MS021229 (gene) Bitter gourd (TR) v1

Overview
NameMS021229
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRan BP2/NZF zinc finger-like superfamily protein
Locationscaffold358: 324495 .. 327029 (-)
RNA-Seq ExpressionMS021229
SyntenyMS021229
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGTGGTTGAGAGCGGATTCGAGAGGTAGTGGGAAATTGACGAGGAAGGGGAAGCCTGGAAGCTTATATGTATTGGTTTCCAAACAAAATGGATGCGCTGAGAGGCGCGAGGTGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAATTTAGCTGTAACTGTGGTTAATCTTATGATTTCTCATCGTTAATGCCTTAAAGTAGATATATCTGTTTCGTTTGTGTGTAATTTTTTGAGAATTAGGGAGAGGAGATCATGTGTTTGATGAACTGGGTAGCTTTTAGCCTTTTGCCACCTTCAATCTGATCTATGAAGTATGAAGTATAAAGGATGATGTGCTAGAATAAGAAAATCGAAAATGTTACGAGTGAGGGACGATAAAACTATATCTCACGTCATTGAGGGGGAAAATTATTATTATTTTAATTCGTGAATTGATGCCAATTAATAGCAAATGGTGACATGAAACTACCTGAATAGATTACAATGAATCAAAACATCCAGCAGTATCTGTCTTTCAGCTTATGCAATGACATGGGGAAACCATCCTTAGTTCTAGCTTTGGGTTTTTTATAACATGGTCATATGCATCTTCTGCCATTTAAGACGAATTGAAGAAGTTGAGGTCATTCGGTTGGTTTGAGGATGGAGGGTCCTTTCATGTCGGTTTTAAACGTAAGAAGTGTGATTAGATTCTGAGGCCTTAGATTATTCCTAATATATTTTGTTTGTATCGTACATGTTAAGATCATAGTGTGAATCATTAGCCTTATTTACATTGATTTGGTAGTTAGGATATGATTTTTTTTAATTATTATTATTTTTTTTTTTTTGATAACCGGAAGTTGGAGCTTTGCTCCCATATACCTAGGGGCATTCGCGCCTGCCCCAAGGTCTGGTCCCGAGAGATATCAAGAGTTTTTAGTATTAAGCTCACCAGAAAGTTCGAATTTGAGACTTCTAAGCCAATATGACCAAAAGACCCCAAGCTTAACTGGACTACCCTTTGGAGGCTAGGATATGAATACTATAAAAAGATATTTCTTGTTCACTTACAAAAGAATGATCATTGTCAATATCAAAAGATCAATTTTCATATTCAAGTGTATGGAATAACTGGTGCTGTTACTGTCCCAAACTGATGTTTTTGTTGGGTTGGTCAGTTTATAGAGGATGGTTGGTTCAGTCGGTCCAGTTTCCTCAATTTATTTTTTCACGTCTCTTTGGTCGGTTCATTGACAATTTTCATCCAAAACCAACTTGAACCAAACCTTAGCTAATTGTGCTGCTGACTGAACATAATCTTCCCCTCCACGATATCCGTGCATGTCTTTGCGTGTTCTTGTTCATGCTGCTTGATAAAGTGCTCGAAGCCTTGTGCTACTGATAATTCAAGATTGTACAAAATGTCGATGCGCCAAATAACCACTGTAGAGTATTCAGTGCAATATTCCTAATAAATTATTGAATCTAACATTCTGATTACAAAGGAAATAATTTCTCCATTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTACCCAGACATCCCTATTGTATCATGTGTTGAACACTGAGTCTTGGGATTTTCAGATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTAAGCAAAAGCTTCGTGAATATTACTTTCCTTCTTCTATTACCATTTAACTATCTAGTATAATTTTTCGGCTTTGTTTTCTTCCTTTTCATATTACCCGCAGGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC

mRNA sequence

ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC

Coding sequence (CDS)

ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC

Protein sequence

MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDVNRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQDIEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNLNLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN
Homology
BLAST of MS021229 vs. NCBI nr
Match: XP_022138762.1 (uncharacterized protein LOC111009818 [Momordica charantia])

HSP 1 Score: 422.2 bits (1084), Expect = 3.7e-114
Identity = 222/264 (84.09%), Postives = 223/264 (84.47%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MS+FRALHRHIDSYLKLRYHFF SQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGA--------------- 120
           NRDIRTDFVVDGAVRSNRS ECRERERRNQDNVLEGSSGESERGA               
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 -----------------------RMREDALVRKELSQDIEMLVRHLYGEGYFSYANFLPD 180
                                  RMREDALVRKELS DIEMLVRHLYGEGYFSYANFLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 227
           NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

