PI0006272 (gene) Melon (PI 482460) v1

Overview


Name	PI0006272
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NHL domain protein
Location	chr12: 2357434 .. 2358546 (-)
RNA-Seq Expression	PI0006272
Synteny	PI0006272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGGATAATTCAACCACCGGCTAACAAACACTGGGCCCCCTCACTTTACCGGCAGTCTCCGGTCACCCACCGTTGGCTCTATATACAATACTGTTATTCTTTTCTGTAAACCCTAATCTCTCTCTCTCTCTCTCTCTCTCTCTTCGGCCATGGGAGACCGAGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGTTTCCCTTGCTTTGGACCTCGTGGGTCGGGTTCCGATGACCTTTCATGGTGGGAACGGGTAAAGACGAAAGCAAAATCCACGAAGTTTGACGGCGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACATTTATTCGCCGGTTCAATAGGAACCGTCCGGCTACTGTGAAGCTTGGGAAATTTCAATATGATCCTATAAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGCGGATTTCGAAGGGGATGAATACAGTGGTGGTGGGTTTCAAAACTTCTCAGACAGGTTTGCTGCCGTGCCCGCGCCTGTGAAATTGTCTTCTTCTGCGGCGGTGAATGGTTAGGATACGGCGGCAGTGGAGATGGTCTTGTTTTCTCCGGTGAAGTTGAACGGGCGGTTGCCGTCGTGTACTGGAATTTAACGTATATTTTTCAACTGATGAGCTGGAAGTTGACCGTTTGCGGTGAAGTAGGAGGCGCCAATGGCGGCGATACGCGTGTTAAAGATGATAGTTTACTATTTTTTTAATGGGTGACGTGTAGCTAAATGATTGGTGTTCATATTCTTATAGTTGATATAATTTTTGTTTTATTTTTTCTCCAAGTAAATTGTATAATTCCAAATTTCTCACATAGTTTTATTTATATAAACTCTTATTATCGATAGAGTGTGTATTTATTCTCTCTTTCTTTTTGGGTTAGTTTTCTTTAAACGAAAGAAATCGAGTTAGGTAGTATGTATTATTCCAATTAAATTATTGTTGTTGTAAAATGTATATGGTTGGAATTAAAGGTTATTATATTATTGTTTTAA

mRNA sequence

TTTCGGATAATTCAACCACCGGCTAACAAACACTGGGCCCCCTCACTTTACCGGCAGTCTCCGGTCACCCACCGTTGGCTCTATATACAATACTGTTATTCTTTTCTGTAAACCCTAATCTCTCTCTCTCTCTCTCTCTCTCTCTTCGGCCATGGGAGACCGAGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGTTTCCCTTGCTTTGGACCTCGTGGGTCGGGTTCCGATGACCTTTCATGGTGGGAACGGGTAAAGACGAAAGCAAAATCCACGAAGTTTGACGGCGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACATTTATTCGCCGGTTCAATAGGAACCGTCCGGCTACTGTGAAGCTTGGGAAATTTCAATATGATCCTATAAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGCGGATTTCGAAGGGGATGAATACAGTGGTGGTGGGTTTCAAAACTTCTCAGACAGGTTTGCTGCCGTGCCCGCGCCTGTGAAATTGTCTTCTTCTGCGGCGGTGAATGGTTAGGATACGGCGGCAGTGGAGATGGTCTTGTTTTCTCCGGTGAAGTTGAACGGGCGGTTGCCGTCGTGTACTGGAATTTAACGTATATTTTTCAACTGATGAGCTGGAAGTTGACCGTTTGCGGTGAAGTAGGAGGCGCCAATGGCGGCGATACGCGTGTTAAAGATGATAGTTTACTATTTTTTTAATGGGTGACGTGTAGCTAAATGATTGGTGTTCATATTCTTATAGTTGATATAATTTTTGTTTTATTTTTTCTCCAAGTAAATTGTATAATTCCAAATTTCTCACATAGTTTTATTTATATAAACTCTTATTATCGATAGAGTGTGTATTTATTCTCTCTTTCTTTTTGGGTTAGTTTTCTTTAAACGAAAGAAATCGAGTTAGGTAGTATGTATTATTCCAATTAAATTATTGTTGTTGTAAAATGTATATGGTTGGAATTAAAGGTTATTATATTATTGTTTTAA

Coding sequence (CDS)

ATGGGAGACCGAGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGTTTCCCTTGCTTTGGACCTCGTGGGTCGGGTTCCGATGACCTTTCATGGTGGGAACGGGTAAAGACGAAAGCAAAATCCACGAAGTTTGACGGCGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACATTTATTCGCCGGTTCAATAGGAACCGTCCGGCTACTGTGAAGCTTGGGAAATTTCAATATGATCCTATAAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGCGGATTTCGAAGGGGATGAATACAGTGGTGGTGGGTTTCAAAACTTCTCAGACAGGTTTGCTGCCGTGCCCGCGCCTGTGAAATTGTCTTCTTCTGCGGCGGTGAATGGTTAG

Protein sequence

MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAVNG

Homology

[Close]

BLAST of PI0006272 vs. ExPASy TrEMBL
Match: A0A0A0LU30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045950 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.0e-83
Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF 120
            ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF
Sbjct: 61  SEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF 120

Query: 121 DEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           DEGHNGD DF+GDEY +GGGFQNFSDRFAA+ PAPVK SSSAAVNG
Sbjct: 121 DEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG 166

[Close]

BLAST of PI0006272 vs. ExPASy TrEMBL
Match: A0A5A7ULQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00570 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120
           GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           EGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of PI0006272 vs. ExPASy TrEMBL
Match: A0A5D3BLD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003520 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120
           GEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGRIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           EGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of PI0006272 vs. ExPASy TrEMBL
Match: A0A1S3AWF8 (uncharacterized protein LOC103483378 OS=Cucumis melo OX=3656 GN=LOC103483378 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120
           GEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGRIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           EGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of PI0006272 vs. ExPASy TrEMBL
Match: A0A6J1KJ01 (uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.7e-75
Identity = 141/164 (85.98%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 1   MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKST 60
           MGDRDG FKE+ES   IDGADALLAS+RYSCFCFPCFG   S SD+LSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV 162
           NFDEGHNGD +FEGDEYS GGFQNFSDRF+AVPA  K SS AAV
Sbjct: 121 NFDEGHNGDVNFEGDEYS-GGFQNFSDRFSAVPASAK-SSGAAV 162

[Close]

BLAST of PI0006272 vs. NCBI nr
Match: XP_038894780.1 (uncharacterized protein LOC120083201 [Benincasa hispida])

HSP 1 Score: 322.0 bits (824), Expect = 2.9e-84
Identity = 151/166 (90.96%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKST 60
           MGDRDGAFKELES   IDGADALLASKRYSCFCFPCFGPR S SD++SWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDEVSWWERVKTKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAVNG 164
           NFD+GHNGD DF+GDEYSGGGFQNFSDRFAAVP PVK S + AVNG
Sbjct: 121 NFDDGHNGDVDFDGDEYSGGGFQNFSDRFAAVPTPVKSSGAPAVNG 166

[Close]

BLAST of PI0006272 vs. NCBI nr
Match: XP_011660353.1 (uncharacterized protein LOC105436380 [Cucumis sativus] >KGN64297.1 hypothetical protein Csa_013957 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF 120
            ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF
Sbjct: 61  SEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNF 120

Query: 121 DEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           DEGHNGD DF+GDEY +GGGFQNFSDRFAA+ PAPVK SSSAAVNG
Sbjct: 121 DEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG 166

[Close]

BLAST of PI0006272 vs. NCBI nr
Match: KAA0055216.1 (uncharacterized protein E6C27_scaffold80G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.0e-81
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120
           GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           EGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of PI0006272 vs. NCBI nr
Match: XP_008438207.1 (PREDICTED: uncharacterized protein LOC103483378 [Cucumis melo] >TYJ99145.1 uncharacterized protein E5676_scaffold248G003520 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFD 60
           MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120
           GEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGRIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG 164
           EGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of PI0006272 vs. NCBI nr
Match: XP_023519821.1 (uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.3e-75
Identity = 142/164 (86.59%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 1   MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKST 60
           MGDRDG FKE+ES   IDGADALLAS+RYSCFCFPCFG   S SD+LSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV 162
           NFDEGHNGD DFEGDEYS GGFQNFSDRF+AVPA  K SS AAV
Sbjct: 121 NFDEGHNGDVDFEGDEYS-GGFQNFSDRFSAVPASGK-SSGAAV 162

[Close]

BLAST of PI0006272 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 67/132 (50.76%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 28  CFCFPCF-GPRGSGSDDLSWWERVKT---KAKSTKFDGEDHWWTGGIRSLKKLREWSEIV 87
           C CFP F   R S +   S W R++T      S     E  WW   IR+  K+REWSEIV
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSEIV 79

