PI0028584 (gene) Melon (PI 482460) v1

Overview


Name	PI0028584
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr03: 11305310 .. 11305939 (+)
RNA-Seq Expression	PI0028584
Synteny	PI0028584

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCTAAAGGCAACACTTCCAAAGCTCTAAGCGACATTAGCAAGAGGCCAAATACTCGCAGCCACTCAAAAGAGACTCAATCGTCTGAGGATATGCCACCTTTTGAGGTCACAAAGAATATTTGGGAACAACTGTCAAAGCCATCAAAACGTGGAATTATAATCAAAGAAAATCCTGTAATCGACGAACACATTTCGTCCTCTGAACACTCAAGTGGGGAGACACCTCACCCAAATATAATGTCAGTTATGGTGGCTGACGTGGATACAAGTGAAGACAAAATGACAGAGCTTGAAAGGAAGGTTAACATGCTCATGAAGGCAATTGAAGATAGGGATTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGACGATGCTGAATCAAGTCATACACATACCGTCAAGAATACTGACAAAGGGAAGGCAAATACAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAGCAGTTGCAGAGATGATAGCAAACTCCATCAAAACTCAATATGGTGGACCTGTGATAACTTGTAGAAATACAAGTTATTGTAGCCTTTTAAGCGAAGCAATGAAGTCAAAATGCGAAATAAATGATCAGAACGCATAA

mRNA sequence

ATGACGTCTAAAGGCAACACTTCCAAAGCTCTAAGCGACATTAGCAAGAGGCCAAATACTCGCAGCCACTCAAAAGAGACTCAATCGTCTGAGGATATGCCACCTTTTGAGGTCACAAAGAATATTTGGGAACAACTGTCAAAGCCATCAAAACGTGGAATTATAATCAAAGAAAATCCTGTAATCGACGAACACATTTCGTCCTCTGAACACTCAAGTGGGGAGACACCTCACCCAAATATAATGTCAGTTATGGTGGCTGACGTGGATACAAGTGAAGACAAAATGACAGAGCTTGAAAGGAAGGTTAACATGCTCATGAAGGCAATTGAAGATAGGGATTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGACGATGCTGAATCAAGTCATACACATACCGTCAAGAATACTGACAAAGGGAAGGCAAATACAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAGCAGTTGCAGAGATGATAGCAAACTCCATCAAAACTCAATATGGTGGACCTGTGATAACTTGTAGAAATACAAGTTATTGTAGCCTTTTAAGCGAAGCAATGAAGTCAAAATGCGAAATAAATGATCAGAACGCATAA

Coding sequence (CDS)

ATGACGTCTAAAGGCAACACTTCCAAAGCTCTAAGCGACATTAGCAAGAGGCCAAATACTCGCAGCCACTCAAAAGAGACTCAATCGTCTGAGGATATGCCACCTTTTGAGGTCACAAAGAATATTTGGGAACAACTGTCAAAGCCATCAAAACGTGGAATTATAATCAAAGAAAATCCTGTAATCGACGAACACATTTCGTCCTCTGAACACTCAAGTGGGGAGACACCTCACCCAAATATAATGTCAGTTATGGTGGCTGACGTGGATACAAGTGAAGACAAAATGACAGAGCTTGAAAGGAAGGTTAACATGCTCATGAAGGCAATTGAAGATAGGGATTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGACGATGCTGAATCAAGTCATACACATACCGTCAAGAATACTGACAAAGGGAAGGCAAATACAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAGCAGTTGCAGAGATGATAGCAAACTCCATCAAAACTCAATATGGTGGACCTGTGATAACTTGTAGAAATACAAGTTATTGTAGCCTTTTAAGCGAAGCAATGAAGTCAAAATGCGAAATAAATGATCAGAACGCATAA

Protein sequence

MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENPVIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASLKNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLNCIVVCSAVAEMIANSIKTQYGGPVITCRNTSYCSLLSEAMKSKCEINDQNA

Homology

[Close]

BLAST of PI0028584 vs. ExPASy TrEMBL
Match: A0A5A7U5H1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001620 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.2e-61
Identity = 131/185 (70.81%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH S SE S+ E P PNIMSVMV DVDTSED+M ELE+KVNMLMKA+E++D+EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSHTHT+KN +KGKA  ++S  +   +   +    + EMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

[Close]

BLAST of PI0028584 vs. ExPASy TrEMBL
Match: A0A5A7VAV4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00190 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.2e-61
Identity = 133/185 (71.89%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMVA+VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  +   +   +    + EMIA+SIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

[Close]

BLAST of PI0028584 vs. ExPASy TrEMBL
Match: A0A5D3CSH0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00190 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMV +VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLNCIVVCSA--VAEMIANSIKTQY 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  + +L  I   S   + EMIA+SIKTQY
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQ-NLTSIASLSVQQLQEMIASSIKTQY 180

Query: 181 GGPVIT 185
           GGP  T
Sbjct: 181 GGPAQT 185

[Close]

BLAST of PI0028584 vs. ExPASy TrEMBL
Match: A0A5A7T892 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001980 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMV +VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLNCIVVCSA--VAEMIANSIKTQY 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  + +L  I   S   + EMIA+SIKTQY
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQ-NLTSIASLSVQQLQEMIASSIKTQY 180

Query: 181 GGPVIT 185
           GGP  T
Sbjct: 181 GGPAQT 185

[Close]

BLAST of PI0028584 vs. ExPASy TrEMBL
Match: A0A5D3C4W1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00920 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.4e-60
Identity = 132/185 (71.35%), Postives = 147/185 (79.46%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSK LSDI KRPNT S S+E QS ED PPFEV KNIWEQ+SKP K GI+IKENP
Sbjct: 1   MTSQGNTSKDLSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH S SEHSS E  HPNIMSVMV DVDTSE++M ELE+KVNMLMK +E+RDYEIASL
Sbjct: 61  AIDEHYSFSEHSSEEMAHPNIMSVMVTDVDTSENRMVELEKKVNMLMKVVEERDYEIASL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  +   +   +    + EMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

[Close]

BLAST of PI0028584 vs. NCBI nr
Match: KAA0065303.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 133/185 (71.89%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMVA+VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  +   +   +    + EMIA+SIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

[Close]

BLAST of PI0028584 vs. NCBI nr
Match: KAA0050518.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 131/185 (70.81%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH S SE S+ E P PNIMSVMV DVDTSED+M ELE+KVNMLMKA+E++D+EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSHTHT+KN +KGKA  ++S  +   +   +    + EMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

[Close]

BLAST of PI0028584 vs. NCBI nr
Match: KAA0039098.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60
Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMV +VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLNCIVVCSA--VAEMIANSIKTQY 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  + +L  I   S   + EMIA+SIKTQY
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQ-NLTSIASLSVQQLQEMIASSIKTQY 180

Query: 181 GGPVIT 185
           GGP  T
Sbjct: 181 GGPAQT 185

[Close]

BLAST of PI0028584 vs. NCBI nr
Match: TYK14887.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60
Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSKALSDI KRPNTRS S+E QSSEDMPPFEV KNIWEQ+SKP K GI+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH SSS+ SS E PHPNIMSVMV +VDTSE++M ELE+KVNMLMK +E+RDYEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLNCIVVCSA--VAEMIANSIKTQY 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  + +L  I   S   + EMIA+SIKTQY
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQ-NLTSIASLSVQQLQEMIASSIKTQY 180

Query: 181 GGPVIT 185
           GGP  T
Sbjct: 181 GGPAQT 185

[Close]

BLAST of PI0028584 vs. NCBI nr
Match: KAA0041883.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK05406.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-60
Identity = 132/185 (71.35%), Postives = 147/185 (79.46%), Query Frame = 0


Query: 1   MTSKGNTSKALSDISKRPNTRSHSKETQSSEDMPPFEVTKNIWEQLSKPSKRGIIIKENP 60
           MTS+GNTSK LSDI KRPNT S S+E QS ED PPFEV KNIWEQ+SKP K GI+IKENP
Sbjct: 1   MTSQGNTSKDLSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHISSSEHSSGETPHPNIMSVMVADVDTSEDKMTELERKVNMLMKAIEDRDYEIASL 120
            IDEH S SEHSS E  HPNIMSVMV DVDTSE++M ELE+KVNMLMK +E+RDYEIASL
Sbjct: 61  AIDEHYSFSEHSSEEMAHPNIMSVMVTDVDTSENRMVELEKKVNMLMKVVEERDYEIASL 120

Query: 121 KNHIESRDDAESSHTHTVKNTDKGKANTRKSTTKFDLN-CIVVCSAVAEMIANSIKTQYG 180
           KNHIESRD AESSH HTVKNTDKGKA  ++S  +   +   +    + EMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPVIT 185
           GP  T
Sbjct: 181 GPAQT 185

The following BLAST results are available for this feature:

BLAST of PI0028584 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028584 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5H1	8.2e-61	70.81	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7VAV4	8.2e-61	71.89	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3CSH0	1.1e-60	72.58	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T892	1.1e-60	72.58	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C4W1	1.4e-60	71.35	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0028584 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065303.1	1.7e-60	71.89	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0050518.1	1.7e-60	70.81	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0039098.1	2.2e-60	72.58	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK14887.1	2.2e-60	72.58	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0041883.1	2.9e-60	71.35	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK05406.1 ty3-gyp...	[more]

BLAST of PI0028584 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028584.1	PI0028584.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity