PI0000205 (gene) Melon (PI 482460) v1

Overview
NamePI0000205
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Locationchr06: 13753603 .. 13761486 (+)
RNA-Seq ExpressionPI0000205
SyntenyPI0000205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGCCAGATGGATAAGGAAAGCGAATTTTTAATGTTGGTTGTCAACAACAGCGGGTCTTTAATGTCAGTTTTTGACTGACATTATAGGAAAACCTCATTTCTAAATCTTCCCACATTTGTGAATCCCTACTTCTGTGTTTCTTCTCTTCTTTCTTTCATGTCTCACGAAGTCTTCCACTGTTCACGATCTTCTCTCTCGTTTTCGGCTCCCACCTCACGTCTTCTTCTTCTTCCCTCACTTTTTCGGCTCTCACCTCTTCCTCTTCTTCTTCGTCAGGAGTATCTTTTCAAGATTGTTCCGATTGGCTACTCTGTGGTGGGGAAATCCAGCCTCCTTTCACAGTATATAACCTATCTTTCATAACAAAGTAAAACTTTTGCACACGGTGTGCTTTATTATATCCTACCTATGGTCAATGGGAGCTTTCTCAAGAATTTTGTCGTCCTGCTGCAGTCAAAGGTTGTCTTTATGTAAGTTCCGTTGAAAGTCTACAAAACCTCTCTCCACCAATATATAAAATGTCTTTTTTTTTTTCACGGAATGCCCTCAATTTTGTCTGTTTAATAGCATAACACATTATCATTCTTCTCCTACTTAATGTAGCAGTTTCATTTTTACATCTCTTAGAGATTGTTCAGTTCTGGGCTTACTTTCATTTTCCTGCATTATTATGAGTTGTTATAAAGATTGATCTCTGCATTGCTATGATTATTATTACCCGTGTTTTTGGGTGGATGAAAGAAACTGTTGAGGATTCATGACATAAACACTTTTTCGAGTGGCTTGATGCCATGTAGTCTATGCGACGATTTACACTGGTTTTAGGTTGATCTTTGGGAGTTGTGTGGTTATAAGCAGTTATTGTCCAAGACCTCCTATGGATCGAGGACCATTTGCTAAAGATCTTTCTTATTGTCGTATTTGTCTGGTCTGATTGCAAAAACCGTGTTTATTATTTTACTTGGTCAATCAACTTTTTTTCTTTATATATTAGATATGATGTCTTAATTAAAATATAAATGTTGCTCTCATTTTTCCTTTTCACTTCTGCTAAGTATCAAAGGGGCTATCCGATTCACCTTTGTATTTTTTTTCCATGATAAGGTTGGAATTTTTCTCTTATAATTAACTCATCTTTTGGTTGTACAGGTACTTCGGATGCCTGTCGTTGCTCTATTAAAGGACAAGGTTTAGAATGCACTAAACAACTCTTCCTTTGAGGTGAAAATGGATTGATCATATAGTACATCTTGAAATATTTGCAGAGTAATGAGCAATATAAGGGTGTTCAGTTGGCTTCTGAACAGAACATCTTTAGTCAACAGTTGGTTCTGGATTCGTGCTTCATGGATATAATATACTGCTACATTGTTTTGATATGGTACGTTCTCTTCCAATCTATAGGTTGTTTTACTCTTATGTTTGTTTGCAGACAATTTATGGAACTGAAACTAATTTCTTGCTTCGGTTTATTAGAATCTGTTGTTAGTTTGGTTAATCGATTCTCTGATTTGTTGGGAATGATAGAAAGAAAATTCAGTGTTATTGGTTATTCTGCAAATTCTGGTAGGAGAGCTAAGTTACCACTGTTTATTGTGTTATATTATGTTCTGTAACAATGTTTTTTTGGGTGATATACAACTTCCATAATTATTTTATTTATTGAGAGACATTTAATCATTACTTGTATAAAAGAATTGAATTGGAACACTTTTTGTAGCTCCATTTAGAAGAATGGTGTGTTTATCTAGTTTTGTGTATGAGTATCAAATACATAATATTTCTTTAAATTATATCTCTTGTTTTAGATCTTCAAGATGGGGAACTTATTCATGAGGATAACTTCAATATTTTTCCTTACATGTTTGCTTTTTCACAGTTTAATATATAAGAAAACTGATATGTGATGTTTACTTAATTCTTGATATTGGGGTGATATAACTCATTGATTCCTCTTGAATAATATTTGATGAGACGCTATCATATGTACAAACTATTGCCAACATCTTTGGCTTCAAGGTTATAGAGTAGGCAAGTTTTAGCTTCTGATTAATTGGCCATGAATTCAACTAATGTCCACTGCTTTCCATGTTTCAGTCAATCATTTAAACAATAAATTTGTGATGTGTCTTGCAGCATGTTGAGGAGATTGGAAAATACTTTGACTACAACTTGTGGTGGGTGATCCTTGCAACAGAGGAAATAATGATTCACGTAATAGTTCAAAGGTCCGAAAATGCATTGAACTTCTTTAATATATTTTTGTGAAAGGGATTGATTAGTATATATTTACATTTCCTCTAAGTTAGACAATAAGTTAGTCTAATTTATAATCTGAATAATGGTAGAAGAGTTTTACAACAATAGAACCAAGCTTGATCGTAGTAAAAGATTTGTTGATCATAGTAAAGGCTTAGTTACACAATTTTCAAGTGCTCAATCTCTTCTAGTTCTCCTTGTTAGTATAGTTGTTTATAAGTTCTCTTCTAGTTCTCTTCTAGTTTAATTCTTCAGGTTGCATTTTGGTAGTTGTAGGTTGAGCACTTGAACTAGTTCTTCAGGTTGCATTTTGGTAGTTGTAGGTTGAGCACTTGAACTAGAAGAGAACTAGAAGAGAACTAGAAGAGAACTTATAAACAACTATACTAACAAGGAGAACTAGAAGAGATTGAGCACTTGAAAATTGTGTAACTAAGCCTTTACTATGATCAACAAATCTTTTACTACGATCAAGCTTGGTTCTATTGTTGTAAAACTCTTCTACCATTATTCATATTATAAATTAGACTAACTTCTTGTCTAACTTAGAGGAAATGTAAATATATACTAATCAATCCCTTTCACAAAAATATATTAAAGAAGTTCAATGCATTTTCGGACCTTTGAACTATTACGTGAATCATTATTTCCTCAGTTGCAAGGATCACCCACCACAAGTTGTAGTCAAAGTATTTTCCAATCTCCTCAACATGCTGCAAGACACATCACAAATTTATTGTTTAAATGGTTGACTGAAACATGGAAAGCAGTGGACATTAGTTGAATTCATGGTATATACATCAACAAACAAAAGGGAGGACGAGGAACTGATATCCATACCTATTGCTAAATAAAAGCCTCCAGCTAAAAGGTTAGTTGAAATAAGAACTTGGTCAAACCATCCTTGGACACTTTTATTCATATTCCATAGTCAATTAATCAAACGGAGGAGCCGATCGATAATTATTAGTAATACTAAAAAAAAAAAATTGGTATGATTGATAACAATTGATAATTATTAAACTGATTTACGTTGAGTGTCTAGGTGACACACCTCCATCTGGTCACATGAAGTGACATCTACGGCGGAGCGTGACAACATCTATTAGTAATAACAACTATCACTGATAGCTTTCAATTTGAGAAATGATTATTTTGCAACGTTCTCGATTTTTTCACGTTGAAAGTTCTCACTAATGGCTACAATTAGTGAATATCACTGATAACGTTGTTATTGGTTGTTATCACTGATAGCTATTATCGATGATAACTTACCATCATTACGAGTGCTTTTTCCTGATTTTTCAAATTGAAAGATGTCATTGATAGCTAGCTATGAGTGATAGCAATTGATATTTGTTATACGTTGCTATCAATGATAACTTTGAATTTAAGAAATATACTATCAGTTGATGTCATTGATAACAGTTATCAGCGACAACTTCTATCATTGATAGCCATTGAATGGTAGACTAACTTTCAATTTGAGAAATATGGTATCAGTTGCTATAGTTAGCTGCTATCACTAATAGTTGTTATTATCAGTGATAGCTTTCAATGTGAGAAATGTGTTATCGGTTACTATCACTGATATCTTCTATTAGTGATGTTGCTATTAATTGGTATTCCTGATATAAGCTACTATAAGTAATTTTTCTATATTGCTATCAATGTAGAAGGATATTGCTAACATTATCTATCAATGATTACATTAGAAGGATATCGCTGATAACAACTATAAGTAATATCATTAGAAGAATATTTTTAATAAGTGATATTTCCTTGTTAAAAATATCGATTGTGATTTGATGATGTTTAATTAGGCTATCAATGATATTTCTTTTATAGCTACTATCGATGATATTCTTCTATTGTTATCACTAACAATATCTATTAGTGATAGCAATAGAAGGATATCATTGATAGCATCTATAAGTAATATTCCTAATAGGCTACTATATATCAATGATACCAAGGTAATGTTACTATAAAATGATATTGTGGTTGTTTGTTTTTTAGCATAAATGGACAAATAAAATAGATTAGATTAGCATACTATCGATAATAGCCTTGAATCACTGATTACATACTATCCATATGATAGCTTTTGTCACTGATAGTATAAATGAAATTGATATAGAAATTGATATAGTTACAACTTTTGTTGAAATAAATTATATATTGATTTCAGGCTATTGCTATCAACATTTATATCATTTAGAAATTCAAAGTTCAAGCTATATGTGATAGATTCATGAAAAACATATTGACATATTGGGCATGATGTCATTGATTGAAGTCATCATTGATAGCATGTTATCAGTGATAGAAGCCATCACTGGTAGCATAAGAAGAAAAGAAGTCAAGGAGAAGGAAATCAAAGGGCAAAATTGGTGTTGGTTTATTCCATAAATTTTTTATGCCAACAAAAAAACATAATCAACACATTGATTAAATAAAATCAAAAACTAATTTTGTTCTTTTTTTTTCCAAAACCCAAATCTCTCGCATCCTCTTCCCGACTCCCCCACCCTTTACTCTTTTTATTTATTTATTTATTTTTTCAAATTGGAATCTTGAAACAAATTAGAAGAACATTAAGTAGAATAAAAAAAACTGACATATTGATATTAACATTCATGGCAAACTAAAAAAATACAACTTATGTATAAAATAAACTCTACGAAATTGCAGATAAATATTCCCAAAATGAATCACAATCTTCTCTAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGTTGGAATGAAGAGTGTTCACACGAGATTTCGGGAGAAATTTAATTCGTGGAAATGAACTTTGTATATTGATTTGTGTAGTGGATACAATCTCTAATATTTACTCCTTTGATGCTTTCTCTCGAATGCAAATTAAAACTTTTAGGATTTCTTGGTCTTCGATCTTCAGACAATTGTGGCTGCAAGTTAATTTGAGCTTCAATCTTCTGGAATTCAAAGAAAGTTTGATCTTCCAAGTCTTCAATCTTTCAGAAGATGGTAACTCGGGTTGATGAGAACTTGTAGGTCTTGAGAACTTTTAGAAGTTTGAATCTTCAATTCTTTAGAGCTTCAATTCTTCCTTCCACCAAGATCCCCCTTTAATGAAAGGGAAGGTCTCTTATTTATAGAGAACTTTTATGGGCCTTAGATGGGCTTGGGTCCCTTTGCTTGTTGGGCTTGGGCTTGGGCTTGGACTTGGGCCCCTTTGCTTATTGGGTTTGGGCTTGGGTCCATTATTTTTTTTTTTGGGCCAAAATTTCTTGCTTAACAAATGCTCCCATTTCAAGATTCGTGCACATGTATACCGTGGATGAATCTTGAAAAAGATAGTTTAAGATCAAAGTATGATTTTGACTCATTTGCATTGAGACATCATTTTAACCAAAACATGAGAATATAGCTCAAAAACAATTTTGATTTGAAACTTTGTTTGTTTGGCACATATTGCATCAAGTAAACGAGAAATGAATTTTACTCATTGACTTTCTTACTTGGGAGGGGTAGCCATTTTTATTTGAATTTTGAGCAGCACCCTAAATTTTATTTTTATTTTTATTTTTTGTAATTTTTATTTATTATTATTATTATTATTAACAATTTATTTTAACAAGATTTGAGAAAAAGAATAAATAAATGGTTTCAAAAATTATTTTAACAATTTATTTTAACAAGATTTGAGAAAAAGAATAGATAAATGGTTTCAAAAATTATTTTAACAATTTATTTTAACAAGATTTGGTATGAGAAAATAAATAAATTAATAAATACAACTACCAAATCTCACCCGATTTGATTTGTCACAAATAAAGATTTCTTATACTCTACTATAAACAGAGGAGCTCAGCCATCTCTTTTTGTCAATCTCAGCCTGCGTAGAACAAGAACTCTTTTTCTGCAACCTCGAGGTAAACAATTTTTTTTTCTTAAGAGTTTTCTTCTTCTTTCTTTCTTCTTCTTTTTAAAAAAAGAATTTTTTTTGTGTAAAAAGTAAAGTAAAAAAAAAGAAAAGAAATTTCTTTCTTTATTTCTTTCTTTTTTTTTTTTTTTTCCTTTCTTTTCCTTATGCCGATTTCTTTCTCTTTCTTTTTCTTTTTTTTTCTTTTCTTTTCCTGCTGGTTTCTTTCTCTCTTTTTCCATTTTTTTTCTTCTCACCCCTAACCTACTACTTTTTTTTGTTTGTTTGTTTTTTTTTTCCAGGCTTAGCAACTAGTAATCTACACACTTATTACGAAGGAAAGAAATCTAGCAAGGTTTTTTTTTTTTTTTTTATATAGGGCGCATGCACGCACAAGCCTATACTTTTGGTTTGGTTCATGATAGACGATACAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTAGTTTGTTTTGGTCCATGATAGACGATGCAACTCTATCATGGCATTCATCACTTGTATTTTGGTTTGGTTCATGATAGACGATGCAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTCAATTTGGTTTGGTCCATGATAGACGATGCAGCTCTATCATGGCCTTCCTCACCTGCATTTTTCACCTGCATTTTTCACCTGCACTTTGGCTTGGTTCATGATAGACGATGCAACTCTATCATGACATTCCTCACCTGCACTTTGGTTTGGTTCATGATAGACGATGCAACTCTATCATGACATTTCTTGACGTCCTGCTGCTTCTTGGTTTGGTTTGGTCCATGATAGACGATGCAATTCTATCATGGCATTTCTCACCTGCATTTTGGTTTGGTTCATGATAGACGATGCAACTCTATCGCGACATTCCTTGGCGTCGTGCATCCTTTGACATTCCTTGTTCTACATTTTTTGTTTTTTTGCACACCATGTCGACGGTACTAATTCGTTTTTGGTAATCTTTCTTTTGCAAAAAGATGGTTTACTTCATTGAATGCTTCTTATCTGGAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAGATGGTCTCAGTCTCCTTGTAAAGAAGTCGTTGACGGGTCATTTTGCAAATTTTTGGCCAAACCTAGACAACAACTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTTAGGGAAAAAATGCATGGGTCCTTCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGCATAATTGAAGGCCAAACCCGTTGCGGTGTCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAGTGGGCGAATTCTCTACGATGCTCGTTTATTTGGTGTCGTAACAACTTATTTGTACACATATGATCGTAACAACGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATAATCTTCATACCATGGCAGGCGAGGTATCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTTCAATTAGGGGGAATTTCTACAGGAAGGCATCCCTTCCCTTAAAGAATTGGTCTCTTCACGCGATAAGGCAAAATGTCTCCCGACAACATGTCAATATCTGTTTCTGGCGTATCATTCAATAG

