PI0021785 (gene) Melon (PI 482460) v1

Overview
NamePI0021785
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPolyprotein
Locationchr07: 10067007 .. 10068253 (-)
RNA-Seq ExpressionPI0021785
SyntenyPI0021785
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTTCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCGGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGACCGTTGCACCAGAAAAACGGTTCATACCAAGGTCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAAAATTTCCCTAAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGAAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATATAG

mRNA sequence

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTTCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCGGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGACCGTTGCACCAGAAAAACGGTTCATACCAAGGTCCGAGATCAAAACTTATTTTCAAAAGCAAGTGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATATAG

Coding sequence (CDS)

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTTCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCGGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGACCGTTGCACCAGAAAAACGGTTCATACCAAGGTCCGAGATCAAAACTTATTTTCAAAAGCAAGTGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATATAG

Protein sequence

MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSI
Homology
BLAST of PI0021785 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.5e-52
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMD G+TTV +S+++SSGI I 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIR 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S  ESSTPPRPS NL+ P G + QMR  ASP S  ESST PTTYSQ V P+K+F+PR EI
Sbjct: 61  SPMESSTPPRPSVNLIHPFGEVIQMRSSASPSSNRESSTLPTTYSQAVTPDKQFVPRIEI 120

Query: 121 KTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL 180
           K+YFQK +      ++  + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLL
Sbjct: 121 KSYFQKPIVIYDPIIELEYQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLL 180

Query: 181 STAVNASTSSKSASSSI 196
           STAVN S+SSK A S I
Sbjct: 181 STAVNTSSSSKPAPSFI 197

BLAST of PI0021785 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.2e-41
Identity = 113/189 (59.79%), Postives = 123/189 (65.08%), Query Frame = 0

Query: 7   RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESSTESSTP 66
           RGR +STSSKG+RPSSS N  PSPMSADQYAMD GFTTVTRS++RSS IRI S TESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67  PRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEIKTYFQKQV 126
           P+PS NL+RPSGG+ QMR P SP S  +SSTPPTTYSQ V P+KR               
Sbjct: 69  PKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR--------------- 128

Query: 127 HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNAST 186
                                           SKLLAALAQATTDADFQRLLST VNAS+
Sbjct: 129 --------------------------------SKLLAALAQATTDADFQRLLSTTVNASS 150

Query: 187 SSKSASSSI 196
           SSKS SSSI
Sbjct: 189 SSKSPSSSI 150

BLAST of PI0021785 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.8e-39
Identity = 94/128 (73.44%), Postives = 106/128 (82.81%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MD GFTTV RS++RSS IR E
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TESSTPPRP ANL+RPSG + QMRPPASP S  ESSTPPTTYSQ V P+KRF+PR +I
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KTYFQKQV 127
           K+YFQK +
Sbjct: 121 KSYFQKPI 128

BLAST of PI0021785 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-38
Identity = 93/128 (72.66%), Postives = 104/128 (81.25%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMD GFTTVTR  +RS GI I 
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TESSTPPRPS NL+RPS G+ QMRPPASP S  ESSTPPTTYSQ V P+KRF+PR EI
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KTYFQKQV 127
           K+YFQK +
Sbjct: 121 KSYFQKPI 128

BLAST of PI0021785 vs. ExPASy TrEMBL
Match: A0A5A7UFZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1248G00100 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 9.2e-38
Identity = 98/163 (60.12%), Postives = 120/163 (73.62%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM  GFTT+T+SK+RSSGIRI 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNRPSSSSNFAPSPMSVDQYAMHLGFTTLTQSKSRSSGIRIG 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TES TPPRP ANL+RPSG + QMR P SPLS  ESSTPPTTYSQ V P+KRF+PR EI
Sbjct: 61  SPTESLTPPRPLANLIRPSGKVVQMRFPTSPLSNRESSTPPTTYSQAVTPDKRFVPRLEI 120

