PI0005036 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACAATACCGCGTAAAGGAAGTTTCCGAGGAGACCAAAGAGAAGAAGGATTTTTTCAAGCCACCATCAAAATTTTCATTCAATCAATTCATACACAAACCAAAATTCGTTGATCCGATCGTCCCTCTATTGAAATTGTGATTCATTCCTTTCAATTCAAATTTTGTTTCTACAATCCGATCGCCCGCCATGAGTTTTCTCTTCGGCAAGCGCAAGACTCCCGCCGGTAATTGCTCTCCGATCACTATTTTTCTCTCTTCCCGTGAATTTTCAGTTTCATTTGCTTTCAATTTCTTATAGTCCACTTCTTTCTGACTGAATTTTTTGATTCTGTTGCATTTAGTAGTTGTGGTAATTTGTTTCGATTCCTGGAGTTTATGGTTTAATTTGTAGTTGATCATAGCCTCTGCGAGATTGAAGTTCTTAATTTACCTACTATTGGAAGTTCATGTTACTAATCTGTTTACTGCATACAGATGCTGATTCAGTGTGAACTGTTAATACGATCTGCCGGTTCCTCTTATTTTTGTGGTTTGATTTCTAGATATTGAACCATACTTGATTTCGAATTGCTGATTGTCTTTGAAGAAATGGTTTGTTAATGCACGTGTTCTAAGCCAACTGCATTATTTAATTACAGATTTGGTATATCTACCTATGGTTTATAATTAGAATTTAGTTCTGCAGTTTGATGAGATTTTCCAATCCGGCTTGGATGCCGAGGCGTTAAAAGTAATAAACCATTTTAGCGTTTGAACTCTTAGAATTAGCAACAAATTAATCTGATTTATAAAGCTTGAGATATTGAGTTTATATCTCAATATTGTTATTTCTTTTTATCCCTGTTAAATTAAATATGAAATCGAGCTCGCATGTAAGGAGTTCTAAGAATTAATATGGAAACACAAACATCATAGTTTAATAGTTAAAAGAGTCTCTAGCTTAGGTTTGCTGTCATTGAACTATTAATTGTAGTAGTCAATCTCATAGCATCTGATGTTGTATACTTTATCGTGAATCCAGAACTCCTCCGGGAAAATAAGAGGATGTTGGACAAATCAATCAGAGAAATCGAAAGGGAGAGACAAGGTCTTCAAACACAAGAGAAGAAACTCATTGCAGAGATTAAGAAAAGTGCCAAGCAAGGGCAAATGGTGTGTATTCTTTAATTTTTCTATCTATAGTTCATATTTTATTTTGTGAGATTCCATTCTTATTTTGATTCCTTTCTTTTACTCAATGAAATTCTCTAAAGCTGGACAGTTGGTTCGTCATGGTTGGAAGGAGAATATTTCATGAATCAATAATATTTGGAAGGACTTATCTTAAACATGTATATATTACCTGATTTTTCTCATTCAACATGTATTTTTGTTATGTTGTTGATATAATATTGAATTTACCTTCACCCATCAGCTTAAGCTTTTGGGTTTATCGGTGATTTAACAATTTTCTTAGCTCTTCTTCTCTCTCTTTGACAATAAGTGTCATTTGGTGGTGTATATCATATTTGGAAGTGTCAAAGATGAAAACAAATAAGGGAAAAACATTATAACACACTTCAAATGCTCCACAATTTTTCTTTCTAGAATTACATCTCAATCTGATATGATATGATACTGTTGTAGGGAGCTGTGAAAGTGATGGCAAAAGATCTAGTAAGGACCAGGCACCAGATTGAAAAATTCTACAAACTTAAATCACAACTTCAGGGCGTATCTCTTAGAATTCAGGTACAATTTATTTCATGACTTGTTCTTTTCCATTTGTGCATCTCATATTTTTACAGCATTTTACATATTAGTTCTTGATAACTCAACATTTTTGTTTAATCCACTTTTTTAGACTTTGAAATCAACTCAAGCAATGGGAGAAGCAATGAAAGGAGTGACAAAAGCAATGGGACAAATGAATCGACAGATGAACTTACCGTCCCTGCAGAAGATTATGCAAGAATTTATGAAACAGAATGAAAAAATGGAACTGATGACTGAAGTGATGGAAGATGCCATTGATGATGCCTTGGAAGGAGATGAAGAAGAGGAAGAAACAGAAGAATTGGTCAGCCAAGTTCTTGATGAGATAGGAATTGACATGAACCAAGAGGTAACTTTTATCTTTAAAAAAACCCTGTGCAAGTATCAACCTCGCTTGAAATGGATAACTGATCTAACCATATTTTGTATTTGAATTCACAGCTCGTGAACGCACCGTCAACTGCTGTTGCTGCACCAGCAGCGAAGACGAAGGTTGCACAAGCAGAAGCAACGGGGAACGACGATGGTGGAATTGATAGCGATCTTCAAGCCAGGCTAGACAATTTAAGGAGAATGTAAATGTAAGATCTTCATTTCTTGTTTTATATTGATACCCTCCAACCTGACTAGAGCAAGGAGGGACCATTTATGCCACTGCCATAGACTTAATGCCATGATTTCCGACCTTGTTTTGGATTTATGAAAGAAATGGGAATGATCAATGTTCAAGTATAACTTTCTGACTGTATATACATTATATTGGTTTCTTTTTAGGCTTACAACGTGGAAATAGTTAGTTAGCTTGACTCTCTATTGTGTTTTGTTTCAATTTGATCTTTATATTTTTTTAGGATTTCTATACAACATGAAAATGTCCATCATGTTCAATTTCAATTTAGTCCTTATATTTTTTTAA TTACAATACCGCGTAAAGGAAGTTTCCGAGGAGACCAAAGAGAAGAAGGATTTTTTCAAGCCACCATCAAAATTTTCATTCAATCAATTCATACACAAACCAAAATTCGTTGATCCGATCGTCCCTCTATTGAAATTGTGATTCATTCCTTTCAATTCAAATTTTGTTTCTACAATCCGATCGCCCGCCATGAGTTTTCTCTTCGGCAAGCGCAAGACTCCCGCCGAACTCCTCCGGGAAAATAAGAGGATGTTGGACAAATCAATCAGAGAAATCGAAAGGGAGAGACAAGGTCTTCAAACACAAGAGAAGAAACTCATTGCAGAGATTAAGAAAAGTGCCAAGCAAGGGCAAATGGGAGCTGTGAAAGTGATGGCAAAAGATCTAGTAAGGACCAGGCACCAGATTGAAAAATTCTACAAACTTAAATCACAACTTCAGGGCGTATCTCTTAGAATTCAGACTTTGAAATCAACTCAAGCAATGGGAGAAGCAATGAAAGGAGTGACAAAAGCAATGGGACAAATGAATCGACAGATGAACTTACCGTCCCTGCAGAAGATTATGCAAGAATTTATGAAACAGAATGAAAAAATGGAACTGATGACTGAAGTGATGGAAGATGCCATTGATGATGCCTTGGAAGGAGATGAAGAAGAGGAAGAAACAGAAGAATTGGTCAGCCAAGTTCTTGATGAGATAGGAATTGACATGAACCAAGAGCTCGTGAACGCACCGTCAACTGCTGTTGCTGCACCAGCAGCGAAGACGAAGGTTGCACAAGCAGAAGCAACGGGGAACGACGATGGTGGAATTGATAGCGATCTTCAAGCCAGGCTAGACAATTTAAGGAGAATGTAAATGTAAGATCTTCATTTCTTGTTTTATATTGATACCCTCCAACCTGACTAGAGCAAGGAGGGACCATTTATGCCACTGCCATAGACTTAATGCCATGATTTCCGACCTTGTTTTGGATTTATGAAAGAAATGGGAATGATCAATGTTCAAGTATAACTTTCTGACTGTATATACATTATATTGGTTTCTTTTTAGGCTTACAACGTGGAAATAGTTAGTTAGCTTGACTCTCTATTGTGTTTTGTTTCAATTTGATCTTTATATTTTTTTAGGATTTCTATACAACATGAAAATGTCCATCATGTTCAATTTCAATTTAGTCCTTATATTTTTTTAA ATGAGTTTTCTCTTCGGCAAGCGCAAGACTCCCGCCGAACTCCTCCGGGAAAATAAGAGGATGTTGGACAAATCAATCAGAGAAATCGAAAGGGAGAGACAAGGTCTTCAAACACAAGAGAAGAAACTCATTGCAGAGATTAAGAAAAGTGCCAAGCAAGGGCAAATGGGAGCTGTGAAAGTGATGGCAAAAGATCTAGTAAGGACCAGGCACCAGATTGAAAAATTCTACAAACTTAAATCACAACTTCAGGGCGTATCTCTTAGAATTCAGACTTTGAAATCAACTCAAGCAATGGGAGAAGCAATGAAAGGAGTGACAAAAGCAATGGGACAAATGAATCGACAGATGAACTTACCGTCCCTGCAGAAGATTATGCAAGAATTTATGAAACAGAATGAAAAAATGGAACTGATGACTGAAGTGATGGAAGATGCCATTGATGATGCCTTGGAAGGAGATGAAGAAGAGGAAGAAACAGAAGAATTGGTCAGCCAAGTTCTTGATGAGATAGGAATTGACATGAACCAAGAGCTCGTGAACGCACCGTCAACTGCTGTTGCTGCACCAGCAGCGAAGACGAAGGTTGCACAAGCAGAAGCAACGGGGAACGACGATGGTGGAATTGATAGCGATCTTCAAGCCAGGCTAGACAATTTAAGGAGAATGTAA MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFMKQNEKMELMTEVMEDAIDDALEGDEEEEETEELVSQVLDEIGIDMNQELVNAPSTAVAAPAAKTKVAQAEATGNDDGGIDSDLQARLDNLRRM Homology
BLAST of PI0005036 vs. ExPASy Swiss-Prot
Match: Q9SKI2 (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98 Identity = 202/224 (90.18%), Postives = 213/224 (95.09%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy Swiss-Prot
Match: Q6IP52 (Charged multivesicular body protein 2a OS=Xenopus laevis OX=8355 GN=chmp2a PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57 Identity = 127/222 (57.21%), Postives = 170/222 (76.58%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy Swiss-Prot
Match: Q9DB34 (Charged multivesicular body protein 2a OS=Mus musculus OX=10090 GN=Chmp2a PE=1 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.6e-57 Identity = 130/226 (57.52%), Postives = 171/226 (75.66%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy Swiss-Prot
Match: Q6DFS6 (Charged multivesicular body protein 2a OS=Xenopus tropicalis OX=8364 GN=chmp2a PE=2 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.3e-57 Identity = 126/222 (56.76%), Postives = 169/222 (76.13%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy Swiss-Prot
Match: Q54DB1 (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=44689 GN=chmp2a2 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.3e-57 Identity = 123/194 (63.40%), Postives = 160/194 (82.47%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy TrEMBL
Match: A0A1S3BPQ1 (vacuolar protein sorting-associated protein 2 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103492353 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy TrEMBL
Match: A0A0A0LZI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595810 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.6e-107 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy TrEMBL
Match: A0A6J1D1W8 (vacuolar protein sorting-associated protein 2 homolog 1 OS=Momordica charantia OX=3673 GN=LOC111016599 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105 Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy TrEMBL
Match: A0A6J1HWL7 (vacuolar protein sorting-associated protein 2 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111467516 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.8e-105 Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of PI0005036 vs. ExPASy TrEMBL
Match: A0A6J1JL43 (vacuolar protein sorting-associated protein 2 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485577 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.8e-105 Identity = 217/223 (97.31%), Postives = 219/223 (98.21%), Query Frame = 0
BLAST of PI0005036 vs. NCBI nr
Match: XP_008450903.1 (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Cucumis melo]) HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-107 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of PI0005036 vs. NCBI nr
Match: XP_004144020.1 (vacuolar protein sorting-associated protein 2 homolog 1 [Cucumis sativus] >KGN66277.1 hypothetical protein Csa_006873 [Cucumis sativus]) HSP 1 Score: 397.5 bits (1020), Expect = 7.5e-107 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of PI0005036 vs. NCBI nr
Match: XP_038879802.1 (vacuolar protein sorting-associated protein 2 homolog 1 [Benincasa hispida]) HSP 1 Score: 395.2 bits (1014), Expect = 3.7e-106 Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of PI0005036 vs. NCBI nr
Match: XP_022147739.1 (vacuolar protein sorting-associated protein 2 homolog 1 [Momordica charantia]) HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105 Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of PI0005036 vs. NCBI nr
Match: XP_023516992.1 (vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.7 bits (1005), Expect = 4.1e-105 Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of PI0005036 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein ) HSP 1 Score: 360.1 bits (923), Expect = 1.2e-99 Identity = 202/224 (90.18%), Postives = 213/224 (95.09%), Query Frame = 0
BLAST of PI0005036 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 ) HSP 1 Score: 147.9 bits (372), Expect = 9.7e-36 Identity = 91/218 (41.74%), Postives = 141/218 (64.68%), Query Frame = 0
BLAST of PI0005036 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.7e-35 Identity = 89/220 (40.45%), Postives = 138/220 (62.73%), Query Frame = 0
BLAST of PI0005036 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein ) HSP 1 Score: 132.1 bits (331), Expect = 5.5e-31 Identity = 81/197 (41.12%), Postives = 124/197 (62.94%), Query Frame = 0
BLAST of PI0005036 vs. TAIR 10
Match: AT5G22950.1 (SNF7 family protein ) HSP 1 Score: 82.0 bits (201), Expect = 6.5e-16 Identity = 67/216 (31.02%), Postives = 120/216 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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