PI0008678 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAACAACAACGAAGTCCCTTTGAACAGAAACAACAATGTCGCCCTAGGACAAGACAACTCCATCCTCGTAGCCCATGACGTAAATAGACCCATCAGGGGGTACGCCTCGCCTAACTTGTATGATTTCAACCCTGGTATCACCTTCCCCGTCTTTGGCGCTAATGCCAGATTCGAGATGAAGTTGATCATGCTTCAGATAATCCAAACTATTGGTCAGTTCGGGGGACATCCAAAAGAAGACCCACATGACCACATTAAGAGTTTCTACTCAATTTGTTCCTCATTCCACATCTCCAATATTACACAAAAGGAGCTATGTTTTGCATTATTCCTGCTTACTCTGAGGGATGAGGTGAAATGATGGGCCAGATTGCTAGACGCATGGGAAATAACCACATGGACTCAGTTGGTACAAAAGTTCATGAGGAAATTTTTCCTTCCCCACAAGAATGTCAGGCAAAGGAGGGACATAATGAATTTTGAGCAGCAAGAAAGGGAAACCCTACATGATGCGTGGAATAGATATAAAAGGTTGATTAAGGCATACCTTCACAATGGCATACCTGATTGCATCCTAATGGAGGTGTTCTACACCGGGCTAAGCAAAGTAACACAGTAGGCTATTGATGCTGTATTTGTGGGTGGGATGTTGAAGAACATGTACACCCAGATTAAGACTATGCTGGACTCTATGGTCATCAACAATCAAGAATGAGAAGATAATGATTTTGGCTCTCACCATGGAAGGAGGCGAGGAAATGAAAAAGGAGTTGATAGAAATGCAGTAGTGGTTGTAAACCCTAGTTTCTAAGTATTTTGAAAGTTGAAAAGTTGTTGTGTTGTTGATGATTAGGTAGCCATGTTCAAGGAAAGGCAAATTGTTATTAAAGCTTAAATCACGGACAATCTCAAGGAAATTCGGGCAAGATTTAAGGAATCTCAGGCAAATTTTAAGAGTACACGGACAAAATTGGAACAAAAGTGAAATCCCGAGCTAATTTGGTGGATCTCGAGCGAGATGGAAGGAAAAAGCTTTAACCCTAGGCTAAACTTGGTGCTAGTCGATCGAGATGAAGAATAGAAAACATTGGAGTTGAGTTCTCGAACCATCTCAGGACCGAGTCCAATCGAGATTGCAAATAGAGAAAGGGATTTTAAAAGCTCTTGGGCCTTCCCGAGGCTGTGTTTGGTCGAGATTGGAGGTAGAGAGGTGGTCTGGGAAGGGGTGTGATAGTGGCATTGCAAGGACAGATTACCGCCATGAACAATCTACTGCAATCCATAGCGTTAACGCAAGTAAATGTTGCAAGATGATCTGTTCAAATGGTAAAACAAATGGAGGATATTGGACGTGTGGGATGCAGAGGTCCTCACAACACCGAGGCATGCCCACAAAACACTGAAACTATCGCGTTAGTATGAAACGATCCGTACTTCAACACTTACAACTCTAGTTGGAGGACCCATCCTAACTTTAGGATGGGGAGGAACGAGTCAACAACAACAAGGGCGACAAGGTGACCATGGTGGAGGACGTAACGAAGCATCTGACTATCGCCAAAGACACCATAACAATAGGTCACACAACCATCCACATCTTCAATATCAAGGCCACACTGCATCTTCATCATCATCATCATTATCATCATCATCATCCTTAATGGAGAACCTCCTCCAAGAGTACATGCAAAAAAATGATGCCCTTCTACAGAGCCAAACAATGTCTATTCGTAATTTAGAGTTACAAATAGGGTAAATTTTCAGTGATATCTCTAGAAGACCAAAGGGATTGATAACTTGTAGAAATACAAGTTATTGTAACCTTTTAGGTAGAATAATGAAGTCGTAATGCATCAAATAGAAAGAAAATGATATAATATGATAGATGTAGAGGATAAGTTGTATCGCAGAATGCAAAAGAGCTTTATTCTCGTTTTACACATTTTTCAAGATATATGCAGGTTTTATGCAAAAATAGAAGTACCCACGCGAGGAAAAAGTCAGGCGAGGAACCATGCGGACAATTAGGCGACTCACAACGCAAAGCAAGGCGATTCTAAGCACTAGCAGACAAACTAGTGTTGAAGACGTCAGAAAGGACATATGCGGCATCGCTGCAGCTTGGTCAGAAGAATTAATACCACCAAGTATCCTGTCACATCGCACCTCGCCTATAAATAGCGGTCACTTCTTTAATCACGGACATGCGAAAATCCGGAGAGCGAGTCCCATTCTTCCACTCTTTTCCTCTTTCTAG ATGAAAAACAACAACGAAGTCCCTTTGAACAGAAACAACAATGTCGCCCTAGGACAAGACAACTCCATCCTCGTAGCCCATGACGTAAATAGACCCATCAGGGGGTACGCCTCGCCTAACTTGTATGATTTCAACCCTGGTATCACCTTCCCCGTCTTTGGCGCTAATGCCAGATTCGAGATGAAGTTGATCATGCTTCAGATAATCCAAACTATTGGTCAGTTCGGGGGACATCCAAAAGAAGACCCACATGACCACATTAAGAGTTTCTACTCAATTTGTTCCTCATTCCACATCTCCAATATTACACAAAAGGAGCTATGTTTTGCATTATTCCTGCTTACTCTGAGGGATGAGGACCGAGTCCAATCGAGATTGCAAATAGAGAAAGGGATTTTAAAAGCTCTTGGGCCTTCCCGAGGCTGTGTTTGGTCGAGATTGGAGGTAGAGAGGTGGTCTGGGAAGGGGTGTGATAGTGGCATTGCAAGGACAGATTACCGCCATGAACAATCTACTGCAATCCATAGCGTTAACGCAAGATGGGGAGGAACGAGTCAACAACAACAAGGGCGACAAGGTGACCATGGTGGAGGACGTAACGAAGCATCTGACTATCGCCAAAGACACCATAACAATAGATATATGCAGAAGTACCCACGCGAGGAAAAAGTCAGGCGAGGAACCATGCGGACAATTAGGCGACTCACAACGCAAAGCAAGGCGATTCTAAGCACTAGCAGACAAACTAGTGTTGAAGACGTCAGAAAGGACATATGCGGCATCGCTGCAGCTTGGTCAGAAGAATTAATACCACCAAGTATCCTGTCACATCGCACCTCGCCTATAAATAGCGGTCACTTCTTTAATCACGGACATGCGAAAATCCGGAGAGCGAGTCCCATTCTTCCACTCTTTTCCTCTTTCTAG