MS022295 (gene) Bitter gourd (TR) v1

Overview
NameMS022295
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold47: 2329470 .. 2329700 (-)
RNA-Seq ExpressionMS022295
SyntenyMS022295
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACTTGTCTCTGTTGTTGTACGAAAGTCAAAGACCCAATCTCGGTGGAAGTCCAAGTAACTGAAAGCGGCAAAAGCTGCTTTTGCAAGCCCATGAAGCTCTGTCTTTCTCTCTCCCCCACGGAAAGACATTCCTAAAGTAAAACTACCTCCCCATGTGACTTGTTTCTAAATCTCAAGGATTACCCTTTTCACAGCAAGCGTGCAAATAGATCTATGTTCAAATATGCT

mRNA sequence

AAAACTTGTCTCTGTTGTTGTACGAAAGTCAAAGACCCAATCTCGGTGGAAGTCCAAGTAACTGAAAGCGGCAAAAGCTGCTTTTGCAAGCCCATGAAGTCTGTCTTTCTCTCTCCCCCACGGAAAGACATTCCTAAAGTAAAACTACCTCCCCATGTGACTTGTTTCAATCTCAAGGATTACCCTTTTCACAGCAAGCGTGCAAATAGATCTATGTTCAAATATGCT

Coding sequence (CDS)

AAAACTTGTCTCTGTTGTTGTACGAAAGTCAAAGACCCAATCTCGGTGGAAGTCCAAGTAACTGAAAGCGGCAAAAGCTGCTTTTGCAAGCCCATGAAGTCTGTCTTTCTCTCTCCCCCACGGAAAGACATTCCTAAAGTAAAACTACCTCCCCATGTGACTTGTTTCAATCTCAAGGATTACCCTTTTCACAGCAAGCGTGCAAATAGATCTATGTTCAAATATGCT

Protein sequence

KTCLCCCTKVKDPISVEVQVTESGKSCFCKPMKSVFLSPPRKDIPKVKLPPHVTCFNLKDYPFHSKRANRSMFKYA
Homology
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BLAST of MS022295 vs. ExPASy TrEMBL
Match: A0A0A0K546 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031680 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.8e-12
Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0 

Query: 1  KTCLCCCTKVKDPISVEVQVTESGKSC-FCKPMK-SVFLS-PPRKDIPKVKLPPHVTCF- 60
          KTCLC CTK K    VE+QVTES KS  F  P K ++FLS  PRK+I KVKL PH  CF 
Sbjct: 5  KTCLCYCTKDK----VEIQVTESSKSATFASPRKRALFLSLTPRKEITKVKLTPHGNCFQ 64

Query: 61 -NLKDYPFHSKRANRSMFKYA 77
           NLK+ PFHSK A+RSM K A
Sbjct: 65 INLKENPFHSKSADRSMLKCA 81

The following BLAST results are available for this feature:
BLAST of MS022295 vs.
Match NameE-valueIdentityDescription
BLAST of MS022295 vs.
Match NameE-valueIdentityDescription
BLAST of MS022295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5469.8e-1261.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031680 PE=4 SV=1[more]
BLAST of MS022295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS022295.1MS022295.1mRNA