BLAST of MS021229 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-107
Identity = 216/288 (75.00%), Postives = 231/288 (80.21%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS  SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSMSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR+D VV+   RS  S        RN+DNVL+G      R    REDALVRKELS D
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+YANFLPDNKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTAR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L IPED+KASVSRLLKEILKLSPTVSRN
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of MS021229 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-107
Identity = 215/288 (74.65%), Postives = 232/288 (80.56%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS++SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR D VV+   RS  S        RN+DNVL+G      R    REDALVRKELS D
Sbjct: 61  KRNIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+YANFLPDNKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTAR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L IPED+KASVSRLLKEILKLSPTVSR+
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

BLAST of MS021229 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107
Identity = 215/288 (74.65%), Postives = 231/288 (80.21%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS+ SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR+D VV+   RS  S        RN+DNVL+G      R    REDALVRKELS D
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+YANFLPDNKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPS AR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L IPED+KASVSRLLKEILKLSPTVSRN
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of MS021229 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-106
Identity = 212/288 (73.61%), Postives = 233/288 (80.90%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS++SLQ H+L+S SRR+R F  +I+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLSSTSRRSRTFLPEIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR+D VV+   RS  S        RN+DNVL+G      R    REDALVRKELS D
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VR+LY EGYF+YANFLPDNKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRYLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTAR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L +PED+KASVSRLLKEILKLSPTVSRN
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIVPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.8e-114
Identity = 222/264 (84.09%), Postives = 223/264 (84.47%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MS+FRALHRHIDSYLKLRYHFF SQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGA--------------- 120
           NRDIRTDFVVDGAVRSNRS ECRERERRNQDNVLEGSSGESERGA               
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 -----------------------RMREDALVRKELSQDIEMLVRHLYGEGYFSYANFLPD 180
                                  RMREDALVRKELS DIEMLVRHLYGEGYFSYANFLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 227
           NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 9.5e-108
Identity = 215/288 (74.65%), Postives = 232/288 (80.56%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS++SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR D VV+   RS  S        RN+DNVL+G      R    REDALVRKELS D
Sbjct: 61  KRNIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+YANFLPDNKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTAR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L IPED+KASVSRLLKEILKLSPTVSR+
Sbjct: 241 NLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106
Identity = 213/288 (73.96%), Postives = 232/288 (80.56%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LHR IDS  +L  +FFSSQS++SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
            R+IR+D VV+   RS  S        RN+DNVL+G      R    RE+ALVRKELS D
Sbjct: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREILKRENALVRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+Y+NFLPDNKLVLSYFE RHGRDFIKSAAERF RDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTAR+DVF+AKRLRKFF IQEDTVCH C LR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NLAVVM VITQY L A PK L IPED+KASVSRLLKEILKLSPTVSRN
Sbjct: 241 NLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 4.1e-95
Identity = 195/288 (67.71%), Postives = 217/288 (75.35%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR LH  I          F+SQS+ SLQ H L S S   R+FSL I E I PEIV  
Sbjct: 1   MSRFRPLHSQI--------QLFNSQSTISLQFHLLPSTS---RSFSLNIGERIAPEIVPG 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
           NR+    F+   A  S+ S + +E + RN++ VL+G  G        REDAL+RK+LS D
Sbjct: 61  NRNTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM VRHLY EGYF+YANFLPDNK VLSYFE RHGRDFIKSAA+RFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVA  GCPSTARKDVF+AKRLRKFF IQEDTVCHKCILR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NL VV+ V TQYAL+A P+ L IPED+KASVSRLLKEIL LSPTVSRN
Sbjct: 241 NLGVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.8e-90
Identity = 191/288 (66.32%), Postives = 212/288 (73.61%), Query Frame = 0

Query: 1   MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60
           MSRFR L+  I          F+SQS+ SLQ H L S S   R+FSLKI EGI PEIV  
Sbjct: 1   MSRFRPLYSQI--------LLFNSQSTISLQFHLLPSTS---RSFSLKIGEGIEPEIVPA 60

Query: 61  NRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQD 120
             +    F+   A  SN S +  E +  N++ VL+G  G        REDAL+RKELS D
Sbjct: 61  KTNTPPAFLSREAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPD 120

Query: 121 IEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           +EM  RHLY EGYF+YANFLP NK VLSYFE R GR+FIKS A+RFGRDNQEIAKWLSGS
Sbjct: 121 MEMFARHLYREGYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGS 180

Query: 181 DLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNL 240
           DLRKVAL GCPSTARKDVF+AKRLRKFF IQEDTVCHKCILR SCKYVNQ VWN  TKNL
Sbjct: 181 DLRKVALFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNL 240

Query: 241 NLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN 289
           NL VV+ VITQYAL+A P+ L IPED+KASVSRLLKEIL LS TVSRN
Sbjct: 241 NLGVVLQVITQYALEAIPEQLIIPEDIKASVSRLLKEILNLSQTVSRN 277

BLAST of MS021229 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). )

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-47
Identity = 98/205 (47.80%), Postives = 138/205 (67.32%), Query Frame = 0

