PI0021438 (gene) Melon (PI 482460) v1

Overview
NamePI0021438
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 13377323 .. 13380306 (+)
RNA-Seq ExpressionPI0021438
SyntenyPI0021438
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCCTCTTCCTACTCCGCTCCCAAAACTCCGAATTCATGGTTTCATGAATTCATTTTCATTTTCAGAAGAAATGTAACTCTTAGTTTCTCTTTTTCAATCGGAGTCTCTCATCGCCGTATTCAATCGTAAACTCAATACAATCCGTTGCTTCCAAGTGTTCAAGAACTCGTTATCGACATCCTCACCGCCATGCTCAACAATCGGTGTTCCAATTAAGAGGTAATTTACTCTTGTTTTCTTCCTCTCGCTTTTCCTATTTCATTCCTACTTCCTATGTTGTATAGCAGCTCCTCTTAAATCCTCCATTCTTACGCTTTCTTTGATCTTTATCGCTGATTTTTTACCAAATCATGATCTATTTTGCTTCTAAATTTCAATTGAACAAAGCTTGTTGCTTGCTCTTTATCAGCTTCCTCTCCATCTTTCTTCAAGCCTTCTATTACATCTCTTATCTCAGCTCTGCCTCTGTCGAAATGTCGTTCATTATCGGTGAGAATACAATCTTCATTTTTCTTTCTTCATTTCCTTGTTTCAATCTTCGTTCAATAGGTTCGTTTTATCTTCCTTATTGCTTATGTCTTCCTACTGTTTGAGTAAATTACACAATGAAAAAAATACGAATATACTAGAAGAACTACGGAGGAAAAAAGCTCAGTTGTTTTAGTCTCTTGATTGAAAAGCTATGCTACTTTTAACTTGAGAATGTAATGAGTTGAAGATACTTTTTTCTATAGGGAGTATGAACAACTACTACGTTGAAAATATTATCCAATGCATATATTTCTTTGTTTCTCAAAATAGACCGCATGTATACAAATTAGTGCAGTATCGCTGCCTTCTCTACCTGAAACTTGTTGTCATGAACTCTCAATACTTTATAATATTGATTCTTGTTTCTTATACTTTTCTTGTTTATGGCAAATTAGCCTTATTATTTTGTAAAATTTTTAGGCCAATAGATAGTGTAGAACAATACCTTTGGATGGTGTGTATACTGCTTGTAACTTAAATCTATTGATCAAAGGATGATTTATCAAATTTCTGATGTACTGGAGTGGTTCCATTATTTGAACTTTTAACACTCTTTGCTCAGATAGTTTGGTGAAGTGGAAAATTCAACTTTGATCATAGCCCCTGCATGTGTTTTTCCTTTCTCTTTTTTTCTCATAAGATTTGTCATTCCTTTTTTTATTTAAGCCAAAAATGAGATTTTCTGTGATTATATAGTGAACCTATTTGATTTTAAATAGGATGGACACATTGTTTTGTTATAAAATATATGGAGATTATGTTATCTTTTGGTAACCACAGCATTTCAACCATCTATTTTCCACTTGATTGATTTTAGTTTCTAACTTTTAGCATTTTTAACGTGTAAAATTATTTAACAATTGTTCTATAAATTTTGTAGAATGTAGCTTGTACAATGTCATTTTGAATTTGTACCATGATGCTTACATTTGCACATTCAATCACTGCAGGCTTTTGGCTTCACTCATTAGTCTTCACGAGGTTTAGTGTCTCCGGACTAAGGTTTGTTTACTCCTCTGATGGTTCATAAAACTAATTTCTAGTCTCTTAGGATTGTTGCTAGTTACTTTTCTGATTGGCTTAAGCTTTCTCTTAATATTAAATTTTAGTTTTTTTTATTGTTAATCTACGAGTTCGACATTGTTTTTGTTTTCTAGTTGTAATTTTTTAAGGTTTTAATTGTAGCATATCTAGTAATTCATATCATTACTCTTTACAGGTAGAGGGGAAGCTGAAAGACTAGAAAAGTATAAAGCATTTGCATTCTACATTGAAGCTCAAGGTTAATAAAATTATACGTGGATTATTGTCTGGCAATTATAGCTCTCTTTTGGTTTTTTAATTTTTTCTGGATTGATGTTGTATATTTTGATATGATTTTGGGAACATATGGATTTTGTTCTTCCTACCATACTTAGACTTAGGGTTAATGACTGCTAGTATTTAATAAATTTAGGTATATAATTTCAGTCTTGAACTTTATCAGTACGGTTTGGATCAAGATTTGAAATTCTGTGTAGAGTCTCGGAGTGGCTCGAGAGTTGTGTATTTTGTATCGCAAAGTCTTTGTGGCAAGTAATTAGTATTTATTCATAACGTTGGATTTAATCTTTTGGTTTAGACACTTTTCATCTGGTCGATATAGTTTAGTGTGAGGGAGAGATGGGAACTTGAAAGAGTTTAGTTTTTGCATGAGTTCAATCCATGGTGGCCATCTACCTAAGAATTAATTTCCTATGAGATTCTTTGACACCCAAATGTTGTAGGGTCAGGTGGGTTGTTCCTTGAGATTAGTCGAGGTGCACGTAAACTGGCCCGAACACTCACGGATATAAAAAAAATATATATCTTTTTGGTTTAGACACTTTTCATCTGGTCGATATACTTTAGTGTGAGGGAGGGATGGGAACTTGAAGGAGTTTAGTTTCTGCTTTCTGTTTATAAATGATGGTTTATAAGCAATAGTAATACACTTCACATTCTGGTTGTTGTTATAGCTCCTTGAACCCACTTTGCATCTGGTTGAATGTCTCTTCTCTCTTCTCCACTTTAGCATCTCAATCTTTGTTTGCATTCATCATTCTTTATCTCCTTAATTCACCAATTTCTATGGAGAGTACTAGTTCAGGATTTGCTACAATCAATAAATCTCTATTTTGTACTAGGGAGATCAACCTAGAAATTAATACCGTATAGCCGATGAAAACATCTAAATTCTGATTGATCTTCTCTGTGCATCAATTGTTATGTTATTATTAAGTTTATCATTTTAACTTGGAGATTTCAGGTTCTTTTCCTGAGTCATGGAAGATCGTCAAGGCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCGATGAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAA

mRNA sequence

ATGTTGTTCCTCTTCCTACTCCGCTCCCAAAACTCCGAATTCATGTCTCTCATCGCCGTATTCAATCGTAAACTCAATACAATCCGTTGCTTCCAAGTGTTCAAGAACTCGTTATCGACATCCTCACCGCCATGCTCAACAATCGGTGTTCCAATTAAGAGCTTCCTCTCCATCTTTCTTCAAGCCTTCTATTACATCTCTTATCTCAGCTCTGCCTCTGTCGAAATGTCGTTCATTATCGGCTTTTGGCTTCACTCATTAGTCTTCACGAGGTTTAGTGTCTCCGGACTAAGCTTTCTCTTAATATTAAATTTTAGTAGAGGGGAAGCTGAAAGACTAGAAAAGTATAAAGCATTTGCATTCTACATTGAAGCTCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCGATGAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAA

Coding sequence (CDS)

ATGTTGTTCCTCTTCCTACTCCGCTCCCAAAACTCCGAATTCATGTCTCTCATCGCCGTATTCAATCGTAAACTCAATACAATCCGTTGCTTCCAAGTGTTCAAGAACTCGTTATCGACATCCTCACCGCCATGCTCAACAATCGGTGTTCCAATTAAGAGCTTCCTCTCCATCTTTCTTCAAGCCTTCTATTACATCTCTTATCTCAGCTCTGCCTCTGTCGAAATGTCGTTCATTATCGGCTTTTGGCTTCACTCATTAGTCTTCACGAGGTTTAGTGTCTCCGGACTAAGCTTTCTCTTAATATTAAATTTTAGTAGAGGGGAAGCTGAAAGACTAGAAAAGTATAAAGCATTTGCATTCTACATTGAAGCTCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAATGCTTCAATTCGGCCGATGAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAA

Protein sequence

MLFLFLLRSQNSEFMSLIAVFNRKLNTIRCFQVFKNSLSTSSPPCSTIGVPIKSFLSIFLQAFYYISYLSSASVEMSFIIGFWLHSLVFTRFSVSGLSFLLILNFSRGEAERLEKYKAFAFYIEAQEELQNVHYQRPKCFNSADEHSNGQSLGNWGNQTLSPGNKL
Homology
[Close]
BLAST of PI0021438 vs. ExPASy TrEMBL
Match: A0A0A0K3G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G103280 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.8e-34
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 76  MSFIIGFWLHSLVFTRFSVSGLSFLLILNFSRGEAERLEKYKAFAFYIEAQ--------- 135
           MSF IGFWLHSLVFTRFSVSGLSFLLILN  RGEAERLEK KAFAFYIEAQ         
Sbjct: 1   MSFHIGFWLHSLVFTRFSVSGLSFLLILN-CRGEAERLEKDKAFAFYIEAQVFFLRHGRS 60

Query: 136 ---EELQNVHYQRPKCFNSADEHSNGQSLGNWGNQTLSPGNKL 167
              EELQNVHYQRPKCFNSADEHSNGQSLGN GNQTLSPGNKL
Sbjct: 61  SRKEELQNVHYQRPKCFNSADEHSNGQSLGNRGNQTLSPGNKL 102

[Close]
BLAST of PI0021438 vs. NCBI nr
Match: XP_038896982.1 (uncharacterized protein LOC120085171 isoform X1 [Benincasa hispida])

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-06
Identity = 53/122 (43.44%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 38  LSTSSPPCSTIGVPIKSFLSIFLQAFYYISYLSSASVEMSFIIGFWLHSLVFTRFSVSGL 97
           LS SSPPCS   VPIKS L         +S L+S     SF+   +  SL     SV  L
Sbjct: 4   LSASSPPCSITSVPIKSLL--------IVSLLASRE---SFLDHRFKPSLT-PLISVQAL 63

Query: 98  S---FLLILNFSRGEAERLEKYKAFAFYIEAQEELQNVHYQRPKCFNSADEHSNGQSLGN 157
           S    + IL  + G + R             QEELQ +HYQRPK F+SAD HS+GQSLG 
Sbjct: 64  STCRSISILFLNHGRSSR-------------QEELQTIHYQRPKRFSSADHHSDGQSLGY 100

[Close]
BLAST of PI0021438 vs. NCBI nr
Match: XP_038896983.1 (uncharacterized protein LOC120085171 isoform X2 [Benincasa hispida])

HSP 1 Score: 58.5 bits (140), Expect = 6.2e-05
Identity = 43/90 (47.78%), Postives = 46/90 (51.11%), Query Frame = 0 

Query: 38  LSTSSPPCSTIGVPIKSFLSIFLQAFYYISYLSSASVEMSFIIGFWLHSLVFTRFSVSGL 97
           LS SSPPCS   VPIK      LQAF Y SYLSS S++M F I                 
Sbjct: 4   LSASSPPCSITSVPIK---RPSLQAFSYTSYLSSGSIDMPFHI----------------- 63

Query: 98  SFLLILNFSRGEAERLEKYKAFAFYIEAQE 128
                     GEAERL K KAFAFYIEAQ+
Sbjct: 64  ----------GEAERLGKEKAFAFYIEAQD 63

The following BLAST results are available for this feature:
BLAST of PI0021438 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021438 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3G36.8e-3483.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G103280 PE=4 SV=1[more]
BLAST of PI0021438 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038896982.11.5e-0643.44uncharacterized protein LOC120085171 isoform X1 [Benincasa hispida][more]
XP_038896983.16.2e-0547.78uncharacterized protein LOC120085171 isoform X2 [Benincasa hispida][more]
BLAST of PI0021438 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021438.1PI0021438.1mRNA