PI0028778 (gene) Melon (PI 482460) v1

Overview


Name	PI0028778
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 18041492 .. 18042346 (-)
RNA-Seq Expression	PI0028778
Synteny	PI0028778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTGGTAAATAACTTAGGATCGCATACCCATTTATTTGCTTTATACTTTTGAACGTATACTGCCTAGTAAGCACACACTTCACTTAACTGCATTGATAGAATTTCCCTTCGATCCTGGATCACCCCAGGAAACCTCTTGATCGCTTATACTTGGGCGAACAAGAGGAAAACTTGTGCGATAAGAATCACGATCGCCTAATCATCATGTTCACCATCGCGTACTTCTTGTTTGCGTGGTTACTCCGCGATCAACGACCAAACCATAATCCATAACTCTACTCCATTCCATTCTCTACCCATCATTCATCCTTCATCCATCCATATACCATATAATAAGAGTCAGAGAGCTTAATAGAAAAAATAACGACAAGATAAAGATTAGATATAAATTATCAATCAACCTAGATATAAATTATCAATCAACCTTTCCCTTATCTCATTGAGCAATTATGCATTAAGGCCGTGTCCGCGTTGAAGACTTTCCCAGCAATCGCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTCAATTGCATCATCAGTCTCCACAAGAACAAGCCTGAAGCCAGACGCCTCAAATCCACAAAGGATGGAAAAAGCGAGAAAGAGGATGATGAAGTGGAGATTGATGATGAAGAAGAGATGGAAAGTCCAACACCCATCCCACTTGTTCGCAAGAGGAAAAGCGAGGGAGAGGCCTTTGGATCCACAAAGCAAAAGAAACACAAGGCTAAGGATCCCATTGAACCTATTCCTCTTGCGATCGAGAGCCCTGCGAAGGTGAAAAAGACCAAGGCCACTAGACCGCCTTCACCCCGCAACCCCTTAAAGAGCCAAACCTCCCCATAA

mRNA sequence

ATGTCTCTTGCAATCGCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTCAATTGCATCATCAGTCTCCACAAGAACAAGCCTGAAGCCAGACGCCTCAAATCCACAAAGGATGGAAAAAGCGAGAAAGAGGATGATGAAGTGGAGATTGATGATGAAGAAGAGATGGAAAGTCCAACACCCATCCCACTTGTTCGCAAGAGGAAAAGCGAGGGAGAGGCCTTTGGATCCACAAAGCAAAAGAAACACAAGGCTAAGGATCCCATTGAACCTATTCCTCTTGCGATCGAGAGCCCTGCGAAGGTGAAAAAGACCAAGGCCACTAGACCGCCTTCACCCCGCAACCCCTTAAAGAGCCAAACCTCCCCATAA

Coding sequence (CDS)

ATGTCTCTTGCAATCGCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTCAATTGCATCATCAGTCTCCACAAGAACAAGCCTGAAGCCAGACGCCTCAAATCCACAAAGGATGGAAAAAGCGAGAAAGAGGATGATGAAGTGGAGATTGATGATGAAGAAGAGATGGAAAGTCCAACACCCATCCCACTTGTTCGCAAGAGGAAAAGCGAGGGAGAGGCCTTTGGATCCACAAAGCAAAAGAAACACAAGGCTAAGGATCCCATTGAACCTATTCCTCTTGCGATCGAGAGCCCTGCGAAGGTGAAAAAGACCAAGGCCACTAGACCGCCTTCACCCCGCAACCCCTTAAAGAGCCAAACCTCCCCATAA

Protein sequence

MSLAIAIKDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPLVRKRKSEGEAFGSTKQKKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQTSP

Homology

[Close]

BLAST of PI0028778 vs. ExPASy TrEMBL
Match: A0A5D3C0C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00060 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.5e-11
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 3   LAIAIKDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPI 62
           L   +KD +C+ITS++ +I+L+KNK E + LK TK+ +  KEDD++EID+EEE E  T  
Sbjct: 68  LKTMVKDEICTITSVSHMINLNKNKAEDKCLK-TKEIEKVKEDDKMEIDEEEEREDETLS 127

Query: 63  PLVRKRKSEGEAFGSTKQK-KHKAKDPIEPIPLA-IESPA 101
           PL+RK K E +AFGS K+K K KAKD  + +PLA I SPA
Sbjct: 128 PLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166

[Close]

BLAST of PI0028778 vs. ExPASy TrEMBL
Match: A0A0A0KTK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G406560 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.8e-08
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 14  ITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEID-DEEEMESPTPIPLVRKRKSEG 73
           +T LNC+I+LHKNK E +RLKS K  ++  E+ E+E+D DEEE E     PLV KRK + 
Sbjct: 1   MTGLNCMINLHKNKAERKRLKS-KKMETIVENKEMEVDNDEEEREKEKQTPLVHKRKGKD 60

Query: 74  EAFGSTKQ-KKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQT 122
           E  GS KQ KK +AK+  +P PLAI +P   + TK T   S ++P ++ T
Sbjct: 61  EGSGSKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTYSLS-KSPTRTPT 108

[Close]

BLAST of PI0028778 vs. ExPASy TrEMBL
Match: A0A5A7VJW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001290 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 8   KDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPLVRK 67
           KD +C ITSLNC+I LHKNK E + L   K  K +K D+E+EID EEE +     PLVRK
Sbjct: 49  KDEICIITSLNCMIRLHKNKSEDKSLNINKSKKFDK-DNEMEIDKEEEQDR---TPLVRK 108

Query: 68  RKSEGEAFGSTKQK-KHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKS 120
           RK +  A    K++ K  A +  +PI L I +    + T+ T  P P   LK+
Sbjct: 109 RKGKDNASKLKKREMKPIANESTDPISLGIVTSLVTQTTQTTISPLPSKMLKT 157

[Close]

BLAST of PI0028778 vs. ExPASy TrEMBL
Match: A0A5A7VKE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001180 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 5   IAIKDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPL 64
           + IKD +C+ ++L+ +I++HKNK   + LK+ + G+ E +   V+  DEEE      +PL
Sbjct: 76  LKIKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQIEVK--VVDDKDEEEESEEDNVPL 135

Query: 65  VRKRKSEGEAFGSTKQKKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQTS 123
             KR+ E EA GS K K  KAKD  + +P A  +  K KK   T  P      K++TS
Sbjct: 136 KCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTFSPIKSKFSKAKTS 191

[Close]

BLAST of PI0028778 vs. ExPASy TrEMBL
Match: A0A0A0LY93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G676915 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 20  IISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPLVRKRKSEGEAFGS-T 79
           +I+LHKNK + + LK TK  +   E+ EVEI+D+EEME     PL+ KRK   E   S  
Sbjct: 1   MINLHKNKAKNKHLK-TKKTEKVIENHEVEIEDDEEMEDEMQSPLICKRKGMEEVSRSRK 60

Query: 80  KQKKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQT 122
           K+KK KAKD   PIPL I +P  V+ T  T  P P   L   T
Sbjct: 61  KKKKSKAKDSRNPIPLVIINPPTVQTT--TTSPFPSKALNVTT 100

[Close]

BLAST of PI0028778 vs. NCBI nr
Match: KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 7.3e-11
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 3   LAIAIKDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPI 62
           L   +KD +C+ITS++ +I+L+KNK E + LK TK+ +  KEDD++EID+EEE E  T  
Sbjct: 68  LKTMVKDEICTITSVSHMINLNKNKAEDKCLK-TKEIEKVKEDDKMEIDEEEEREDETLS 127

Query: 63  PLVRKRKSEGEAFGSTKQK-KHKAKDPIEPIPLA-IESPA 101
           PL+RK K E +AFGS K+K K KAKD  + +PLA I SPA
Sbjct: 128 PLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166

[Close]

BLAST of PI0028778 vs. NCBI nr
Match: KGN51011.1 (hypothetical protein Csa_009225 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-08
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 14  ITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEID-DEEEMESPTPIPLVRKRKSEG 73
           +T LNC+I+LHKNK E +RLKS K  ++  E+ E+E+D DEEE E     PLV KRK + 
Sbjct: 1   MTGLNCMINLHKNKAERKRLKS-KKMETIVENKEMEVDNDEEEREKEKQTPLVHKRKGKD 60

Query: 74  EAFGSTKQ-KKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQT 122
           E  GS KQ KK +AK+  +P PLAI +P   + TK T   S ++P ++ T
Sbjct: 61  EGSGSKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTYSLS-KSPTRTPT 108

[Close]

BLAST of PI0028778 vs. NCBI nr
Match: KAA0067460.1 (hypothetical protein E6C27_scaffold40G001290 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-06
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 8   KDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPLVRK 67
           KD +C ITSLNC+I LHKNK E + L   K  K +K D+E+EID EEE +     PLVRK
Sbjct: 49  KDEICIITSLNCMIRLHKNKSEDKSLNINKSKKFDK-DNEMEIDKEEEQDR---TPLVRK 108

Query: 68  RKSEGEAFGSTKQK-KHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKS 120
           RK +  A    K++ K  A +  +PI L I +    + T+ T  P P   LK+
Sbjct: 109 RKGKDNASKLKKREMKPIANESTDPISLGIVTSLVTQTTQTTISPLPSKMLKT 157

[Close]

BLAST of PI0028778 vs. NCBI nr
Match: KAA0066896.1 (hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK27232.1 hypothetical protein E5676_scaffold236G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-04
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 5   IAIKDGLCSITSLNCIISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPL 64
           + IKD +C+ ++L+ +I++HKNK   + LK+ + G+ E +   V+  DEEE      +PL
Sbjct: 76  LKIKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQIEVK--VVDDKDEEEESEEDNVPL 135

Query: 65  VRKRKSEGEAFGSTKQKKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQTS 123
             KR+ E EA GS K K  KAKD  + +P A  +  K KK   T  P      K++TS
Sbjct: 136 KCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTFSPIKSKFSKAKTS 191

[Close]

BLAST of PI0028778 vs. NCBI nr
Match: KGN66753.1 (hypothetical protein Csa_007650 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 5.1e-04
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 20  IISLHKNKPEARRLKSTKDGKSEKEDDEVEIDDEEEMESPTPIPLVRKRKSEGEAFGS-T 79
           +I+LHKNK + + LK TK  +   E+ EVEI+D+EEME     PL+ KRK   E   S  
Sbjct: 1   MINLHKNKAKNKHLK-TKKTEKVIENHEVEIEDDEEMEDEMQSPLICKRKGMEEVSRSRK 60

Query: 80  KQKKHKAKDPIEPIPLAIESPAKVKKTKATRPPSPRNPLKSQT 122
           K+KK KAKD   PIPL I +P  V+ T  T  P P   L   T
Sbjct: 61  KKKKSKAKDSRNPIPLVIINPPTVQTT--TTSPFPSKALNVTT 100

The following BLAST results are available for this feature:

BLAST of PI0028778 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0C3	3.5e-11	53.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KTK5	2.8e-08	47.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G406560 PE=4 SV=1	[more]
A0A5A7VJW3	1.5e-06	43.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VKE9	1.9e-04	37.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LY93	2.4e-04	45.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G676915 PE=4 SV=1	[more]

BLAST of PI0028778 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058409.1	7.3e-11	53.00	hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047...	[more]
KGN51011.1	5.8e-08	47.27	hypothetical protein Csa_009225 [Cucumis sativus]	[more]
KAA0067460.1	3.2e-06	43.36	hypothetical protein E6C27_scaffold40G001290 [Cucumis melo var. makuwa]	[more]
KAA0066896.1	3.9e-04	37.29	hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK2723...	[more]
KGN66753.1	5.1e-04	45.63	hypothetical protein Csa_007650 [Cucumis sativus]	[more]

BLAST of PI0028778 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028778.1	PI0028778.1	mRNA