MS021255 (gene) Bitter gourd (TR) v1

Overview
NameMS021255
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold358: 510899 .. 511089 (-)
RNA-Seq ExpressionMS021255
SyntenyMS021255
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTATGCCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG

mRNA sequence

TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTACCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG

Coding sequence (CDS)

TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTACCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG

Protein sequence

WGMRKKTQKWGKARVAREREKGREETVLVREKASTCRWVPFVVLGGTVPFLKDILRSWLGDQP
Homology
[Close]
BLAST of MS021255 vs. NCBI nr
Match: KGN55079.1 (hypothetical protein Csa_011998 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16
Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  WGMRK--KTQKWGKARVARERE---KGREETVLVREKASTCRWV-PFVVLGGTVPFLKDI 60
          WGM +   TQKWGK RV + +E   KGREETVLVREKASTCRWV PFVVL GTVPFLK I
Sbjct: 23 WGMAEWVVTQKWGKTRVGKGKEKEKKGREETVLVREKASTCRWVLPFVVLEGTVPFLKAI 82

Query: 61 LRSWLGDQP 64
          L SWLGDQP
Sbjct: 83 LLSWLGDQP 91

[Close]
BLAST of MS021255 vs. ExPASy TrEMBL
Match: A0A0A0L228 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627780 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.4e-17
Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  WGMRK--KTQKWGKARVARERE---KGREETVLVREKASTCRWV-PFVVLGGTVPFLKDI 60
          WGM +   TQKWGK RV + +E   KGREETVLVREKASTCRWV PFVVL GTVPFLK I
Sbjct: 23 WGMAEWVVTQKWGKTRVGKGKEKEKKGREETVLVREKASTCRWVLPFVVLEGTVPFLKAI 82

Query: 61 LRSWLGDQP 64
          L SWLGDQP
Sbjct: 83 LLSWLGDQP 91

The following BLAST results are available for this feature:
BLAST of MS021255 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55079.11.7e-1675.36hypothetical protein Csa_011998 [Cucumis sativus][more]
BLAST of MS021255 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS021255 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2288.4e-1775.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627780 PE=4 SV=1[more]
BLAST of MS021255 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021255.1MS021255.1mRNA