query: 181 LG 182
           LG
Sbjct: 181 LG 182

[Close]

BLAST of IVF0008121 vs. NCBI nr
Match: XP_016902318.1 (PREDICTED: uncharacterized protein LOC107991628 [Cucumis melo])

HSP 1 Score: 320 bits (821), Expect = 4.06e-110
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60
           MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120
           LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FVRRDFSTRFAAIPASAKSSMDLVKDT 147
           FVRRDFSTRFAAIPASAKSSMDLVKD+
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKDS 147

[Close]

BLAST of IVF0008121 vs. NCBI nr
Match: XP_031741765.1 (uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical protein Csa_008790 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 1.70e-100
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGF-HSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEW 60
           MSLA SPD SSDENGF H++DLHDAVFAT GCC WIPCLRSNSSQSWWERIRAADNDDEW
Sbjct: 1   MSLAHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTD 120
           WL+GWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAH+D FTD
Sbjct: 61  WLKGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFTD 120

Query: 121 DFVRRDFSTRFAAIPASAKSSMDLVKDT 147
           DFVRRDFSTRFAAIPASAKSSMDL KD+
Sbjct: 121 DFVRRDFSTRFAAIPASAKSSMDLGKDS 148

[Close]

BLAST of IVF0008121 vs. NCBI nr
Match: XP_038889212.1 (uncharacterized protein LOC120079097 [Benincasa hispida])

HSP 1 Score: 286 bits (733), Expect = 1.06e-96
Identity = 128/146 (87.67%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60
           MSLAQSPD SSDEN FH +DLHDA F + GCC W+PCLRSN SQSWWERIRAADNDDEWW
Sbjct: 1   MSLAQSPDLSSDENAFHGDDLHDAAFVSRGCCLWLPCLRSNPSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120
           LRGWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYDPLSYSLNFDEGPAH+D F+DD
Sbjct: 61  LRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFSDD 120

Query: 121 FVRRDFSTRFAAIPASAKSSMDLVKD 146
            VRRDFSTRFAAIPASAKSSMDL KD
Sbjct: 121 LVRRDFSTRFAAIPASAKSSMDLGKD 146

[Close]

BLAST of IVF0008121 vs. NCBI nr
Match: KAG6602448.1 (hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033131.1 hypothetical protein SDJN02_07184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270 bits (690), Expect = 3.92e-90
Identity = 120/147 (81.63%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MSLAQSPDFSSDENGFHSNDL-HDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEW 60
           MS++QSPD SSD NGFH++DL H+A FA+ GCCFW+PCLRSN S+SWWERIRAADNDDEW
Sbjct: 1   MSVSQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTD 120
           WLRGWKRFR+WSEIVAGPKWKTFIRQFHKNR+RQST+RYDPLSY+LNFDEGPA +D F++
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFVRRDFSTRFAAIPASAKSSMDLVKD 146
           DF+RRDFS RFA+IPASAKSSMDL KD
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKD 147

[Close]

BLAST of IVF0008121 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-34
Identity = 73/155 (47.10%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 18  SNDLHDAVFATHGCCFWIPCLRSN-----SSQSWWERIRAADN---DDEWWLRGWKRFRE 77
           ++++H+A+FA  GCCF +PCL S+     +   WW+RIR  D    D+ WW+ GW + RE
Sbjct: 597 TDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSGWMKMRE 656

Query: 78  WSEIVAGPKWKTFIRQFHK------------NRNRQSTFRYDPLSYSLNFDEGPAHEDSF 137
           WSEIVAGPKWKTFIR+F +            NR    +FRYD  SYSLNFD+G      F
Sbjct: 657 WSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDG-KQTGHF 716

Query: 138 TDDFVRRDFSTRFAA--IPASAKSSMDLVKDTGAP 151
            D+F  RD+S RFAA  +P S K S+D   D  AP
Sbjct: 717 EDEFPYRDYSMRFAAPSLPVSTKCSIDFDNDNHAP 750

[Close]

BLAST of IVF0008121 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 72/164 (43.90%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 18  SNDLHDAVFATHGCCFWIPCLRSNSSQS-----WWERIRAADN---DDEWWLRGWKRFRE 77
           ++D+H+A+FA  GCCF +PCL S+   +     WW+RI   D    D+ WW+RGW+R RE
Sbjct: 14  TDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWWIRGWRRMRE 73