ATGAAAAACAACAACGAAGTCCCTTTGAACAGAAACAACAATGTCGCCCTAGGACAAGACAACTCCATCCTCGTAGCCCATGACGTAAATAGACCCATCAGGGGGTACGCCTCGCCTAACTTGTATGATTTCAACCCTGGTATCACCTTCCCCGTCTTTGGCGCTAATGCCAGATTCGAGATGAAGTTGATCATGCTTCAGATAATCCAAACTATTGGTCAGTTCGGGGGACATCCAAAAGAAGACCCACATGACCACATTAAGAGTTTCTACTCAATTTGTTCCTCATTCCACATCTCCAATATTACACAAAAGGAGCTATGTTTTGCATTATTCCTGCTTACTCTGAGGGATGAGGACCGAGTCCAATCGAGATTGCAAATAGAGAAAGGGATTTTAAAAGCTCTTGGGCCTTCCCGAGGCTGTGTTTGGTCGAGATTGGAGGTAGAGAGGTGGTCTGGGAAGGGGTGTGATAGTGGCATTGCAAGGACAGATTACCGCCATGAACAATCTACTGCAATCCATAGCGTTAACGCAAGATGGGGAGGAACGAGTCAACAACAACAAGGGCGACAAGGTGACCATGGTGGAGGACGTAACGAAGCATCTGACTATCGCCAAAGACACCATAACAATAGATATATGCAGAAGTACCCACGCGAGGAAAAAGTCAGGCGAGGAACCATGCGGACAATTAGGCGACTCACAACGCAAAGCAAGGCGATTCTAAGCACTAGCAGACAAACTAGTGTTGAAGACGTCAGAAAGGACATATGCGGCATCGCTGCAGCTTGGTCAGAAGAATTAATACCACCAAGTATCCTGTCACATCGCACCTCGCCTATAAATAGCGGTCACTTCTTTAATCACGGACATGCGAAAATCCGGAGAGCGAGTCCCATTCTTCCACTCTTTTCCTCTTTCTAG MKNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFALFLLTLRDEDRVQSRLQIEKGILKALGPSRGCVWSRLEVERWSGKGCDSGIARTDYRHEQSTAIHSVNARWGGTSQQQQGRQGDHGGGRNEASDYRQRHHNNRYMQKYPREEKVRRGTMRTIRRLTTQSKAILSTSRQTSVEDVRKDICGIAAAWSEELIPPSILSHRTSPINSGHFFNHGHAKIRRASPILPLFSSF Homology
BLAST of PI0008678 vs. ExPASy TrEMBL
Match: A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.8e-27 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of PI0008678 vs. ExPASy TrEMBL
Match: A0A5D3BVN1 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00390 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.8e-25 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 0
BLAST of PI0008678 vs. ExPASy TrEMBL
Match: A0A5A7TNS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00350 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.5e-23 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0
BLAST of PI0008678 vs. ExPASy TrEMBL
Match: A0A5A7UDN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00900 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.9e-22 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of PI0008678 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-14 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of PI0008678 vs. NCBI nr
Match: KAA0062403.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK26578.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-26 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of PI0008678 vs. NCBI nr
Match: TYK02149.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-24 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 0
BLAST of PI0008678 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 122.5 bits (306), Expect = 6.5e-24 Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of PI0008678 vs. NCBI nr
Match: KAA0045193.1 (hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa] >TYK27359.1 hypothetical protein E5676_scaffold325G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 7.1e-23 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0
BLAST of PI0008678 vs. NCBI nr
Match: KAA0051815.1 (hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa] >TYK21429.1 hypothetical protein E5676_scaffold609G00900 [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 6.0e-22 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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