mRNA sequence

ATGTCAGGCCAGATGGATAAGGAAAGCGAATTTTTAATGTTGGTTGTCAACAACAGCGGTCTTCCACTGTTCACGATCTTCTCTCTCGTTTTCGGCTCCCACCTCACGTCTTCTTCTTCTTCCCTCACTTTTTCGGCTCTCACCTCTTCCTCTTCTTCTTCGTCAGGAGTATCTTTTCAAGATTGTTCCGATTGGCTACTCTGTGGTGGGGAAATCCAGCCTCCTTTCACAGTACTTCGGATGCCTGTCGTTGCTCTATTAAAGGACAAGAGTAATGAGCAATATAAGGGTGTTCAGTTGGCTTCTGAACAGAACATCTTTAGTCAACAGTTGGTTCTGGATTCGTGCTTCATGGATATAATATACTGCTACATTGTTTTGATATGCCTGCGTAGAACAAGAACTCTTTTTCTGCAACCTCGAGGCTTAGCAACTAGGCGCATGCACGCACAAGCCTATACTTTTGGTTTGGTTCATGATAGACGATACAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTAGTTTGTTTTGGTCCATGATAGACGATGCAACTCTATCATGGCATTCATCACTTACGATGCAACTCTATCGCGACATTCCTTGGCGTCGTGCATCCTTTGACATTCCTTGTTCTACATTTTTTGTTTTTTTGCACACCATGTCGACGGGAAAAAATGCATGGGTCCTTCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGCATAATTGAAGGCCAAACCCGTTGCGGTGTCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAGTGGGCGAATTCTCTACGATGCTCGTTTATTTGGTGTCGTAACAACTTATTTGTACACATATGATCGTAACAACGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATAATCTTCATACCATGGCAGGCGAGGTATCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTTCAATTAGGGGGAATTTCTACAGGAAGGCATCCCTTCCCTTAAAGAATTGGTCTCTTCACGCGATAAGGCAAAATGTCTCCCGACAACATGTCAATATCTGTTTCTGGCGTATCATTCAATAG

Coding sequence (CDS)

ATGTCAGGCCAGATGGATAAGGAAAGCGAATTTTTAATGTTGGTTGTCAACAACAGCGGTCTTCCACTGTTCACGATCTTCTCTCTCGTTTTCGGCTCCCACCTCACGTCTTCTTCTTCTTCCCTCACTTTTTCGGCTCTCACCTCTTCCTCTTCTTCTTCGTCAGGAGTATCTTTTCAAGATTGTTCCGATTGGCTACTCTGTGGTGGGGAAATCCAGCCTCCTTTCACAGTACTTCGGATGCCTGTCGTTGCTCTATTAAAGGACAAGAGTAATGAGCAATATAAGGGTGTTCAGTTGGCTTCTGAACAGAACATCTTTAGTCAACAGTTGGTTCTGGATTCGTGCTTCATGGATATAATATACTGCTACATTGTTTTGATATGCCTGCGTAGAACAAGAACTCTTTTTCTGCAACCTCGAGGCTTAGCAACTAGGCGCATGCACGCACAAGCCTATACTTTTGGTTTGGTTCATGATAGACGATACAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTAGTTTGTTTTGGTCCATGATAGACGATGCAACTCTATCATGGCATTCATCACTTACGATGCAACTCTATCGCGACATTCCTTGGCGTCGTGCATCCTTTGACATTCCTTGTTCTACATTTTTTGTTTTTTTGCACACCATGTCGACGGGAAAAAATGCATGGGTCCTTCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGCATAATTGAAGGCCAAACCCGTTGCGGTGTCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAGTGGGCGAATTCTCTACGATGCTCGTTTATTTGGTGTCGTAACAACTTATTTGTACACATATGATCGTAACAACGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATAATCTTCATACCATGGCAGGCGAGGTATCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTTCAATTAGGGGGAATTTCTACAGGAAGGCATCCCTTCCCTTAAAGAATTGGTCTCTTCACGCGATAAGGCAAAATGTCTCCCGACAACATGTCAATATCTGTTTCTGGCGTATCATTCAATAG

Protein sequence

MSGQMDKESEFLMLVVNNSGLPLFTIFSLVFGSHLTSSSSSLTFSALTSSSSSSSGVSFQDCSDWLLCGGEIQPPFTVLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSCFMDIIYCYIVLICLRRTRTLFLQPRGLATRRMHAQAYTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSLTMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRKASLPLKNWSLHAIRQNVSRQHVNICFWRIIQ
Homology
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BLAST of PI0000205 vs. ExPASy Swiss-Prot
Match: Q8LLD4 (Rab escort protein 1 OS=Arabidopsis thaliana OX=3702 GN=REP PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 4.7e-06
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0 

Query: 78  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC 117
           VLRMP+ ALL DK    YKGV+LAS Q IFSQ+L+LD C
Sbjct: 314 VLRMPITALLLDKETGGYKGVRLASGQEIFSQKLILDPC 352

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BLAST of PI0000205 vs. ExPASy TrEMBL
Match: A0A5A7V773 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001920 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 128/226 (56.64%), Postives = 152/226 (67.26%), Query Frame = 0 

Query: 137 FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHS 196
           FL   GL T +++  A       G VHDRR NSIM+    L+  ++ + M  +  LS   
Sbjct: 31  FLDAWGLFTMQLYHDALLICQLLGFVHDRRCNSIMSPAASLMPRTMVYFM--ERFLSGVR 90

Query: 197 SL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWVLQSSIHDEAPNANRVLTLGH 256
            L T Q + D PWR               +     K AW+LQSSIH+EAPN+ R LTLG 
Sbjct: 91  HLTTTQFFPDYPWR---------------YLCLREKGAWILQSSIHNEAPNSGRALTLGQ 150

Query: 257 RIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNN 316
           R+I+GQTR G VTKVPGEFCF DCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+
Sbjct: 151 RLIKGQTRWGTVTKVPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGTVTASLYTYDRNS 210

Query: 317 DVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK 358
           DVVRAFCEAWCPSTN LHTMAGE+SISLWDLWSFGGL ++G+FY K
Sbjct: 211 DVVRAFCEAWCPSTNTLHTMAGELSISLWDLWSFGGLLVKGDFYEK 239

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BLAST of PI0000205 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.8e-60
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 0 

Query: 223 MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEF 282
           +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE 
Sbjct: 63  LSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWLEL 122

Query: 283 VVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDL 342
           VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTMAGE+SISLWDL
Sbjct: 123 VVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL 182

Query: 343 WSFGGLSIRGNFYRK 358
           WSFGGL I+G+FY +
Sbjct: 183 WSFGGLPIKGDFYEE 197

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BLAST of PI0000205 vs. ExPASy TrEMBL
Match: A0A5A7T019 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00490 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-58
Identity = 104/132 (78.79%), Postives = 118/132 (89.39%), Query Frame = 0 

Query: 226 GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVG 285
           GK+AWVLQSSIH+EAPN++R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVG
Sbjct: 63  GKSAWVLQSSIHNEAPNSSRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWLELVVG 122

Query: 286 RSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSF 345
           R+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHT+AGE+SISLWDLWSF
Sbjct: 123 RNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNILHTVAGELSISLWDLWSF 182

Query: 346 GGLSIRGNFYRK 358
           GGL I+G+FY +
Sbjct: 183 GGLPIKGDFYEE 194

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BLAST of PI0000205 vs. ExPASy TrEMBL
Match: A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-58
Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 223 MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEF 282
           +S GK+AW+LQSSIH EAPN+ R LTLG R+IEGQTR G VTKVP EFCFTDCYWEWLE 
Sbjct: 63  LSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWLEL 122

Query: 283 VVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDL 342
           VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTMAGE+SISLWDL
Sbjct: 123 VVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL 182

Query: 343 WSFGGLSIRGNFYRK 358
           WSFGGL I+G+FY +
Sbjct: 183 WSFGGLPIKGDFYEE 197

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BLAST of PI0000205 vs. ExPASy TrEMBL
Match: A0A5D3D2X6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004010 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-58
Identity = 125/224 (55.80%), Postives = 141/224 (62.95%), Query Frame = 0 

Query: 156 GLVHDRRYNSIMT---FLDVLLLPSLFWSMIDDATLSWHSSLTMQLYRDIP--------- 215
           G V DRR NSIMT   FLD                 SW   L +   R+ P         
Sbjct: 15  GFVCDRRCNSIMTPYCFLD-----------------SWVRHLVILSDRNQPRDGLSLIVE 74

Query: 216 ----------WRRASFDIPCSTFFVFLHTMSTGKNAWVLQSSIHDEAPNANRVLTLGHRI 275
                     W R   +      FV +  +S GK+AWVLQSSIH+EAPN  R LTLG R+
Sbjct: 75  KPWAGAFVDHWPRLGNNSVLPRLFVEV-PLSEGKSAWVLQSSIHNEAPNPGRALTLGQRL 134

Query: 276 IEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDV 335
           IEGQTR G VTKVP EFCFTDCYWEWLE VVGR+ R+LY   L+GVVT  LYTYDRN+DV
Sbjct: 135 IEGQTRWGTVTKVPREFCFTDCYWEWLELVVGRNTRLLYSTHLYGVVTASLYTYDRNSDV 194

Query: 336 VRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK 358
           VRAFCEAWCP TN LHTMA E+SISLWDLWSFGGL I+G+FY +
Sbjct: 195 VRAFCEAWCPLTNTLHTMASELSISLWDLWSFGGLPIKGDFYEE 220

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BLAST of PI0000205 vs. NCBI nr
Match: KAA0063074.1 (uncharacterized protein E6C27_scaffold468G001920 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 3.4e-62
Identity = 128/226 (56.64%), Postives = 152/226 (67.26%), Query Frame = 0 

Query: 137 FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHS 196
           FL   GL T +++  A       G VHDRR NSIM+    L+  ++ + M  +  LS   
Sbjct: 31  FLDAWGLFTMQLYHDALLICQLLGFVHDRRCNSIMSPAASLMPRTMVYFM--ERFLSGVR 90

Query: 197 SL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWVLQSSIHDEAPNANRVLTLGH 256
            L T Q + D PWR               +     K AW+LQSSIH+EAPN+ R LTLG 
Sbjct: 91  HLTTTQFFPDYPWR---------------YLCLREKGAWILQSSIHNEAPNSGRALTLGQ 150

Query: 257 RIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNN 316
           R+I+GQTR G VTKVPGEFCF DCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+
Sbjct: 151 RLIKGQTRWGTVTKVPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGTVTASLYTYDRNS 210

Query: 317 DVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK 358
           DVVRAFCEAWCPSTN LHTMAGE+SISLWDLWSFGGL ++G+FY K
Sbjct: 211 DVVRAFCEAWCPSTNTLHTMAGELSISLWDLWSFGGLLVKGDFYEK 239

[Close]
BLAST of PI0000205 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-59
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 0 

Query: 223 MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEF 282
           +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE 
Sbjct: 63  LSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWLEL 122

Query: 283 VVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDL 342
           VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTMAGE+SISLWDL
Sbjct: 123 VVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL 182

Query: 343 WSFGGLSIRGNFYRK 358
           WSFGGL I+G+FY +
Sbjct: 183 WSFGGLPIKGDFYEE 197

[Close]
BLAST of PI0000205 vs. NCBI nr
Match: KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-58
Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 223 MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEF 282
           +S GK+AW+LQSSIH EAPN+ R LTLG R+IEGQTR G VTKVP EFCFTDCYWEWLE 
Sbjct: 63  LSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWLEL 122

Query: 283 VVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDL 342
           VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTMAGE+SISLWDL
Sbjct: 123 VVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL 182

Query: 343 WSFGGLSIRGNFYRK 358
           WSFGGL I+G+FY +
Sbjct: 183 WSFGGLPIKGDFYEE 197

[Close]
BLAST of PI0000205 vs. NCBI nr
Match: KAA0034815.1 (hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-58
Identity = 104/132 (78.79%), Postives = 118/132 (89.39%), Query Frame = 0 

Query: 226 GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVG 285
           GK+AWVLQSSIH+EAPN++R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVG
Sbjct: 63  GKSAWVLQSSIHNEAPNSSRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWLELVVG 122

Query: 286 RSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSF 345
           R+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHT+AGE+SISLWDLWSF
Sbjct: 123 RNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNILHTVAGELSISLWDLWSF 182

Query: 346 GGLSIRGNFYRK 358
           GGL I+G+FY +
Sbjct: 183 GGLPIKGDFYEE 194

[Close]
BLAST of PI0000205 vs. NCBI nr
Match: TYK19639.1 (hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 6.6e-58
Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 223 MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEF 282
           +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE 
Sbjct: 63  LSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWLEL 122

Query: 283 VVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDL 342
           VVGR+ R+LY   L+ VVT  LYTYDRN+DVVRAFCEAWCPSTN LHTMAGE+SISLWDL
Sbjct: 123 VVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL 182

Query: 343 WSFGGLSIRGNFYRK 358
           WSF GL I+G+FY +
Sbjct: 183 WSFRGLPIKGDFYEE 197

[Close]
BLAST of PI0000205 vs. TAIR 10
Match: AT3G06540.1 (Rab escort protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-07
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0 

Query: 78  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC 117
           VLRMP+ ALL DK    YKGV+LAS Q IFSQ+L+LD C
Sbjct: 314 VLRMPITALLLDKETGGYKGVRLASGQEIFSQKLILDPC 352

[Close]
BLAST of PI0000205 vs. TAIR 10
Match: AT1G32120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 8.2e-06
Identity = 24/97 (24.74%), Postives = 45/97 (46.39%), Query Frame = 0 

Query: 278 EWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSI 337
           EW+  +      +   + ++  +    Y   R++D++ A  E WC  TN      GE ++
Sbjct: 86  EWVNVMAKSHATVWKKSGVYDAILASRYQIKRHDDLIVALVEKWCIETNTFVFPWGEATL 145

Query: 338 SLWDLWSFGGLSIRGNFYRKASLPLKNWSLHAIRQNV 375
           +L D+   GGLS+ GN    A  P+K   +  + + +
Sbjct: 146 TLEDMIVLGGLSVTGN---NALAPVKRDGMKEVEEKM 179

The following BLAST results are available for this feature:
BLAST of PI0000205 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LLD44.7e-0666.67Rab escort protein 1 OS=Arabidopsis thaliana OX=3702 GN=REP PE=1 SV=2[more]
BLAST of PI0000205 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V7731.6e-6256.64PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TX425.8e-6078.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T0191.1e-5878.79PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7VHW81.1e-5877.04PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3D2X63.2e-5855.80PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
BLAST of PI0000205 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063074.13.4e-6256.64uncharacterized protein E6C27_scaffold468G001920 [Cucumis melo var. makuwa][more]
KAA0047478.11.2e-5978.52hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa][more]
KAA0065375.12.3e-5877.04hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa][more]
KAA0034815.12.3e-5878.79hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa][more]
TYK19639.16.6e-5877.04hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa][more]
BLAST of PI0000205 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06540.13.3e-0766.67Rab escort protein [more]
AT1G32120.18.2e-0624.74FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36607:SF201,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4coord: 194..355
NoneNo IPR availablePANTHERPTHR366071,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4coord: 194..355

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000205.1PI0000205.1mRNA