MS023688 (gene) Bitter gourd (TR) v1

Overview


Name	MS023688
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosomal protein L18ae family
Location	scaffold570: 247936 .. 249246 (-)
RNA-Seq Expression	MS023688
Synteny	MS023688

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATGTTACAGATGCAAGAACCGAGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGGTAAATCAGGAAACAGAAAACTTGCTGACTGGGATTTTTTTTATGATTATGCTGATATAACGTATACTACCTTATATTGGTAGCTCGATAATGAAATTACTTGAACCATTTTCAACCTGCCCGTATAACATAATGGACACACATTTGCTTCATCACTGACCGTTCTTCATTGATGATGGAATCTCTGAAACACACAGGGCTTTTCATGTTTCCAGTTCCATTATGAGGGCAGGTTGAGTCGAAACTTAATAGCATCATTAGTACTTGTTTCCAACAGTTGTTTGATGGTCTACGGTCAAGATGCGAGTGTTTATCAGTCTAGCAGTTCATTTTATTTGATCTCAACTATTAATTGCAAAAGCTCCAATATTTCTGAAACTTCATGGCATCATTCAAGTTCTTTGTCAACACTTCTTTGACTGGTCTAAGGTCAATAGAAGTATTTCTCAGTTTTGTATTAATTATTTTCTTCGTGCTCATCTATTAATTCAGAAGACTGACTCCTGAGATTTTCATTTTGTTCTCTGTTGGAGATGTTGGTTAGGAGAGTTTTTTGGTTTGGTAGTCATTTGCTCAAAATGGTTGATTATGAAACCCATATTTACATTATGTTGTTATACACACCTAGGCCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCGTGAGTACCGTCGCAGTTTCTCGTGTACAATACATTTTGGGGACACCCTGTCTTGAGTTCCCTTATCTAACCTTTGTATCTGACTTTCTCTTTAGTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGACTAGCTGCATCTGCTATTGCTGTAAGTGACTTTAATCTCTCTTCCCCACATAAACAAATAACAATGGAAAGGGGGGGAAAACAAGCATAATTTACATCAATTGCCCGAATTACCTTTCATTTTTATGCATTTTGCCCCCTTTCTGTCGAGTGTTCTCATTGAATCTGCTCGAGTTTCTGAGGAAGCAAGAAATTGTAAATGGCGCAGGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTG

mRNA sequence

CTTGATGTTACAGATGCAAGAACCGAGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGGCCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGACTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTG

Coding sequence (CDS)

CTTGATGTTACAGATGCAAGAACCGAGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGGCCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGACTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTG

Protein sequence

LDVTDARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSVILLVVVAVLL

Homology

[Close]

BLAST of MS023688 vs. NCBI nr
Match: XP_022154701.1 (uncharacterized protein LOC111021894 isoform X3 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 2   DVTDARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 61
           D  DART ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ
Sbjct: 22  DQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 81

Query: 62  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA 121
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA
Sbjct: 82  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA 141

Query: 122 CSVILLVVVAVLL 135
           CSVILLVVVAVLL
Sbjct: 142 CSVILLVVVAVLL 154

[Close]

BLAST of MS023688 vs. NCBI nr
Match: XP_038889607.1 (uncharacterized protein LOC120079478 [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 116/130 (89.23%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDASDH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQVGL 63

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALACSI 123

Query: 125 ILLVVVAVLL 135
           ILLVVVAVLL
Sbjct: 124 ILLVVVAVLL 133

[Close]

BLAST of MS023688 vs. NCBI nr
Match: XP_022154699.1 (uncharacterized protein LOC111021894 isoform X1 [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 4.6e-59
Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 2   DVTDARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 61
           D  DART ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ
Sbjct: 22  DQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 81

Query: 62  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA 119
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
Sbjct: 82  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA 138

[Close]

BLAST of MS023688 vs. NCBI nr
Match: XP_008459564.1 (PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >KAA0061479.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa] >TYK10795.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 6.0e-59
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALACSI 123

Query: 125 ILLVVVAVLL 135
           ILL+VVAVLL
Sbjct: 124 ILLIVVAVLL 133

[Close]

BLAST of MS023688 vs. NCBI nr
Match: XP_004141063.1 (uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hypothetical protein Csa_019181 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58
Identity = 112/130 (86.15%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVED+QVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGL 63

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSI 123

Query: 125 ILLVVVAVLL 135
           +LL+VVAVLL
Sbjct: 124 LLLIVVAVLL 133

[Close]

BLAST of MS023688 vs. ExPASy TrEMBL
Match: A0A6J1DPH7 (uncharacterized protein LOC111021894 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021894 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.7e-65
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 2   DVTDARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 61
           D  DART ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ
Sbjct: 22  DQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 81

Query: 62  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA 121
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA
Sbjct: 82  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALA 141

Query: 122 CSVILLVVVAVLL 135
           CSVILLVVVAVLL
Sbjct: 142 CSVILLVVVAVLL 154

[Close]

BLAST of MS023688 vs. ExPASy TrEMBL
Match: A0A6J1DMX6 (uncharacterized protein LOC111021894 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021894 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 2   DVTDARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 61
           D  DART ETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ
Sbjct: 22  DQKDARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQ 81

Query: 62  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA 119
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA
Sbjct: 82  VGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIA 138

[Close]

BLAST of MS023688 vs. ExPASy TrEMBL
Match: A0A1S3CAZ9 (uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALACSI 123

Query: 125 ILLVVVAVLL 135
           ILL+VVAVLL
Sbjct: 124 ILLIVVAVLL 133

[Close]