Query: 78  WSEIVAGPKWKTFIRQFHKNR----------------------NR---QSTFRYDPLSYS 137
           WSE+VAGP+WKT+IR+F ++                       NR   Q  FRYD LSYS
Sbjct: 74  WSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQGKFRYDQLSYS 133

Query: 138 LNFDEGPAHEDSFTDDFVRRDFSTRFAA--IPASAKSSMDLVKD 147
           LNFD+G      F D+F  RD+S RFAA  +P S K S+D   D
Sbjct: 134 LNFDDG-NQTGHFDDEFPYRDYSMRFAAPSLPVSTKCSIDFDSD 176

[Close]

BLAST of IVF0008121 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 37  CLRSNSSQSWWERI-RAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFHKNRNR--- 96
           C  +    SWW+RI R    +  WW+R + + REWSEIVAGP+WKTFIR+F+++  R   
Sbjct: 15  CCSTTVKSSWWQRIHRNNHQEPRWWVRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 74

Query: 97  ---QSTFRYDPLSYSLNFDEGPAHEDSFTDDFVRRDFSTRFAAIP-ASAKS----SMDLV 146
                 FRYDP+SY+L+F++    +D        R FS R+A++P AS KS    S+D V
Sbjct: 75  WDDSDKFRYDPVSYTLSFEDEDKDDDDEAGVGGVRSFSMRYASVPVASGKSPAVISVDAV 134

[Close]

BLAST of IVF0008121 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 31  CCFWIPCLRSNSS----QSWWERIRAAD---------NDDEWWLRGWKRFREWSEIVAGP 90
           CC +    RS SS     S W RIR  D         ++  WW+R   + REWSEIVAGP
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWWIRASLKIREWSEIVAGP 79

Query: 91  KWKTFIRQFHKNRNR------QSTFRYDPLSYSLNFDEGPAHEDSFTDDFVRRDFSTRFA 135
           +WKTFIR+F+++  R         F+YDPLSYSLNFD+    ED +      R FSTRFA
Sbjct: 80  RWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDD-EEDEYVGLGGLRSFSTRFA 139

[Close]

BLAST of IVF0008121 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 8.2e-09
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 0


Query: 43  SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQF---HKNRNRQSTFRYD 102
           S+  W      +    W     K  +E SE +AGPKWK FIR F    K   R   F YD
Sbjct: 42  SRGGWSGCLQEERRGNWGSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYD 101

Query: 103 PLSYSLNFDEGPAHEDSFTDDFV 123
             +YSLNFD+G   +DS  + FV
Sbjct: 102 LKNYSLNFDDGGDGKDSSPERFV 124

The following BLAST results are available for this feature:

BLAST of IVF0008121 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T228	2.0e-103	100.00	Putative NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4E267	1.8e-83	99.32	uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=...	[more]
A0A0A0KRY7	3.5e-76	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1	[more]
A0A6J1HFG4	4.6e-68	81.63	uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC1114625...	[more]
A0A6J1JTQ3	2.3e-67	80.27	uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422...	[more]

BLAST of IVF0008121 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037502.1	1.01e-135	100.00	putative NHL domain-containing protein [Cucumis melo var. makuwa] >TYK01977.1 pu...	[more]
XP_016902318.1	4.06e-110	99.32	PREDICTED: uncharacterized protein LOC107991628 [Cucumis melo]	[more]
XP_031741765.1	1.70e-100	91.89	uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical ...	[more]
XP_038889212.1	1.06e-96	87.67	uncharacterized protein LOC120079097 [Benincasa hispida]	[more]
KAG6602448.1	3.92e-90	81.63	hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0008121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14890.1	5.7e-34	47.10	NHL domain-containing protein	[more]
AT3G01430.1	1.8e-32	43.90	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	1.6e-20	42.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G62865.1	3.6e-20	44.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	8.2e-09	39.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 11..147
None	No IPR available	PANTHER	PTHR47076:SF1	NHL DOMAIN PROTEIN	coord: 11..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008121.1	IVF0008121.1	mRNA