Query: 121 KTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKL 162
           K+YFQK        ++  +  +  +Q+ +++ + E+  D S L
Sbjct: 121 KSYFQKPTVVYDPIIEPGYQTSSSIQEDEEQVDPEYDLDDSFL 163

BLAST of PI0021785 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMD G+TTV +S+++SSGI I 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIR 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S  ESSTPPRPS NL+ P G + QMR  ASP S  ESST PTTYSQ V P+K+F+PR EI
Sbjct: 61  SPMESSTPPRPSVNLIHPFGEVIQMRSSASPSSNRESSTLPTTYSQAVTPDKQFVPRIEI 120

Query: 121 KTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL 180
           K+YFQK +      ++  + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLL
Sbjct: 121 KSYFQKPIVIYDPIIELEYQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLL 180

Query: 181 STAVNASTSSKSASSSI 196
           STAVN S+SSK A S I
Sbjct: 181 STAVNTSSSSKPAPSFI 197

BLAST of PI0021785 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 113/189 (59.79%), Postives = 123/189 (65.08%), Query Frame = 0

Query: 7   RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESSTESSTP 66
           RGR +STSSKG+RPSSS N  PSPMSADQYAMD GFTTVTRS++RSS IRI S TESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67  PRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEIKTYFQKQV 126
           P+PS NL+RPSGG+ QMR P SP S  +SSTPPTTYSQ V P+KR               
Sbjct: 69  PKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR--------------- 128

Query: 127 HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNAST 186
                                           SKLLAALAQATTDADFQRLLST VNAS+
Sbjct: 129 --------------------------------SKLLAALAQATTDADFQRLLSTTVNASS 150

Query: 187 SSKSASSSI 196
           SSKS SSSI
Sbjct: 189 SSKSPSSSI 150

BLAST of PI0021785 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 5.9e-39
Identity = 94/128 (73.44%), Postives = 106/128 (82.81%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MD GFTTV RS++RSS IR E
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TESSTPPRP ANL+RPSG + QMRPPASP S  ESSTPPTTYSQ V P+KRF+PR +I
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KTYFQKQV 127
           K+YFQK +
Sbjct: 121 KSYFQKPI 128

BLAST of PI0021785 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 93/128 (72.66%), Postives = 104/128 (81.25%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMD GFTTVTR  +RS GI I 
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TESSTPPRPS NL+RPS G+ QMRPPASP S  ESSTPPTTYSQ V P+KRF+PR EI
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KTYFQKQV 127
           K+YFQK +
Sbjct: 121 KSYFQKPI 128

BLAST of PI0021785 vs. NCBI nr
Match: KAA0053156.1 (hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-37
Identity = 98/163 (60.12%), Postives = 120/163 (73.62%), Query Frame = 0

Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM  GFTT+T+SK+RSSGIRI 
Sbjct: 1   MSSKKGSARGRTNSTSSKGNRPSSSSNFAPSPMSVDQYAMHLGFTTLTQSKSRSSGIRIG 60

Query: 61  SSTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQTVAPEKRFIPRSEI 120
           S TES TPPRP ANL+RPSG + QMR P SPLS  ESSTPPTTYSQ V P+KRF+PR EI
Sbjct: 61  SPTESLTPPRPLANLIRPSGKVVQMRFPTSPLSNRESSTPPTTYSQAVTPDKRFVPRLEI 120

Query: 121 KTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKL 162
           K+YFQK        ++  +  +  +Q+ +++ + E+  D S L
Sbjct: 121 KSYFQKPTVVYDPIIEPGYQTSSSIQEDEEQVDPEYDLDDSFL 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BI616.5e-5264.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8A05.2e-4159.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CKX12.8e-3973.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TM805.4e-3872.66Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7UFZ99.2e-3860.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYJ98361.11.3e-5164.97hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa][more]
KAA0049709.11.1e-4059.79hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa][more]
TYK11076.15.9e-3973.44hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa][more]
KAA0043136.11.1e-3772.66putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative... [more]
KAA0053156.11.9e-3760.12hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021785.1PI0021785.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding