Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAAAAGAAGAAAGGAACAAAGGAATCTCAGTGTTTTTCTCCTGCTCTTTAAACCACGGTTTCTTTGAAGAAGAGCTCAAATTGAACCTTTTCTCTTCAAAATGAAAACAGAGGAAGTGAAAGCAATGGGAATCTACAATCTTCTTCAAATCATGGTGAAAATTTTCCGATTCTCAGAGGTTTTAGTGGCAATAGGTTTTTTCATCTGGACATTTAGCCGCCTCCCTTTAGTCCTCAGAGTTTCGAGCGATTTCATTTCTCAAATCTCCAACTATTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACATCATCATCGTCTCTCTAATTGCCAAACCCCACAATTTCTCCGGCGGGAAAATAAACGGTGACAACGTCGAAACTGAGCTCTTTAATGAACTGGTAGAAGACGGCGCCGTTAGGTCTCTGTCTTTGGCTGGGAGTGAGGCAAATGAACGGCTCTGCTCCGATACAGAGCAAGAGGAGATCGCCTACGAAGACAAAGAGGTGATCTCAGAGGTGAGCTCGACTCGGGCGGCGGTATTTACCGAAAAAATGAAGGATTTCGGTTTGGAATCGGAGAAATTGAAGCTGGTATGGACGGAATTCGGTGGAGGAGAGTTGCGACGACTAAAAGCAGAGGAGGAAGCGATTTGGGGAAATGGGGTTTCGCCGGAAAGTGTAGGGAACGGGGAGGAGCTGAGTAATAAAGAATTTCAGCGAAGGATTGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGTTGGGAAGAATCCGGCGCCGTCGTCCTCCGAAGTTAA
mRNA sequence
AAAAAAAAAAAAAAAAAAGAAGAAAGGAACAAAGGAATCTCAGTGTTTTTCTCCTGCTCTTTAAACCACGGTTTCTTTGAAGAAGAGCTCAAATTGAACCTTTTCTCTTCAAAATGAAAACAGAGGAAGTGAAAGCAATGGGAATCTACAATCTTCTTCAAATCATGGTGAAAATTTTCCGATTCTCAGAGGTTTTAGTGGCAATAGGTTTTTTCATCTGGACATTTAGCCGCCTCCCTTTAGTCCTCAGAGTTTCGAGCGATTTCATTTCTCAAATCTCCAACTATTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACATCATCATCGTCTCTCTAATTGCCAAACCCCACAATTTCTCCGGCGGGAAAATAAACGGTGACAACGTCGAAACTGAGCTCTTTAATGAACTGGTAGAAGACGGCGCCGTTAGGTCTCTGTCTTTGGCTGGGAGTGAGGCAAATGAACGGCTCTGCTCCGATACAGAGCAAGAGGAGATCGCCTACGAAGACAAAGAGGTGATCTCAGAGGTGAGCTCGACTCGGGCGGCGGTATTTACCGAAAAAATGAAGGATTTCGGTTTGGAATCGGAGAAATTGAAGCTGGTATGGACGGAATTCGGTGGAGGAGAGTTGCGACGACTAAAAGCAGAGGAGGAAGCGATTTGGGGAAATGGGGTTTCGCCGGAAAGTGTAGGGAACGGGGAGGAGCTGAGTAATAAAGAATTTCAGCGAAGGATTGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGTTGGGAAGAATCCGGCGCCGTCGTCCTCCGAAGTTAA
Coding sequence (CDS)
ATGAAAACAGAGGAAGTGAAAGCAATGGGAATCTACAATCTTCTTCAAATCATGGTGAAAATTTTCCGATTCTCAGAGGTTTTAGTGGCAATAGGTTTTTTCATCTGGACATTTAGCCGCCTCCCTTTAGTCCTCAGAGTTTCGAGCGATTTCATTTCTCAAATCTCCAACTATTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACATCATCATCGTCTCTCTAATTGCCAAACCCCACAATTTCTCCGGCGGGAAAATAAACGGTGACAACGTCGAAACTGAGCTCTTTAATGAACTGGTAGAAGACGGCGCCGTTAGGTCTCTGTCTTTGGCTGGGAGTGAGGCAAATGAACGGCTCTGCTCCGATACAGAGCAAGAGGAGATCGCCTACGAAGACAAAGAGGTGATCTCAGAGGTGAGCTCGACTCGGGCGGCGGTATTTACCGAAAAAATGAAGGATTTCGGTTTGGAATCGGAGAAATTGAAGCTGGTATGGACGGAATTCGGTGGAGGAGAGTTGCGACGACTAAAAGCAGAGGAGGAAGCGATTTGGGGAAATGGGGTTTCGCCGGAAAGTGTAGGGAACGGGGAGGAGCTGAGTAATAAAGAATTTCAGCGAAGGATTGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGTTGGGAAGAATCCGGCGCCGTCGTCCTCCGAAGTTAA
Protein sequence
MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFTSPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANERLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKAEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS
Homology
BLAST of PI0006622 vs. ExPASy TrEMBL
Match:
A0A5A7SYQ4 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001910 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 4.1e-109
Identity = 213/233 (91.42%), Postives = 221/233 (94.85%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTE VKAMG+YNLLQ MVKIFRF+EVL A+GF IWTFSRLPLVL+VSSDFISQISNYFT
Sbjct: 1 MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN-VETELFNELVEDGAVRSLSLAGSEANE 120
SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN VETELFNELVEDGAV SLSLAGSE N
Sbjct: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120
Query: 121 RLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLK 180
RLCSDTEQE+IAYEDKEVISEV+STRAAVFTEKM++FGLESEKLKLVWTEFGGGELRRLK
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180
Query: 181 AEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
AEEEAIWG GVSPE VGN EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233
BLAST of PI0006622 vs. ExPASy TrEMBL
Match:
A0A1S3B3G2 (uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 4.1e-109
Identity = 213/233 (91.42%), Postives = 221/233 (94.85%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTE VKAMG+YNLLQ MVKIFRF+EVL A+GF IWTFSRLPLVL+VSSDFISQISNYFT
Sbjct: 1 MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN-VETELFNELVEDGAVRSLSLAGSEANE 120
SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN VETELFNELVEDGAV SLSLAGSE N
Sbjct: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120
Query: 121 RLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLK 180
RLCSDTEQE+IAYEDKEVISEV+STRAAVFTEKM++FGLESEKLKLVWTEFGGGELRRLK
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180
Query: 181 AEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
AEEEAIWG GVSPE VGN EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233
BLAST of PI0006622 vs. ExPASy TrEMBL
Match:
A0A0A0KM84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1)
HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 206/233 (88.41%), Postives = 218/233 (93.56%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKT EVKAMG+Y LLQIMVKIFRF+EVLVA+GF IWTFSRLPLVLRVSSDFISQISNYFT
Sbjct: 1 MKTVEVKAMGVYKLLQIMVKIFRFTEVLVAMGFLIWTFSRLPLVLRVSSDFISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGD-NVETELFNELVEDGAVRSLSLAGSEANE 120
SPVFGFILCNIIIVSLIAKPHNFS GKIN D NVET LFNELVEDGAV SLSLAGSE N
Sbjct: 61 SPVFGFILCNIIIVSLIAKPHNFSCGKINSDKNVETVLFNELVEDGAVTSLSLAGSEPNG 120
Query: 121 RLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLK 180
RLCSDTEQEEIAYEDKEVISEV+ST+ AVF+EKM+DFGLESEKLKL+W E+GGGELRR+K
Sbjct: 121 RLCSDTEQEEIAYEDKEVISEVTSTQTAVFSEKMEDFGLESEKLKLLWREYGGGELRRVK 180
Query: 181 AEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
AEEEAIWG GVS E VGNGEELSNKEF+RRIDAFIARELRFRWEESGAVVLR+
Sbjct: 181 AEEEAIWGGGVSREGVGNGEELSNKEFERRIDAFIARELRFRWEESGAVVLRN 233
BLAST of PI0006622 vs. ExPASy TrEMBL
Match:
A0A6J1IPH9 (uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644 PE=4 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 172/230 (74.78%), Postives = 194/230 (84.35%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTEEV+AMG+ + L+ ++K FRF+EV A+ +WTFSRLPL+LRVSSD+ISQIS YFT
Sbjct: 1 MKTEEVEAMGLSDHLRTLLKFFRFTEVFAAMALLVWTFSRLPLILRVSSDYISQISGYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
SPVFGF+LCN II++LIAKPH FSG K GDNVETEL NELV+DGA+ SLSL GSE N R
Sbjct: 61 SPVFGFMLCNTIIIALIAKPHRFSGEKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120
Query: 121 LCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKA 180
LCSD E EEIAYEDKEVISEVSST AA FTE+++DF SEKLKL W+EFGGGE R +
Sbjct: 121 LCSDVELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFERAEV 180
Query: 181 EEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 231
EEEAIWG GV PESV GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EEEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230
BLAST of PI0006622 vs. ExPASy TrEMBL
Match:
A0A6J1GFJ2 (uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC111453461 PE=4 SV=1)
HSP 1 Score: 328.2 bits (840), Expect = 2.8e-86
Identity = 170/230 (73.91%), Postives = 192/230 (83.48%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTEEV+AMG+ + L+ ++K RF+EV A+ F +WTFSRLPL+LRVSSD+ISQIS YFT
Sbjct: 1 MKTEEVEAMGLSDHLRTLLKFLRFTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
SPVFGF+LCN II++LIAKP FSGGK GDNVETEL NELV+DGA+ SLSL GS N R
Sbjct: 61 SPVFGFMLCNTIIIALIAKPPRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSGPNGR 120
Query: 121 LCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKA 180
LCSD E EEIAYEDKEVISEVSST AA FTE+++DF SEKLKL W+EFGGGE R +
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFCSGSEKLKLAWSEFGGGEFGRAEV 180
Query: 181 EEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 231
E EAIWG GV PESV GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EAEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230
BLAST of PI0006622 vs. NCBI nr
Match:
XP_008441123.1 (PREDICTED: uncharacterized protein LOC103485351 [Cucumis melo] >KAA0036210.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa] >TYK12605.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])
HSP 1 Score: 404.1 bits (1037), Expect = 8.4e-109
Identity = 213/233 (91.42%), Postives = 221/233 (94.85%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTE VKAMG+YNLLQ MVKIFRF+EVL A+GF IWTFSRLPLVL+VSSDFISQISNYFT
Sbjct: 1 MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN-VETELFNELVEDGAVRSLSLAGSEANE 120
SPVFGFILCNIIIVSLIAKPHNFSGGKINGDN VETELFNELVEDGAV SLSLAGSE N
Sbjct: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120
Query: 121 RLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLK 180
RLCSDTEQE+IAYEDKEVISEV+STRAAVFTEKM++FGLESEKLKLVWTEFGGGELRRLK
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180
Query: 181 AEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
AEEEAIWG GVSPE VGN EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233
BLAST of PI0006622 vs. NCBI nr
Match:
XP_011658494.1 (uncharacterized protein LOC105436032 [Cucumis sativus] >KGN48851.1 hypothetical protein Csa_002710 [Cucumis sativus])
HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 206/233 (88.41%), Postives = 218/233 (93.56%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKT EVKAMG+Y LLQIMVKIFRF+EVLVA+GF IWTFSRLPLVLRVSSDFISQISNYFT
Sbjct: 1 MKTVEVKAMGVYKLLQIMVKIFRFTEVLVAMGFLIWTFSRLPLVLRVSSDFISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGD-NVETELFNELVEDGAVRSLSLAGSEANE 120
SPVFGFILCNIIIVSLIAKPHNFS GKIN D NVET LFNELVEDGAV SLSLAGSE N
Sbjct: 61 SPVFGFILCNIIIVSLIAKPHNFSCGKINSDKNVETVLFNELVEDGAVTSLSLAGSEPNG 120
Query: 121 RLCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLK 180
RLCSDTEQEEIAYEDKEVISEV+ST+ AVF+EKM+DFGLESEKLKL+W E+GGGELRR+K
Sbjct: 121 RLCSDTEQEEIAYEDKEVISEVTSTQTAVFSEKMEDFGLESEKLKLLWREYGGGELRRVK 180
Query: 181 AEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
AEEEAIWG GVS E VGNGEELSNKEF+RRIDAFIARELRFRWEESGAVVLR+
Sbjct: 181 AEEEAIWGGGVSREGVGNGEELSNKEFERRIDAFIARELRFRWEESGAVVLRN 233
BLAST of PI0006622 vs. NCBI nr
Match:
XP_038882287.1 (uncharacterized protein LOC120073519 [Benincasa hispida])
HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98
Identity = 193/232 (83.19%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTE+VKAMG+YNLLQIMVKIFRF+EVLVA+GF WTFSRLPLVLRVS D+ISQISNYFT
Sbjct: 1 MKTEKVKAMGVYNLLQIMVKIFRFTEVLVAMGFLFWTFSRLPLVLRVSKDYISQISNYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
PVFGFILCN IIV+LIAKPH FSGGKI+ DNVETELFNELV+DGA RSLSL GSE R
Sbjct: 61 GPVFGFILCNTIIVALIAKPH-FSGGKISSDNVETELFNELVKDGADRSLSLPGSEPIGR 120
Query: 121 LCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKA 180
LCSD+ QEEIAYEDKEVISEV S +AA+FTEK DFG ESEKLKL W EF GGE RRL+A
Sbjct: 121 LCSDSGQEEIAYEDKEVISEVRSMKAAIFTEKRDDFGSESEKLKLAWMEFSGGEFRRLEA 180
Query: 181 EEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 233
EEEAIWG G SPESV +GEELSNKEFQRRIDAFIARELRFRWEESGAV+LRS
Sbjct: 181 EEEAIWGGGFSPESVWHGEELSNKEFQRRIDAFIARELRFRWEESGAVILRS 231
BLAST of PI0006622 vs. NCBI nr
Match:
KAG6603959.1 (hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 336.7 bits (862), Expect = 1.6e-88
Identity = 171/230 (74.35%), Postives = 195/230 (84.78%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTEEV+AMG+ + L+ ++K FR +EV A+ F +WTFSRLPL+LRVSSD+ISQIS YFT
Sbjct: 1 MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
SP+FGF+LCN II++LI+KPH FSGGK GDNVETEL NELV+DGA+ SLSL GSE N R
Sbjct: 61 SPIFGFMLCNTIIIALISKPHRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120
Query: 121 LCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKA 180
LCSD E EEIAYEDKEVISEVSST AA FTE+++DF SEKLKL W+EFGGGE R +
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEV 180
Query: 181 EEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 231
EEEAIWG GV PESV GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EEEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230
BLAST of PI0006622 vs. NCBI nr
Match:
XP_022977278.1 (uncharacterized protein LOC111477644 [Cucurbita maxima])
HSP 1 Score: 336.3 bits (861), Expect = 2.1e-88
Identity = 172/230 (74.78%), Postives = 194/230 (84.35%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
MKTEEV+AMG+ + L+ ++K FRF+EV A+ +WTFSRLPL+LRVSSD+ISQIS YFT
Sbjct: 1 MKTEEVEAMGLSDHLRTLLKFFRFTEVFAAMALLVWTFSRLPLILRVSSDYISQISGYFT 60
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
SPVFGF+LCN II++LIAKPH FSG K GDNVETEL NELV+DGA+ SLSL GSE N R
Sbjct: 61 SPVFGFMLCNTIIIALIAKPHRFSGEKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120
Query: 121 LCSDTEQEEIAYEDKEVISEVSSTRAAVFTEKMKDFGLESEKLKLVWTEFGGGELRRLKA 180
LCSD E EEIAYEDKEVISEVSST AA FTE+++DF SEKLKL W+EFGGGE R +
Sbjct: 121 LCSDVELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFERAEV 180
Query: 181 EEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 231
EEEAIWG GV PESV GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EEEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230
BLAST of PI0006622 vs. TAIR 10
Match:
AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 82.0 bits (201), Expect = 6.8e-16
Identity = 73/254 (28.74%), Postives = 124/254 (48.82%), Query Frame = 0
Query: 1 MKTEEVKAMGIYNLLQIMVKIFRFSEVLVAIGFFIWTFSRLPLVLRVSSDFISQISNYFT 60
+K E+ KA+ +N + + FR +EV VA+ F WTFS+LP V+++S F+ +I+ +
Sbjct: 9 VKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFLRRIAAVIS 68
Query: 61 SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNVETELFNELVEDGAVRSLSLAGSEANER 120
+P+F F+L N I+V L+ K + + + + ETE++ VRS+ ++E
Sbjct: 69 TPLFVFLLGNSIVVVLLTKSSDQTTTAV--ASAETEIYQAF-----VRSVENRSKPSDED 128
Query: 121 LCSDTEQEEIAYEDKEV---------------------ISEVSSTRAAVFTEKMKDF-GL 180
L E I Y+DK+V I SS + V+ D G
Sbjct: 129 L-----TEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGK 188
Query: 181 ESEKLKLVWTEFGGGELRRLKAEEEAIWGNGVSPESVGNGEELSNKEFQRRIDAFIAREL 233
+S + ++ + K +E + E ++LSN+EFQ+ I+AFIA++
Sbjct: 189 QSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQR 248
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SYQ4 | 4.1e-109 | 91.42 | Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS... | [more] |
A0A1S3B3G2 | 4.1e-109 | 91.42 | uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=... | [more] |
A0A0A0KM84 | 1.2e-105 | 88.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1 | [more] |
A0A6J1IPH9 | 1.0e-88 | 74.78 | uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644... | [more] |
A0A6J1GFJ2 | 2.8e-86 | 73.91 | uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC1114534... | [more] |
Match Name | E-value | Identity | Description | |
XP_008441123.1 | 8.4e-109 | 91.42 | PREDICTED: uncharacterized protein LOC103485351 [Cucumis melo] >KAA0036210.1 put... | [more] |
XP_011658494.1 | 2.5e-105 | 88.41 | uncharacterized protein LOC105436032 [Cucumis sativus] >KGN48851.1 hypothetical ... | [more] |
XP_038882287.1 | 3.9e-98 | 83.19 | uncharacterized protein LOC120073519 [Benincasa hispida] | [more] |
KAG6603959.1 | 1.6e-88 | 74.35 | hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022977278.1 | 2.1e-88 | 74.78 | uncharacterized protein LOC111477644 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT5G66440.1 | 6.8e-16 | 28.74 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |