Pay0005962 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005962
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	30S ribosomal protein S15, chloroplastic
Location	Contig00288_ERROPOS136135+: 10464 .. 10736 (-)
RNA-Seq Expression	Pay0005962
Synteny	Pay0005962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCACATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGAAAAATAAAATGCGTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAA

mRNA sequence

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCACATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGAAAAATAAAATGCGTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAA

Coding sequence (CDS)

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCACATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGAAAAATAAAATGCGTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAA

Protein sequence

MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ

Homology

[Close]

BLAST of Pay0005962 vs. ExPASy Swiss-Prot
Match: Q4VZL1 (30S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.1e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. ExPASy Swiss-Prot
Match: B1NWK6 (30S ribosomal protein S15, chloroplastic OS=Manihot esculenta OX=3983 GN=rps15 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.2e-35
Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSF SVISQEEK EN GSVEFQ+VSFTNKIRRLTSH ELH+KDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFISVISQEEKDENKGSVEFQIVSFTNKIRRLTSHFELHRKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYL+KKN++RYKELI++LDIRESKT+
Sbjct: 61 QRLLSYLAKKNRVRYKELISRLDIRESKTR 90

[Close]

BLAST of Pay0005962 vs. ExPASy Swiss-Prot
Match: Q14FA1 (30S ribosomal protein S15, chloroplastic OS=Populus alba OX=43335 GN=rps15 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-34
Identity = 77/90 (85.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLRKILGKR
Sbjct: 1  MVKSSFISIISQEDKKENKGSVEFQIVSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYL+KKN +RYKELI+QL+IRESKT+
Sbjct: 61 QRLLSYLAKKNGVRYKELISQLNIRESKTR 90

[Close]

BLAST of Pay0005962 vs. ExPASy Swiss-Prot
Match: A4GYX3 (30S ribosomal protein S15, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps15 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-34
Identity = 77/90 (85.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVK+SF S+ISQE+KKEN GSVEFQ+VSFTNKIRRLTSHLELH+KDYLSQRGLRKILGKR
Sbjct: 1  MVKSSFISIISQEDKKENKGSVEFQIVSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYL+KKN +RYKELI+QL+IRESKT+
Sbjct: 61 QRLLSYLAKKNGVRYKELISQLNIRESKTR 90

[Close]

BLAST of Pay0005962 vs. ExPASy Swiss-Prot
Match: Q49KU1 (30S ribosomal protein S15, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps15 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-34
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MVKNSFSSVISQ-EEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGK 60
          MVKNSF SVISQ EEK+EN GS+EFQV  FTNKIRRLTSHLELH+KDYLSQRGLRKILGK
Sbjct: 1  MVKNSFISVISQEEEKEENRGSIEFQVFRFTNKIRRLTSHLELHRKDYLSQRGLRKILGK 60

Query: 61 RQRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          RQRLLSYLSKKN++RYKELI+QLDIRESKT+
Sbjct: 61 RQRLLSYLSKKNRIRYKELISQLDIRESKTR 91

[Close]

BLAST of Pay0005962 vs. ExPASy TrEMBL
Match: A0A218KG95 (30S ribosomal protein S15, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. ExPASy TrEMBL
Match: A0A1X9Q1Q7 (30S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. ExPASy TrEMBL
Match: A0A249RZG6 (30S ribosomal protein S15, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. ExPASy TrEMBL
Match: A0A1S4EU67 (30S ribosomal protein S15, chloroplastic OS=Cucumis melo OX=3656 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. ExPASy TrEMBL
Match: A0A249RXN8 (30S ribosomal protein S15, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rps15 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. NCBI nr
Match: YP_004841842.1 (ribosomal protein S15 [Cucumis melo subsp. melo] >YP_009004098.1 ribosomal protein S15 [Cucumis hystrix] >YP_009346533.1 ribosomal protein S15 [Cucumis x hytivus] >YP_009420852.1 ribosomal protein S15 [Citrullus colocynthis] >YP_009431614.1 ribosomal protein S15 [Citrullus amarus] >YP_009431700.1 ribosomal protein S15 [Citrullus rehmii] >YP_009752374.1 ribosomal protein S15 [Bryonia marmorata] >YP_009753136.1 ribosomal protein S15 [Corallocarpus boehmii] >YP_009860132.1 ribosomal protein S15 [Cucumis melo subsp. agrestis] >YP_247657.1 ribosomal protein S15 [Cucumis sativus] >Q4VZL1.1 RecName: Full=30S ribosomal protein S15, chloroplastic [Cucumis sativus] >ALF03358.1 ribosomal protein S15 [Cucumis sativus var. hardwickii] >APW82520.1 ribosomal protein S15 [Citrullus lanatus subsp. vulgaris] >ASY96650.1 ribosomal protein S15 [Cucumis melo var. conomon] >ASY96737.1 ribosomal protein S15 [Cucumis melo var. makuwa] >ASY96824.1 ribosomal protein S15 [Cucumis melo var. momordica] >ASY96911.1 ribosomal protein S15 [Cucumis melo var. dudaim] >ASY96998.1 ribosomal protein S15 [Cucumis melo var. cantalupo] >ASY97172.1 ribosomal protein S15 [Cucumis melo var. inodorus] >ASY97346.1 ribosomal protein S15 [Cucumis melo var. flexuosus] >AVE15389.1 ribosomal protein S15 [Cucumis sativus var. sativus] >QJF46443.1 ribosomal protein S15 [Cucumis melo] >QZL38652.1 ribosomal protein S15 [Citrullus naudinianus] >QZL38741.1 ribosomal protein S15 [Citrullus ecirrhosus])

HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. NCBI nr
Match: ABI98802.1 (ribosomal protein S15 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
           MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 16  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 75

Query: 61  QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
           QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 76  QRLLSYLSKKNKMRYKELINQLDIRESKTQ 105

[Close]

BLAST of Pay0005962 vs. NCBI nr
Match: YP_009560892.1 (ribosomal protein S15 [Trichosanthes kirilowii] >YP_009752299.1 ribosomal protein S15 [Trichosanthes baviensis] >YP_009752468.1 ribosomal protein S15 [Trichosanthes tricuspidata] >YP_009752628.1 ribosomal protein S15 [Trichosanthes homophylla] >YP_009753230.1 ribosomal protein S15 [Trichosanthes truncata] >YP_009753667.1 ribosomal protein S15 [Trichosanthes wallichiana] >YP_009753761.1 ribosomal protein S15 [Trichosanthes nervifolia] >YP_009753836.1 ribosomal protein S15 [Trichosanthes pilosa] >QJD26528.1 ribosomal protein S15 [Trichosanthes kirilowii var. japonica] >QJD26702.1 ribosomal protein S15 [Trichosanthes rosthornii] >QAB33243.1 ribosomal protein S15 [Trichosanthes kirilowii] >QIT04273.1 ribosomal protein S15 [Trichosanthes baviensis] >QIT04686.1 ribosomal protein S15 [Trichosanthes wallichiana])

HSP 1 Score: 166.8 bits (421), Expect = 8.7e-38
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVV+FTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVNFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. NCBI nr
Match: QHB76022.1 (ribosomal protein S15 [Cucumis melo subsp. melo])

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLR+ILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRQILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. NCBI nr
Match: YP_009752722.1 (ribosomal protein S15 [Ampelosycios humblotii] >QIT05203.1 ribosomal protein S15 [Ampelosycios humblotii])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          MVKNSFSSVISQEEKKENGGSVEFQV SFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR
Sbjct: 1  MVKNSFSSVISQEEKKENGGSVEFQVFSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLLSYLSKKNKMRYKELINQLDIRESKTQ
Sbjct: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 90

[Close]

BLAST of Pay0005962 vs. TAIR 10
Match: ATCG01120.1 (chloroplast ribosomal protein S15 )

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-30
Identity = 70/90 (77.78%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKR 60
          M+KN   S   +E+K+E+ GSVEFQV SFTNKIRRLTSHLELH+KDYLSQRGLRKILGKR
Sbjct: 1  MIKNIVISF--EEQKEESRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKR 60

Query: 61 QRLLSYLSKKNKMRYKELINQLDIRESKTQ 91
          QRLL+YLSKKN++RYKELINQL+IRE KT+
Sbjct: 61 QRLLAYLSKKNRVRYKELINQLNIRELKTR 88

[Close]

BLAST of Pay0005962 vs. TAIR 10
Match: AT1G15810.1 (S15/NS1, RNA-binding protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04
Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 20  GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELI 79
           GS   QV   T KI+ L+S   LHKKD  S++GL  ++ KR++LL YL + +   Y  ++
Sbjct: 349 GSARVQVAQLTTKIKHLSS--SLHKKDKHSRKGLLGMVQKRKKLLKYLRRTDWDSYCLVL 408

Query: 80  NQLDIRES 88
           ++L +R++
Sbjct: 409 SKLSLRDN 414

The following BLAST results are available for this feature:

BLAST of Pay0005962 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL1	5.1e-41	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=...	[more]
B1NWK6	4.2e-35	86.67	30S ribosomal protein S15, chloroplastic OS=Manihot esculenta OX=3983 GN=rps15 P...	[more]
Q14FA1	1.2e-34	85.56	30S ribosomal protein S15, chloroplastic OS=Populus alba OX=43335 GN=rps15 PE=3 ...	[more]
A4GYX3	1.2e-34	85.56	30S ribosomal protein S15, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps15...	[more]
Q49KU1	4.7e-34	86.81	30S ribosomal protein S15, chloroplastic OS=Eucalyptus globulus subsp. globulus ...	[more]

BLAST of Pay0005962 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG95	1.9e-38	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis sativus var. hardwickii OX=3...	[more]
A0A1X9Q1Q7	1.9e-38	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=...	[more]
A0A249RZG6	1.9e-38	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis melo var. cantalupensis OX=3...	[more]
A0A1S4EU67	1.9e-38	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis melo OX=3656 GN=rps15 PE=3 S...	[more]
A0A249RXN8	1.9e-38	100.00	30S ribosomal protein S15, chloroplastic OS=Cucumis melo subsp. agrestis OX=2176...	[more]

BLAST of Pay0005962 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841842.1	3.9e-38	100.00	ribosomal protein S15 [Cucumis melo subsp. melo] >YP_009004098.1 ribosomal prote...	[more]
ABI98802.1	3.9e-38	100.00	ribosomal protein S15 [Cucumis sativus]	[more]
YP_009560892.1	8.7e-38	98.89	ribosomal protein S15 [Trichosanthes kirilowii] >YP_009752299.1 ribosomal protei...	[more]
QHB76022.1	1.1e-37	98.89	ribosomal protein S15 [Cucumis melo subsp. melo]	[more]
YP_009752722.1	1.5e-37	98.89	ribosomal protein S15 [Ampelosycios humblotii] >QIT05203.1 ribosomal protein S15...	[more]

BLAST of Pay0005962 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01120.1	2.5e-30	77.78	chloroplast ribosomal protein S15	[more]
AT1G15810.1	2.3e-04	38.24	S15/NS1, RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	SMART	SM01387	Ribosomal_S15_2	coord: 11..85 e-value: 1.9E-23 score: 93.9
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 13..85 e-value: 3.3E-24 score: 84.9
IPR000589	Ribosomal protein S15	PROSITE	PS00362	RIBOSOMAL_S15	coord: 36..66
IPR000589	Ribosomal protein S15	CDD	cd00353	Ribosomal_S15p_S13e	coord: 15..83 e-value: 8.25417E-21 score: 76.3878
None	No IPR available	GENE3D	1.10.287.10		coord: 1..90 e-value: 5.5E-32 score: 111.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR23321:SF27	30S RIBOSOMAL PROTEIN S15, CHLOROPLASTIC	coord: 12..86
IPR005290	Ribosomal protein S15, bacterial-type	TIGRFAM	TIGR00952	TIGR00952	coord: 9..86 e-value: 1.3E-22 score: 77.8
IPR005290	Ribosomal protein S15, bacterial-type	PANTHER	PTHR23321	RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR	coord: 12..86
IPR005290	Ribosomal protein S15, bacterial-type	HAMAP	MF_01343_B	Ribosomal_S15_B	coord: 1..86 score: 18.873394
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 14..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005962.1	Pay0005962.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome