PI0010576.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0010576.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Kirola-like
Location	chr02: 18864798 .. 18865340 (+)
Sequence length	543
RNA-Seq Expression	PI0010576.1
Synteny	PI0010576.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGAGCTAGGTATCGATGAAACCCTAGAAGATCAAACACCTGTTGGAAACCCAACGGAGGACACAACTGTAATTAGTGTCGCTGTCGTCGATGCTCGGATTGGATTTGCAATGGACGAATTCTTCCGCCATTTTCAGACTACACCGGCCTTCCAAAATTCGGCAGTTTTTCAGTCGAATGCACCTTCACGCGTCGCCCACGCGCCACCGCTGGAGCAACACACGCCTGCCCTTTCTGGTCAGAAGCCGCCGGCCGATCCTTCCCTGCCACCTTTATCTTCATCCGTAGTCGCTAATGATTCCTACATGCCGTTTTATGTTCTGCCCTCTTTGTTCGTCCAGCCACCGCCGTTTCAGTCATCCAATCTGTATGCCCTTCCTTCCACTACCTCTGTTCCAAACCCTAACAAACATCCAGGGGTTGAGCATCCTCAAATCAAATCAACATTTGAAGTCGGAGAGTCTTCGACACATTCCAACCCTAACATACCTTCCTCTTCTTCGAGAGTAGCTCACCAGCAATTAGAGGGGCTTTGA

mRNA sequence

ATGGTATCAGAGCTAGGTATCGATGAAACCCTAGAAGATCAAACACCTGTTGGAAACCCAACGGAGGACACAACTGTAATTAGTGTCGCTGTCGTCGATGCTCGGATTGGATTTGCAATGGACGAATTCTTCCGCCATTTTCAGACTACACCGGCCTTCCAAAATTCGGCAGTTTTTCAGTCGAATGCACCTTCACGCGTCGCCCACGCGCCACCGCTGGAGCAACACACGCCTGCCCTTTCTGGTCAGAAGCCGCCGGCCGATCCTTCCCTGCCACCTTTATCTTCATCCGTAGTCGCTAATGATTCCTACATGCCGTTTTATGTTCTGCCCTCTTTGTTCGTCCAGCCACCGCCGTTTCAGTCATCCAATCTGTATGCCCTTCCTTCCACTACCTCTGTTCCAAACCCTAACAAACATCCAGGGGTTGAGCATCCTCAAATCAAATCAACATTTGAAGTCGGAGAGTCTTCGACACATTCCAACCCTAACATACCTTCCTCTTCTTCGAGAGTAGCTCACCAGCAATTAGAGGGGCTTTGA

Coding sequence (CDS)

ATGGTATCAGAGCTAGGTATCGATGAAACCCTAGAAGATCAAACACCTGTTGGAAACCCAACGGAGGACACAACTGTAATTAGTGTCGCTGTCGTCGATGCTCGGATTGGATTTGCAATGGACGAATTCTTCCGCCATTTTCAGACTACACCGGCCTTCCAAAATTCGGCAGTTTTTCAGTCGAATGCACCTTCACGCGTCGCCCACGCGCCACCGCTGGAGCAACACACGCCTGCCCTTTCTGGTCAGAAGCCGCCGGCCGATCCTTCCCTGCCACCTTTATCTTCATCCGTAGTCGCTAATGATTCCTACATGCCGTTTTATGTTCTGCCCTCTTTGTTCGTCCAGCCACCGCCGTTTCAGTCATCCAATCTGTATGCCCTTCCTTCCACTACCTCTGTTCCAAACCCTAACAAACATCCAGGGGTTGAGCATCCTCAAATCAAATCAACATTTGAAGTCGGAGAGTCTTCGACACATTCCAACCCTAACATACCTTCCTCTTCTTCGAGAGTAGCTCACCAGCAATTAGAGGGGCTTTGA

Protein sequence

MVSELGIDETLEDQTPVGNPTEDTTVISVAVVDARIGFAMDEFFRHFQTTPAFQNSAVFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQPPPFQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSSSRVAHQQLEGL

Homology

[Close]

BLAST of PI0010576.1 vs. ExPASy TrEMBL
Match: A0A1S4E325 (uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29
Identity = 87/176 (49.43%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDT------TVISVAVVDARIGFAMDEFFRHFQTTPAFQ 60
           MVSE   D+ L++ T  GN  E+T      T+ +V +VDARI  AMDE+F H QTT A  
Sbjct: 1   MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60

Query: 61  NSAVFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLF 120
             + F S A   VAH P      PA   Q  PA+PSLPPLSSS   N  ++P +VLP   
Sbjct: 61  IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120

Query: 121 VQPPP-FQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSS 170
           +QPP     SNLY +P T S  NP+ HP + +PQI STFEVGESS HSNPN+ +SS
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNVQASS 176

[Close]

BLAST of PI0010576.1 vs. ExPASy TrEMBL
Match: A0A5A7UBX6 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22
Identity = 81/184 (44.02%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISV---AVVDARIGFAMDEFFRHFQTTPAFQNSA 60
           MV E G++ETLE QT VGN TE+T+ I+V    V+DA IG AMDE   H           
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDESLLH----------- 60

Query: 61  VFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQP 120
                                                          +P YVLPS  V+P
Sbjct: 61  -----------------------------------------------VPLYVLPSTSVEP 120

Query: 121 PPFQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIP-SSSSRVAHQQ 180
            P   SNLY+LPST SVPNP+ H  VEHPQI STFEV ESSTH N ++P SSSS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVPTSSSSSIAHQQ 126

[Close]

BLAST of PI0010576.1 vs. ExPASy TrEMBL
Match: A0A5D3BES5 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21
Identity = 80/184 (43.48%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISV---AVVDARIGFAMDEFFRHFQTTPAFQNSA 60
           MV E G++ETLE QT VGN TE+T+ I+V    V+DA IG AMDE   H           
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDESHLH----------- 60

Query: 61  VFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQP 120
                                                          +P YVLPS  V+P
Sbjct: 61  -----------------------------------------------VPLYVLPSTSVEP 120

Query: 121 PPFQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIP-SSSSRVAHQQ 180
            P   SNLY+LPST SVPNP+ H  VEHPQI  TFEV ESS HSN ++P SSSS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVPTSSSSSIAHQQ 126

[Close]

BLAST of PI0010576.1 vs. ExPASy TrEMBL
Match: A0A5D3D636 (Ribokinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00050 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.9e-20
Identity = 73/174 (41.95%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISVAVVDARIGFAMDEFFRHFQTTPAFQNSAVFQ 60
           ++ EL ID+TL++ +  GN  E+    SV VVDA+I   MDE+FR  QTTP    S    
Sbjct: 239 VIMELDIDQTLDNTSLDGNQIEEIATQSVLVVDAQISATMDEWFRCLQTTPVNMIS---- 298

Query: 61  SNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQPPPF 120
                                       PSLPPLSSS + N  Y   +VLP   V+ P  
Sbjct: 299 ----------------------------PSLPPLSSSAIYNVLYTLLHVLPLNSVKLPLL 358

Query: 121 QSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSSSRVAH 175
             SNLY LP T S  N + H  VE+PQI S FEVGES TH NPN+ +SSS +A+
Sbjct: 359 LQSNLYVLPPTDSATNVSYHLEVENPQIHSRFEVGESLTHVNPNVQASSSNIAY 380

[Close]

BLAST of PI0010576.1 vs. ExPASy TrEMBL
Match: A0A5A7T9C0 (Ribokinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00820 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.9e-20
Identity = 73/174 (41.95%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISVAVVDARIGFAMDEFFRHFQTTPAFQNSAVFQ 60
           ++ EL ID+TL++ +  GN  E+    SV VVDA+I   MDE+FR  QTTP    S    
Sbjct: 247 VIMELDIDQTLDNTSLDGNQIEEIATQSVLVVDAQISATMDEWFRCLQTTPVNMIS---- 306

Query: 61  SNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQPPPF 120
                                       PSLPPLSSS + N  Y   +VLP   V+ P  
Sbjct: 307 ----------------------------PSLPPLSSSAIYNVLYTLLHVLPLNSVKLPLL 366

Query: 121 QSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSSSRVAH 175
             SNLY LP T S  N + H  VE+PQI S FEVGES TH NPN+ +SSS +A+
Sbjct: 367 LQSNLYVLPPTDSATNVSYHLEVENPQIHSRFEVGESLTHVNPNVQASSSNIAY 388

[Close]

BLAST of PI0010576.1 vs. NCBI nr
Match: XP_016902631.1 (PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-29
Identity = 87/176 (49.43%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDT------TVISVAVVDARIGFAMDEFFRHFQTTPAFQ 60
           MVSE   D+ L++ T  GN  E+T      T+ +V +VDARI  AMDE+F H QTT A  
Sbjct: 1   MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60

Query: 61  NSAVFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLF 120
             + F S A   VAH P      PA   Q  PA+PSLPPLSSS   N  ++P +VLP   
Sbjct: 61  IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120

Query: 121 VQPPP-FQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSS 170
           +QPP     SNLY +P T S  NP+ HP + +PQI STFEVGESS HSNPN+ +SS
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNVQASS 176

[Close]

BLAST of PI0010576.1 vs. NCBI nr
Match: KAA0053242.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 6.0e-22
Identity = 81/184 (44.02%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISV---AVVDARIGFAMDEFFRHFQTTPAFQNSA 60
           MV E G++ETLE QT VGN TE+T+ I+V    V+DA IG AMDE   H           
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDESLLH----------- 60

Query: 61  VFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQP 120
                                                          +P YVLPS  V+P
Sbjct: 61  -----------------------------------------------VPLYVLPSTSVEP 120

Query: 121 PPFQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIP-SSSSRVAHQQ 180
            P   SNLY+LPST SVPNP+ H  VEHPQI STFEV ESSTH N ++P SSSS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVPTSSSSSIAHQQ 126

[Close]

BLAST of PI0010576.1 vs. NCBI nr
Match: TYJ97637.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-21
Identity = 80/184 (43.48%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISV---AVVDARIGFAMDEFFRHFQTTPAFQNSA 60
           MV E G++ETLE QT VGN TE+T+ I+V    V+DA IG AMDE   H           
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDESHLH----------- 60

Query: 61  VFQSNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQP 120
                                                          +P YVLPS  V+P
Sbjct: 61  -----------------------------------------------VPLYVLPSTSVEP 120

Query: 121 PPFQSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIP-SSSSRVAHQQ 180
            P   SNLY+LPST SVPNP+ H  VEHPQI  TFEV ESS HSN ++P SSSS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVPTSSSSSIAHQQ 126

[Close]

BLAST of PI0010576.1 vs. NCBI nr
Match: KAA0037909.1 (ribokinase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-19
Identity = 73/174 (41.95%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISVAVVDARIGFAMDEFFRHFQTTPAFQNSAVFQ 60
           ++ EL ID+TL++ +  GN  E+    SV VVDA+I   MDE+FR  QTTP    S    
Sbjct: 247 VIMELDIDQTLDNTSLDGNQIEEIATQSVLVVDAQISATMDEWFRCLQTTPVNMIS---- 306

Query: 61  SNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQPPPF 120
                                       PSLPPLSSS + N  Y   +VLP   V+ P  
Sbjct: 307 ----------------------------PSLPPLSSSAIYNVLYTLLHVLPLNSVKLPLL 366

Query: 121 QSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSSSRVAH 175
             SNLY LP T S  N + H  VE+PQI S FEVGES TH NPN+ +SSS +A+
Sbjct: 367 LQSNLYVLPPTDSATNVSYHLEVENPQIHSRFEVGESLTHVNPNVQASSSNIAY 388

[Close]

BLAST of PI0010576.1 vs. NCBI nr
Match: TYK18986.1 (ribokinase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-19
Identity = 73/174 (41.95%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MVSELGIDETLEDQTPVGNPTEDTTVISVAVVDARIGFAMDEFFRHFQTTPAFQNSAVFQ 60
           ++ EL ID+TL++ +  GN  E+    SV VVDA+I   MDE+FR  QTTP    S    
Sbjct: 239 VIMELDIDQTLDNTSLDGNQIEEIATQSVLVVDAQISATMDEWFRCLQTTPVNMIS---- 298

Query: 61  SNAPSRVAHAPPLEQHTPALSGQKPPADPSLPPLSSSVVANDSYMPFYVLPSLFVQPPPF 120
                                       PSLPPLSSS + N  Y   +VLP   V+ P  
Sbjct: 299 ----------------------------PSLPPLSSSAIYNVLYTLLHVLPLNSVKLPLL 358

Query: 121 QSSNLYALPSTTSVPNPNKHPGVEHPQIKSTFEVGESSTHSNPNIPSSSSRVAH 175
             SNLY LP T S  N + H  VE+PQI S FEVGES TH NPN+ +SSS +A+
Sbjct: 359 LQSNLYVLPPTDSATNVSYHLEVENPQIHSRFEVGESLTHVNPNVQASSSNIAY 380

The following BLAST results are available for this feature:

BLAST of PI0010576.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010576.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E325	2.5e-29	49.43	uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=...	[more]
A0A5A7UBX6	2.9e-22	44.02	Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE...	[more]
A0A5D3BES5	1.4e-21	43.48	Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE...	[more]
A0A5D3D636	7.9e-20	41.95	Ribokinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15...	[more]
A0A5A7T9C0	7.9e-20	41.95	Ribokinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]

BLAST of PI0010576.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902631.1	5.1e-29	49.43	PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo]	[more]
KAA0053242.1	6.0e-22	44.02	kirola-like [Cucumis melo var. makuwa]	[more]
TYJ97637.1	3.0e-21	43.48	kirola-like [Cucumis melo var. makuwa]	[more]
KAA0037909.1	1.6e-19	41.95	ribokinase isoform X2 [Cucumis melo var. makuwa]	[more]
TYK18986.1	1.6e-19	41.95	ribokinase isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of PI0010576.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0010576	PI0010576	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010576.1-exon	PI0010576.1-exon-chr02:18864798..18865340	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010576.1-cds	PI0010576.1-cds-chr02:18864798..18865340	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0010576.1	PI0010576.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0008152	metabolic process