Query: 88  AGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYALNFDEGHNGDADFEGDEYSG-GG 147
           AGPRWKTFIRRFNR+ P   +      KFQYDP+SY+LNFD+      D E DEY G GG
Sbjct: 80  AGPRWKTFIRRFNRD-PRRGRDWDASEKFQYDPLSYSLNFDD------DDEEDEYVGLGG 139

Query: 148 FQNFSDRFAAVP 151
            ++FS RFA+VP
Sbjct: 140 LRSFSTRFASVP 141

[Close]

BLAST of PI0006272 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23
Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFG-PRGSGSDDLSWWERVKTKAKSTKF 60
           MG       E+++ D     + +KR  CF  PC G  + SG +   WW+R++T     K 
Sbjct: 584 MGLESFPISEMDATDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRT---VDKL 643

Query: 61  DGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR------------NRPATVKLGK 120
           + ++ WW  G     K+REWSEIVAGP+WKTFIRRF R            NRP  V    
Sbjct: 644 EPDERWWVSG---WMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHV---S 703

Query: 121 FQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSS 159
           F+YD  SY+LNFD+G      FE DE+    ++++S RFAA   PV    S
Sbjct: 704 FRYDSWSYSLNFDDGKQ-TGHFE-DEFP---YRDYSMRFAAPSLPVSTKCS 740

[Close]

BLAST of PI0006272 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 62/181 (34.25%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCF-GPRGSGSDDLSWWERVKTKAKSTKF 60
           M  +     E+++ D     L +KR  CF  PC    + S      WW+R+ T     K 
Sbjct: 1   MSHQSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITT---VDKL 60

Query: 61  DGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR-------------------- 120
           + ++ WW   IR  +++REWSE+VAGPRWKT+IRRF R+                     
Sbjct: 61  EPDERWW---IRGWRRMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGA 120

Query: 121 --PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSS 159
               +   GKF+YD +SY+LNFD+G N    F+ DE+    ++++S RFAA   PV    
Sbjct: 121 MPNRSSDQGKFRYDQLSYSLNFDDG-NQTGHFD-DEFP---YRDYSMRFAAPSLPVSTKC 170

[Close]

BLAST of PI0006272 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-19
Identity = 50/109 (45.87%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 45  SWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATV- 104
           SWW+R+           E  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+      
Sbjct: 23  SWWQRIHRNNHQ-----EPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 82

Query: 105 --KLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVP 151
                KF+YDP+SY L+F++    D     DE   GG ++FS R+A+VP
Sbjct: 83  WDDSDKFRYDPVSYTLSFEDEDKDD----DDEAGVGGVRSFSMRYASVP 119

[Close]

BLAST of PI0006272 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 69  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG 126
           G   LK L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G +G
Sbjct: 59  GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDDGGDG 115

The following BLAST results are available for this feature:

BLAST of PI0006272 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU30	6.0e-83	92.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045950 PE=4 SV=1	[more]
A0A5A7ULQ3	1.5e-81	91.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLD0	1.2e-80	91.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AWF8	1.2e-80	91.02	uncharacterized protein LOC103483378 OS=Cucumis melo OX=3656 GN=LOC103483378 PE=...	[more]
A0A6J1KJ01	2.7e-75	85.98	uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035...	[more]

BLAST of PI0006272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894780.1	2.9e-84	90.96	uncharacterized protein LOC120083201 [Benincasa hispida]	[more]
XP_011660353.1	1.2e-82	92.17	uncharacterized protein LOC105436380 [Cucumis sativus] >KGN64297.1 hypothetical ...	[more]
KAA0055216.1	3.0e-81	91.62	uncharacterized protein E6C27_scaffold80G00570 [Cucumis melo var. makuwa]	[more]
XP_008438207.1	2.6e-80	91.02	PREDICTED: uncharacterized protein LOC103483378 [Cucumis melo] >TYJ99145.1 uncha...	[more]
XP_023519821.1	3.3e-75	86.59	uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0006272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62865.1	1.1e-23	50.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G14890.1	1.8e-23	39.18	NHL domain-containing protein	[more]
AT3G01430.1	3.8e-21	34.25	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	4.6e-19	45.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G25240.1	2.1e-08	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 15..158
None	No IPR available	PANTHER	PTHR47076:SF1	NHL DOMAIN PROTEIN	coord: 15..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006272.1	PI0006272.1	mRNA