PI0009091 (gene) Melon (PI 482460) v1

Overview
NamePI0009091
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr06: 19900446 .. 19901680 (+)
RNA-Seq ExpressionPI0009091
SyntenyPI0009091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCGTCGCATTCATAAGGAAGGACCCCTACTCCAATACTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGACGACATGGTGGTTAAGGTGACCATCGCGGGGAAGCATCTGCTCCCACACGAGGTACCAAAACAATAGACCCCAACACTCCCATCATCAACAGCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA

mRNA sequence

ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA

Coding sequence (CDS)

ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA

Protein sequence

MRHPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLLKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTETQPTTTASSTSPMESLLREYMQKNDPLLQSQASSIRNLEVQLGQLASDFSGRQQGSLPINT
Homology
BLAST of PI0009091 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 124/285 (43.51%), Postives = 168/285 (58.95%), Query Frame = 0

Query: 4   PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
           P     NPGI  P   +  +FE+K VM QM+Q  GQF   P EDPH H+RSF  +  SF 
Sbjct: 29  PMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSGMPTEDPHLHLRSFLEVSDSFK 88

Query: 64  MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
           + G+S E LR  LFP +LRD A+ W N L    V  W+ L EKF++K+FPP  NA+ R E
Sbjct: 89  IQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 148

Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
           +MSFQQ + E+  DAW RFK +++ CPH+GIP CI ME FY GLN A++   DA     +
Sbjct: 149 IMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETFYNGLNAASRMVLDASANGAI 208

Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDG-MDKSAVVALQGQMTAMNNL 243
           L  +YN+    L+T+ASNN +W      N R   ++   G ++  A+ AL  QM +M N+
Sbjct: 209 LSKSYNEAFEILETIASNNYQW-----SNTRAPTSRKVAGVLEVDAITALTAQMASMTNV 268

Query: 244 LKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTET 288
           LK+++I   N +     AA Q DD+ CV CG     + CP N E+
Sbjct: 269 LKNLSIG--NAKNIQPAAAIQSDDVSCVFCGEGHVFEKCPSNPES 305

BLAST of PI0009091 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.3e-54
Identity = 138/421 (32.78%), Postives = 201/421 (47.74%), Query Frame = 0

Query: 3   HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASF 62
           HP     NP I  P   +   FE+K VM QM+Q  GQF     +DPH H++SF  +  SF
Sbjct: 27  HPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLSSKDPHLHLKSFLGVSDSF 86

Query: 63  HMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRK 122
              G+  + +R + F  +LRD AK W N L  G + +W+ L EKF+ K+FPP  +AR R 
Sbjct: 87  RFQGVDKDVIRLSFFSYSLRDGAKSWLNILALGIIDSWNSLAEKFLFKYFPPTRSARFRN 146

Query: 123 ELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDG 182
           E+++FQ+ + E L +AW RFK  ++ CPH+G+P CI +E FY GLN AT+Q  DA     
Sbjct: 147 EIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQIETFYNGLNTATKQVVDASANGD 206

Query: 183 MLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNL 242
           +L  TYN+    L+ +ASNN +W +     R     K  + ++  A+ ++  Q+ +M N+
Sbjct: 207 ILSKTYNEAYEILERIASNNCQWVD----VRSNPGKKTREVLEVDALSSINAQLASMTNI 266

Query: 243 LKSMTISQVNVEGSSVHAAN---QIDDMRCVGCGGHPNTDACPLNTET------------ 302
           L+++   Q ++  +  H A    Q     CV CG     D CP N  +            
Sbjct: 267 LQNLAFGQGSMIKAPAHTATVMIQTATESCVYCGEKHTFDQCPSNPASIFYVGNQASQGN 326

Query: 303 -----------------------------------------------------QPTTTAS 348
                                                                Q TT   
Sbjct: 327 PKTNPSSNTYNPGWRNHPNFLCKGQGSYNQQMPPKANYPPGFGLQNQLTYDSQQATTQGE 386

BLAST of PI0009091 vs. ExPASy TrEMBL
Match: A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 122/241 (50.62%), Postives = 159/241 (65.98%), Query Frame = 0

Query: 125 MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGML 184
           M+F+Q+DRENL D W RFKRM+K CPH+ IP+C+LME FYFGL+K T Q+A+ V   GML
Sbjct: 1   MTFEQRDRENLIDVWKRFKRMIKRCPHHCIPECVLMEQFYFGLSKNTLQSANIVFTGGML 60

Query: 185 KSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRAKGDDGMDKSAVVALQGQMTA 244
           +S+YNQIK  LDTMASN++EW ++ FG+R      +G R + +DG+D S +VALQGQ+  
Sbjct: 61  RSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGTKGNRGRIEDGIDMSIMVALQGQVIE 120

