MS021229 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGTGGTTGAGAGCGGATTCGAGAGGTAGTGGGAAATTGACGAGGAAGGGGAAGCCTGGAAGCTTATATGTATTGGTTTCCAAACAAAATGGATGCGCTGAGAGGCGCGAGGTGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAATTTAGCTGTAACTGTGGTTAATCTTATGATTTCTCATCGTTAATGCCTTAAAGTAGATATATCTGTTTCGTTTGTGTGTAATTTTTTGAGAATTAGGGAGAGGAGATCATGTGTTTGATGAACTGGGTAGCTTTTAGCCTTTTGCCACCTTCAATCTGATCTATGAAGTATGAAGTATAAAGGATGATGTGCTAGAATAAGAAAATCGAAAATGTTACGAGTGAGGGACGATAAAACTATATCTCACGTCATTGAGGGGGAAAATTATTATTATTTTAATTCGTGAATTGATGCCAATTAATAGCAAATGGTGACATGAAACTACCTGAATAGATTACAATGAATCAAAACATCCAGCAGTATCTGTCTTTCAGCTTATGCAATGACATGGGGAAACCATCCTTAGTTCTAGCTTTGGGTTTTTTATAACATGGTCATATGCATCTTCTGCCATTTAAGACGAATTGAAGAAGTTGAGGTCATTCGGTTGGTTTGAGGATGGAGGGTCCTTTCATGTCGGTTTTAAACGTAAGAAGTGTGATTAGATTCTGAGGCCTTAGATTATTCCTAATATATTTTGTTTGTATCGTACATGTTAAGATCATAGTGTGAATCATTAGCCTTATTTACATTGATTTGGTAGTTAGGATATGATTTTTTTTAATTATTATTATTTTTTTTTTTTTGATAACCGGAAGTTGGAGCTTTGCTCCCATATACCTAGGGGCATTCGCGCCTGCCCCAAGGTCTGGTCCCGAGAGATATCAAGAGTTTTTAGTATTAAGCTCACCAGAAAGTTCGAATTTGAGACTTCTAAGCCAATATGACCAAAAGACCCCAAGCTTAACTGGACTACCCTTTGGAGGCTAGGATATGAATACTATAAAAAGATATTTCTTGTTCACTTACAAAAGAATGATCATTGTCAATATCAAAAGATCAATTTTCATATTCAAGTGTATGGAATAACTGGTGCTGTTACTGTCCCAAACTGATGTTTTTGTTGGGTTGGTCAGTTTATAGAGGATGGTTGGTTCAGTCGGTCCAGTTTCCTCAATTTATTTTTTCACGTCTCTTTGGTCGGTTCATTGACAATTTTCATCCAAAACCAACTTGAACCAAACCTTAGCTAATTGTGCTGCTGACTGAACATAATCTTCCCCTCCACGATATCCGTGCATGTCTTTGCGTGTTCTTGTTCATGCTGCTTGATAAAGTGCTCGAAGCCTTGTGCTACTGATAATTCAAGATTGTACAAAATGTCGATGCGCCAAATAACCACTGTAGAGTATTCAGTGCAATATTCCTAATAAATTATTGAATCTAACATTCTGATTACAAAGGAAATAATTTCTCCATTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTACCCAGACATCCCTATTGTATCATGTGTTGAACACTGAGTCTTGGGATTTTCAGATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTAAGCAAAAGCTTCGTGAATATTACTTTCCTTCTTCTATTACCATTTAACTATCTAGTATAATTTTTCGGCTTTGTTTTCTTCCTTTTCATATTACCCGCAGGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC ATGTCTCGGTTCAGAGCTCTTCACCGACACATCGATTCCTATCTGAAACTCCGATACCATTTCTTCAGTTCACAGTCTTCACATTCCCTCCAAGTTCACACTCTTACCTCCATTTCTCGAAGAACTCGAAATTTCTCGTTGAAAATCGAAGAGGGGATCGGACCAGAAATCGTGGACGTAAATAGGGATATACGTACGGATTTTGTGGTTGATGGAGCCGTAAGATCGAACCGAAGTGAGGAATGTCGCGAGCGCGAACGCCGAAATCAAGACAATGTGCTGGAAGGGAGCTCGGGGGAATCGGAGCGCGGAGCGAGGATGAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCAGGACATAGAGATGCTCGTGAGGCATTTGTACGGGGAAGGATATTTTAGTTATGCGAATTTCTTGCCCGATAACAAATTGGTTCTTAGCTACTTTGAGTATCGCCATGGACGGGATTTTATCAAGTCTGCAGCTGAGAGATTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCCGGCAGTGACTTGAGAAAGGTTGCTCTCTTAGGATGCCCATCCACTGCAAGAAAAGATGTGTTTTCTGCTAAGAGGCTGCGAAAATTTTTTGGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACACTCATGCAAGTATGTGAATCAAAGTGTTTGGAATGGCAGCACCAAGAATTTGAATTTGGCTGTCGTCATGAATGTTATTACTCAATATGCCTTGGATGCAGGACCGAAACACCTTCGAATACCCGAAGATATGAAGGCTTCTGTAAGCCGGTTGCTGAAAGAGATATTGAAACTAAGCCCAACCGTGTCGAGGAAC MSRFRALHRHIDSYLKLRYHFFSSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDVNRDIRTDFVVDGAVRSNRSEECRERERRNQDNVLEGSSGESERGARMREDALVRKELSQDIEMLVRHLYGEGYFSYANFLPDNKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAKRLRKFFGIQEDTVCHKCILRHSCKYVNQSVWNGSTKNLNLAVVMNVITQYALDAGPKHLRIPEDMKASVSRLLKEILKLSPTVSRN Homology
BLAST of MS021229 vs. NCBI nr
Match: XP_022138762.1 (uncharacterized protein LOC111009818 [Momordica charantia]) HSP 1 Score: 422.2 bits (1084), Expect = 3.7e-114 Identity = 222/264 (84.09%), Postives = 223/264 (84.47%), Query Frame = 0
BLAST of MS021229 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-107 Identity = 216/288 (75.00%), Postives = 231/288 (80.21%), Query Frame = 0
BLAST of MS021229 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata]) HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-107 Identity = 215/288 (74.65%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of MS021229 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107 Identity = 215/288 (74.65%), Postives = 231/288 (80.21%), Query Frame = 0
BLAST of MS021229 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-106 Identity = 212/288 (73.61%), Postives = 233/288 (80.90%), Query Frame = 0
BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.8e-114 Identity = 222/264 (84.09%), Postives = 223/264 (84.47%), Query Frame = 0
BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 9.5e-108 Identity = 215/288 (74.65%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106 Identity = 213/288 (73.96%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 4.1e-95 Identity = 195/288 (67.71%), Postives = 217/288 (75.35%), Query Frame = 0
BLAST of MS021229 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.8e-90 Identity = 191/288 (66.32%), Postives = 212/288 (73.61%), Query Frame = 0
BLAST of MS021229 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 187.6 bits (475), Expect = 1.4e-47 Identity = 98/205 (47.80%), Postives = 138/205 (67.32%), Query Frame = 0
BLAST of MS021229 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.3e-12 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 0
BLAST of MS021229 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10 Identity = 54/168 (32.14%), Postives = 78/168 (46.43%), Query Frame = 0
BLAST of MS021229 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10 Identity = 54/168 (32.14%), Postives = 78/168 (46.43%), Query Frame = 0
BLAST of MS021229 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08 Identity = 37/131 (28.24%), Postives = 62/131 (47.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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