Query: 83  RERERRNQDNVLEG-SSGESERGARMREDAL-VRKELSQDIEMLVRHLYGEGYFSYANFL 142
           +  +R N   + +G    E ++ ++ +ED + V KEL  ++   VR L+ EGY + ANF+
Sbjct: 105 QNEKRHNLYKLFKGDEEKEVKKHSKEKEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFI 164

Query: 143 PDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFS 202
              KL +   +  + R F+K AAERFG+D QEIAKWLSGSDL+K+ L GCPS  ++ VF+
Sbjct: 165 TGEKLDMGNLDEEYARTFVKFAAERFGKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFA 224

Query: 203 AKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNLNLAVVMNVITQYALDAGPKH 262
           AK LR FF I E+ VC KC+L+  CK+ NQSVW+G TK+L+L+VVM VIT Y LD     
Sbjct: 225 AKTLRNFFDIHENNVCEKCVLKEKCKFPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPK 284

Query: 263 LRIPEDMKASVSRLLKEILKLSPTV 286
           L++P++++ SVSRLL EI  LS T+
Sbjct: 285 LQVPQEVQDSVSRLLTEIQNLSRTI 309

BLAST of MS021229 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.3e-12
Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 0

Query: 159 IKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHK 218
           +++A   FG+D  +I + LS +D++ +   GCP+T RK VFS K LRK   + E  VC  
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 219 CILRHSCKYVNQSVWNGSTKNLNLAVVMNVITQYALD-----AGPKHLRIPEDMKASVSR 278
           C LR+SC+     +            +M ++  Y  D        K L   + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 279 LLKEILKLS 283
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

BLAST of MS021229 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10
Identity = 54/168 (32.14%), Postives = 78/168 (46.43%), Query Frame = 0

Query: 124 LVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 183
           L+  L  +GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++
Sbjct: 52  LMGMLAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIK 111

Query: 184 KVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNLNLA 243
            +A  GCPST RK V S KRLR + GI E  VC  C LR  C+           +     
Sbjct: 112 VIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQA--RDDEGARTI 171

Query: 244 VVMNVITQYALDA-GPK------HLRIPEDMKASVSRLLKEILKLSPT 285
            VM ++  Y LD+  P         ++ ED   SV +LL+E +  S T
Sbjct: 172 DVMRLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of MS021229 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10
Identity = 54/168 (32.14%), Postives = 78/168 (46.43%), Query Frame = 0

Query: 124 LVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLR 183
           L+  L  +GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++
Sbjct: 52  LMGMLAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIK 111

Query: 184 KVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNLNLA 243
            +A  GCPST RK V S KRLR + GI E  VC  C LR  C+           +     
Sbjct: 112 VIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQA--RDDEGARTI 171

Query: 244 VVMNVITQYALDA-GPK------HLRIPEDMKASVSRLLKEILKLSPT 285
            VM ++  Y LD+  P         ++ ED   SV +LL+E +  S T
Sbjct: 172 DVMRLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of MS021229 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 37/131 (28.24%), Postives = 62/131 (47.33%), Query Frame = 0

Query: 159 IKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHK 218
           +K A   F RD  ++ + LS  D++ +   GCP+  RK V S+KR+R    + E  VC  
Sbjct: 94  VKDACLSFARDRYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGS 153

Query: 219 CILRHSCK----YVNQSVWNGSTKNLNLAVVMNVITQYALDAGPKHLRIP---EDMKASV 278
           C LR SC      +  +  +  T ++   ++ N +    +  G     +P   E +  S 
Sbjct: 154 CDLRSSCDRAYVILKDTEADARTVDVMRLLLFNALDSIVISRG----EVPPGKELVHESA 213

Query: 279 SRLLKEILKLS 283
            RLL E+++ S
Sbjct: 214 RRLLLELVEFS 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022138762.13.7e-11484.09uncharacterized protein LOC111009818 [Momordica charantia][more]
KAG7024649.11.5e-10775.00hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022935982.12.0e-10774.65uncharacterized protein LOC111442720 [Cucurbita moschata][more]
KAG6591767.14.4e-10774.65hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023536478.11.7e-10673.61uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CC231.8e-11484.09uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1F7479.5e-10874.65uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC1114427... [more]
A0A6J1IGS81.0e-10673.96uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088... [more]
A0A0A0L4J94.1e-9567.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1[more]
A0A5A7VHD01.8e-9066.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT1G53460.11.4e-4747.80BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfa... [more]
AT1G55040.14.3e-1233.33zinc finger (Ran-binding) family protein [more]
AT1G70650.19.0e-1032.14Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70650.29.0e-1032.14Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G48570.12.9e-0828.24zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..108
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 90..281
NoneNo IPR availablePANTHERPTHR23111:SF24OS01G0203300 PROTEINcoord: 90..281

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021229.1MS021229.1mRNA