Query: 245 MNNLLKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTETQPTTTASSTSP 304
           M N+L+SM + QVNV  SSV    Q+++M CVGC    NT+ACPLNTE            
Sbjct: 121 M-NILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRAPHNTNACPLNTE------------ 180

Query: 305 MESLLREYMQKNDPL------------LQSQASSIRNLEVQLGQLASDFSGRQQGSLPIN 348
               +  Y+ KNDP             + SQASSI+N+E+QLGQL SDFS R + S P N
Sbjct: 181 ----IVAYL-KNDPTPIHIMWGGETTQISSQASSIKNMELQLGQLTSDFSRRPKRSFPSN 223

BLAST of PI0009091 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 134/401 (33.42%), Postives = 197/401 (49.13%), Query Frame = 0

Query: 3   HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASF 62
           HP     NP I  P   +   FE+K VM QM+Q  GQF   P EDPH H++SF  +  SF
Sbjct: 57  HPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPSEDPHLHLKSFLGVSDSF 116

Query: 63  HMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRK 122
               +  + +R +LFP +LRD AK W N L  G + +W+ L+EKF+ K+FPP  NAR R 
Sbjct: 117 RFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVEKFLIKYFPPTRNARFRN 176

Query: 123 ELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDG 182
           E++ FQQ + + L +AW RFK M++ CPH+G+P CI ME FY GLN AT+Q  DA     
Sbjct: 177 EIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGA 236

Query: 183 MLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNL 242
           +L  TYN+    L+ +ASNN +W   D  +  G + +G   ++  A+ ++  Q+ ++ N+
Sbjct: 237 ILSKTYNEAYEILERIASNNCQW--ADVRSNPGRKTRG--VLEVDALSSINAQLASVTNI 296

Query: 243 LKSMTISQVNVEGSSVHAA---NQIDDMRCVGCGGHPNTDACP----------------- 302
           L+++ + Q ++  + VH     NQ     CV CG     D CP                 
Sbjct: 297 LQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGN 356

Query: 303 ------------------------------------------------------LNTETQ 328
                                                                 +NT+ +
Sbjct: 357 PKNNPFSNTYNPGWRNHPNFSWKGQGSYNQQMPPKANYPPGFGLQNQLAYSSQQVNTQGK 416

BLAST of PI0009091 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 138/410 (33.66%), Postives = 199/410 (48.54%), Query Frame = 0

Query: 3   HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSI---- 62
           HP     NP I  P   +   FE+K VM QM+Q  GQF   P EDPH H++SF  +    
Sbjct: 79  HPAVEELNPCIIRPEI-QGTTFELKPVMFQMLQTIGQFHGLPLEDPHLHLKSFLGVSDSF 138

Query: 63  ---CASFHMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPY 122
                SF   G+  + +R +LFP  LRD AK W N L  G + +W+ L E F+ K+FPP 
Sbjct: 139 RFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLAPGTIDSWNSLAENFLIKYFPPT 198

Query: 123 ENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTA 182
            NAR + E+++FQQ + E L +A  RFK M++ CPH+G+P CI ME FY GLN  T+Q  
Sbjct: 199 RNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVV 258

Query: 183 DAVLVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQ 242
           DA     +L  TYN+    L+ +ASNN +W   D  +  G + +G   ++  A+ ++  Q
Sbjct: 259 DASANGAILSKTYNEAYEILERIASNNCQW--ADVRSNPGRKTRG--VLEVDALSSINAQ 318

Query: 243 MTAMNNLLKSMTISQVNVEGSSVHAA---NQIDDMRCVGCGGHPNTDACP---------- 302
           + ++ N+L+++ + Q ++  + VH A   NQ     CV CG     D CP          
Sbjct: 319 LASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVG 378

Query: 303 ------------------------------------------------------------ 330
                                                                       
Sbjct: 379 NQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPKANYPSGFRLQNQLAYSSQ 438

BLAST of PI0009091 vs. NCBI nr
Match: XP_038889363.1 (uncharacterized protein LOC120079279 [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 9.7e-69
Identity = 150/370 (40.54%), Postives = 222/370 (60.00%), Query Frame = 0

Query: 20  ENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISLEELRFALFPL 79
           EN RF+IK VMLQM+QN GQFG    ED H H+ SF  +C++F + G++ E +R  LFP 
Sbjct: 4   ENTRFKIKSVMLQMVQNTGQFGGLQGEDLHAHLTSFVEMCSTFSISGVTPEGIRLYLFPY 63

Query: 80  TLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQKDRENLHDAW 139
           TLRDEA  WA++LE  E+ +WDQL+E FMKKFFPP  NARRRK++++F+Q + E L   W
Sbjct: 64  TLRDEANIWAHSLEPNEITSWDQLVEWFMKKFFPPTVNARRRKDVLNFEQMNNETLSTTW 123

Query: 140 SRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYNQIKTTLDTMA 199
              +R+VK C H GIP C+LM+ FY GLN++TQ  ADA +  G +  TY + K  L  ++
Sbjct: 124 VHLRRLVKNCLHIGIPDCVLMKTFYNGLNRSTQVVADASVARGFMDKTYTEAKVILHRIS 183

Query: 200 SNNEEWDEDDFGNRRGGRAKGDDG-MDKSAVVALQGQMTAMNNLLKSMTISQ--VNVEGS 259
            N ++  +D +G R   R + D+  +    +  L  QM A+ +LL++M ++Q  ++   +
Sbjct: 184 RNTDDCVDDGYGGRGSERRRNDNAIVPLDTMTTLAAQMAAVTSLLQTMALNQGALSQISA 243

Query: 260 SVHAANQIDDMRCVGCGG----HPN-------TDACPLNTET------------------ 319
             +A  Q+  + CV CGG    HPN           P N ++                  
Sbjct: 244 QPNAPAQVAAISCVQCGGGHANHPNFGWGGNHNQGGPSNHQSNNFENRGNSPPFHQNQNQ 303

Query: 320 ----QP------TTTASSTSPMESLLREYMQKNDPLLQSQASSIRNLEVQLGQLASDFSG 348
               QP      + T++++S +ESLL++Y++KND ++QSQ SSIRNLE+Q+GQLA++   
Sbjct: 304 GHQPQPQNLPSSSNTSANSSSLESLLKQYIEKNDVVMQSQVSSIRNLEIQVGQLATELRN 363

BLAST of PI0009091 vs. NCBI nr
Match: XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-67
Identity = 159/398 (39.95%), Postives = 207/398 (52.01%), Query Frame = 0

Query: 4   PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
           P     NPGI  P   +   FE+K VM QM+Q  GQFG  P EDPH HIRSF  +  SF 
Sbjct: 33  PMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIRSFLEVSDSFK 92

Query: 64  MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
           + G+S E LR  LFP +LRD A+ W N L    V  W+ L EKF++K+FPP  NA+ R E
Sbjct: 93  LQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 152

Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
           +MSFQQ + E   DAW RFK +++ CPH+GIP CI +E FY GLN A++   DA     +
Sbjct: 153 IMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAI 212

Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
           L  +YN+    L+ +ASNN +W      NR     K    ++  A+ AL  QM +M N+L
Sbjct: 213 LSKSYNEAFEILERIASNNYQWST----NRAHTSRKVAGVLEVDALTALTAQMASMTNIL 272

Query: 244 KSMTISQVNVEGSSVHAANQIDDMR--CVGCGGHPNTDACPLNTET-------------- 303
           K+M +      G SV  A  I   +  CV CG     + CP N  +              
Sbjct: 273 KNMNM------GGSVQPAAAIQRAKNSCVYCGDGHTFENCPSNLASVCYVGNQNFNRNNN 332

Query: 304 -------------------------------------QP-TTTASSTSPMESLLREYMQK 348
                                                QP     S TS +ESL+R+YM K
Sbjct: 333 PYSNSYNPAWKHHPNFSWGGQGKQSFPPGFSQQPRPQQPHQPQGSQTSSLESLMRDYMAK 392

BLAST of PI0009091 vs. NCBI nr
Match: XP_030510138.1 (uncharacterized protein LOC115724905 [Cannabis sativa])

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-65
Identity = 157/397 (39.55%), Postives = 206/397 (51.89%), Query Frame = 0

Query: 10  NPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISL 69
           NPGI  P   +   FE+K VM QM+Q  GQFG  P EDPH HI SF  +  SF + G+S 
Sbjct: 6   NPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIHSFLEVSDSFKLQGVSE 65

Query: 70  EELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQ 129
           E LR  LFP +LRD A+ W N L    V  W+ L E F++K+FPP  NA+ R E+MSFQQ
Sbjct: 66  EALRLKLFPFSLRDRARAWLNTLPSDSVTNWNDLAENFLRKYFPPTRNAKFRSEIMSFQQ 125

Query: 130 KDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYN 189
            + E   DAW RFK +++ CPH+GIP CI +E FY GLN A++   DA     +L  +YN
Sbjct: 126 LEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAILSKSYN 185

Query: 190 QIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLLKSMTIS 249
           +    L+ +ASNN +W      NR     K    ++  A+ AL  QM +M N+LK+M + 
Sbjct: 186 EAFEILERIASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNILKNMNM- 245

Query: 250 QVNVEGSSVH--AANQIDDMRCVGCGGHPNTDACPLNTET-------------------- 309
                G SV   AA Q  ++ CV CG     + CP N  +                    
Sbjct: 246 -----GGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSY 305