BLAST of MS023688 vs. ExPASy TrEMBL
Match: A0A5D3CGZ6 (60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001100 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALACSI 123

Query: 125 ILLVVVAVLL 135
           ILL+VVAVLL
Sbjct: 124 ILLIVVAVLL 133

[Close]

BLAST of MS023688 vs. ExPASy TrEMBL
Match: A0A0A0LKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 112/130 (86.15%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 5   DARTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 64
           + + ++T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVED+QVGL
Sbjct: 65  NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGL 124

Query: 65  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAALACSV 124
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIAALACS+
Sbjct: 125 YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSI 184

Query: 125 ILLVVVAVLL 135
           +LL+VVAVLL
Sbjct: 185 LLLIVVAVLL 194

[Close]

BLAST of MS023688 vs. TAIR 10
Match: AT4G26060.1 (Ribosomal protein L18ae family )

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 75/125 (60.00%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 7   RTEETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYD 66
           R + + +LVKSV+DKH  L+RP A++ S      KDA    + +YTL++DV++ + G+YD
Sbjct: 8   RGDGSAELVKSVADKHAGLVRPVAKYYSAV----KDAMVCGKGRYTLVKDVDEVENGVYD 67

Query: 67  KPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVI 126
           KPLPCFGCGIGWFSFLLGF FP +WYYAT+LYF N  R+DPRERAGLAASAI A+  S++
Sbjct: 68  KPLPCFGCGIGWFSFLLGFVFPFLWYYATLLYFGNYYRKDPRERAGLAASAITAMGFSLL 127

Query: 127 LLVVV 131
           LLV+V
Sbjct: 128 LLVIV 128

[Close]

BLAST of MS023688 vs. TAIR 10
Match: AT5G57060.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-negative bacterium, cytolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Channel forming colicin, C-terminal cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-33
Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 13  QLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCF 72
           +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCF
Sbjct: 15  ELVKFIADRHAKLMKQASRHYSAI----KDAMARGKKRYTLVKDVDDMETGAYDKPLPCF 74

Query: 73  GCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA 132
           GCGIGWFSFLLGF FP +WYYA  LYF N  R+DPRERAGLAASAI A+  S++LLV+ A
Sbjct: 75  GCGIGWFSFLLGFMFPFLWYYAAFLYFGNYYRKDPRERAGLAASAITAMGFSLVLLVIFA 130

[Close]

BLAST of MS023688 vs. TAIR 10
Match: AT5G57060.2 (BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 41  KDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFW 100
           KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  LYF 
Sbjct: 12  KDAMARGKKRYTLVKDVDDMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFG 71

Query: 101 N-VRRDPRERAGLAASAIAALACSVILLVVVA 132
           N  R+DPRERAGLAASAI A+  S++LLV+ A
Sbjct: 72  NYYRKDPRERAGLAASAITAMGFSLVLLVIFA 103

[Close]

BLAST of MS023688 vs. TAIR 10
Match: AT1G54217.2 (Ribosomal protein L18ae family )

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 42  DASDHVRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFW 101
           D  +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  
Sbjct: 5   DLEEQKKGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLI 64

Query: 102 N-VRRDPRERAGLAASAIAALACSVILLVVVAVLL 135
           +   RDPRER+GLAASAIAAL  SV L++ V VL+
Sbjct: 65  SYYHRDPRERSGLAASAIAALIFSVALVITVLVLV 99

[Close]

BLAST of MS023688 vs. TAIR 10
Match: AT1G54217.1 (Ribosomal protein L18ae family )

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 48  RSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRD 107
           + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RD
Sbjct: 10  KGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLISYYHRD 69

Query: 108 PRERAGLAASAIAALACSVILLVVVAVLL 135
           PRER+GLAASAIAAL  SV L++ V VL+
Sbjct: 70  PRERSGLAASAIAALIFSVALVITVLVLV 98

The following BLAST results are available for this feature:

BLAST of MS023688 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154701.1	5.6e-65	97.74	uncharacterized protein LOC111021894 isoform X3 [Momordica charantia]	[more]
XP_038889607.1	1.2e-59	89.23	uncharacterized protein LOC120079478 [Benincasa hispida]	[more]
XP_022154699.1	4.6e-59	97.44	uncharacterized protein LOC111021894 isoform X1 [Momordica charantia]	[more]
XP_008459564.1	6.0e-59	87.69	PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 P...	[more]
XP_004141063.1	2.3e-58	86.15	uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hy...	[more]

BLAST of MS023688 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS023688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPH7	2.7e-65	97.74	uncharacterized protein LOC111021894 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DMX6	2.2e-59	97.44	uncharacterized protein LOC111021894 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CAZ9	2.9e-59	87.69	uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=...	[more]
A0A5D3CGZ6	2.9e-59	87.69	60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LKM2	1.1e-58	86.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1	[more]

BLAST of MS023688 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26060.1	1.3e-35	60.00	Ribosomal protein L18ae family	[more]
AT5G57060.1	2.1e-33	57.50	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-...	[more]
AT5G57060.2	1.1e-29	66.30	BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR...	[more]
AT1G54217.2	3.3e-23	61.05	Ribosomal protein L18ae family	[more]
AT1G54217.1	1.3e-22	64.04	Ribosomal protein L18ae family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46666:SF6	BNAC08G12080D PROTEIN	coord: 6..131
None	No IPR available	PANTHER	PTHR46666	60S RIBOSOMAL L18A-LIKE PROTEIN	coord: 6..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023688.1	MS023688.1	mRNA