Query: 310 ------------------------------------QP-TTTASSTSPMESLLREYMQKN 348
                                               QP     S TS +ESL+R+YM KN
Sbjct: 306 NPAWKHHPNFSWGGQGASSSGAQGQGKQSFPPGFSQQPHQPQGSQTSSLESLMRDYMAKN 365

BLAST of PI0009091 vs. NCBI nr
Match: XP_030505184.1 (uncharacterized protein LOC115720166 [Cannabis sativa])

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-64
Identity = 153/402 (38.06%), Postives = 206/402 (51.24%), Query Frame = 0

Query: 4   PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
           P     NPGI  P   +  +FE+K VM QM+Q  GQF E P EDPH H+RSF  +  SF 
Sbjct: 34  PMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSEMPTEDPHLHLRSFLEMSDSFK 93

Query: 64  MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
           + G+S E  R  LFP +LRD A+ W N L    V  W+   EKF++K+FPP  NA+ R E
Sbjct: 94  IQGVSEEVRRLKLFPFSLRDRARSWLNTLSPDSVTNWNDFAEKFLRKYFPPTRNAKFRSE 153

Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
           +MSF Q + E+  DAW RFK +++ CPH+GIP CI ME FY GLN  +Q   DA     +
Sbjct: 154 IMSFHQLEDESASDAWERFKELLRKCPHHGIPHCIQMETFYNGLNATSQMVLDASANGAI 213

Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
           L  +YN+    L+T+ASNN +W       R  G  K    ++  A+ AL  QM +M N+L
Sbjct: 214 LSKSYNEAFEILETIASNNYQWS----NTRAPGSRKVAGVLEVDAITALTTQMASMTNVL 273

Query: 244 KSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTET---------------- 303
           K+++I   N +     AA Q DD+ CV C      + CP N E+                
Sbjct: 274 KNLSIG--NSKNIQPAAAIQSDDVSCVFCREGHAFEKCPSNPESVCYMGNQNFNRNNGAF 333

Query: 304 ----------QPTTT--------------------------------ASSTSPMESLLRE 348
                      P  +                                 S  S +ESL+R+
Sbjct: 334 SNSYNQAWKNHPNLSWGSRSKLKHFDQGRQAYPPGFSQQLRHPQHAQNSQPSSLESLMRD 393

BLAST of PI0009091 vs. NCBI nr
Match: XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa])

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-61
Identity = 153/396 (38.64%), Postives = 200/396 (50.51%), Query Frame = 0

Query: 4   PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
           P     NPGI  P   +   FE+K VM QM+Q  GQFG  P EDPH HIRSF  +  SF 
Sbjct: 68  PMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIRSFLEVSDSFK 127

Query: 64  MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
           + G+S E LR  LFP +LRD A+ W N L    V  W+ L EKF++K+FPP  NA+ R E
Sbjct: 128 LQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 187

Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
           +MSFQQ + E   DAW RFK +++ CPH+GIP CI +E FY GLN A +   DA     +
Sbjct: 188 IMSFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAAARMVLDAFANGAI 247

Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
           L  +YN+    L+ +ASNN +W      NR     K    ++  A+ AL  QM +M N+L
Sbjct: 248 LSKSYNEAFEILERIASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNIL 307

Query: 244 KSMTISQVNVEGSSVH--AANQIDDMRCVGCG-GHP-------------------NTDAC 303
           K+M +      G SV   AA Q  ++ CV CG GH                    N +  
Sbjct: 308 KNMNM------GGSVQPAAAIQRAEISCVYCGDGHTFENFPSNPASVCYVGNQNFNRNNN 367

Query: 304 PLNTETQPT-------------------------------------------TTASSTSP 335
           P +    P                                               S TS 
Sbjct: 368 PYSNSYNPAWKHHPNFSWGGQGASSSGAQQAQGKQSFLPGFSQQPRPQQPHQPQGSQTSS 427

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
U5CUI21.1e-5743.51Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... [more]
A0A6J1G7Q64.3e-5432.78uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515... [more]
A0A5D3CC268.0e-5350.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1EEI28.0e-5333.42uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
A0A6J1EQ908.0e-5333.66uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
Match NameE-valueIdentityDescription
XP_038889363.19.7e-6940.54uncharacterized protein LOC120079279 [Benincasa hispida][more]
XP_030497803.13.1e-6739.95uncharacterized protein LOC115713460 [Cannabis sativa][more]
XP_030510138.11.7e-6539.55uncharacterized protein LOC115724905 [Cannabis sativa][more]
XP_030505184.11.9e-6438.06uncharacterized protein LOC115720166 [Cannabis sativa][more]
XP_030508936.13.3e-6138.64uncharacterized protein LOC115723589 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 76..168
e-value: 2.5E-17
score: 62.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..223
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 51..214
NoneNo IPR availablePANTHERPTHR24559:SF334SUBFAMILY NOT NAMEDcoord: 51..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009091.1PI0009091.1mRNA