MS019557 (gene) Bitter gourd (TR) v1

Overview


Name	MS019557
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	dehydration-responsive element-binding protein 1D-like
Location	scaffold729: 510712 .. 511341 (+)
RNA-Seq Expression	MS019557
Synteny	MS019557

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCTTCACCTTCAAGCTCCACAGCCGACAACTCTCCGCCGCAGACGGCGGCGGGGAAGAAACGGAAGGCTGGCCGGAAAAAGTTTCAGGAGACACGCCACCCGATTTTCAAAGGAGTCCGCCAGAGAAATGGGAAGTGGGTATGCGAGCTCCGGCGGCCGAACAATAAAAAGTCAAGCTTTTGGGTTGGGACCTTCACAAGCCCGAAAATGGCGGCCGTCGCGTACGACGTTGCTGCATTGGCTCTTAAAGGCGAGTCCGCGTCGCTCAATTTTCCCGAGTTGGCTCACTCGTTCCCGCGAGCTACATCATCGTCAGCCTCCATAAATCATATACGTACGATGGCGGTTGAGGCTGCGGAGGCGGTTTCATCGGATGGCATATTGTCGATTCCGTCTAATCTATCATCGTCGTTGTCGTTGTGTTCCTCTTCAGTGTCGGGGGAGAAGGTGGTGCCGGAAGGCTCTTCAAAGAGGTTGTTTATTGACGAGGAGGAGTTGTTTAACATGCCGGCGATTATTGCCGGCATGGCGGAGGGACTGATTTTGACACCGCCGGGAATGAAGAGGGGTTTCAATTGGGAAGAGTGTGAGAATACGACGGAATTGTCGTTGTGGAGTGACGAG

mRNA sequence

ATGACTTCTTCACCTTCAAGCTCCACAGCCGACAACTCTCCGCCGCAGACGGCGGCGGGGAAGAAACGGAAGGCTGGCCGGAAAAAGTTTCAGGAGACACGCCACCCGATTTTCAAAGGAGTCCGCCAGAGAAATGGGAAGTGGGTATGCGAGCTCCGGCGGCCGAACAATAAAAAGTCAAGCTTTTGGGTTGGGACCTTCACAAGCCCGAAAATGGCGGCCGTCGCGTACGACGTTGCTGCATTGGCTCTTAAAGGCGAGTCCGCGTCGCTCAATTTTCCCGAGTTGGCTCACTCGTTCCCGCGAGCTACATCATCGTCAGCCTCCATAAATCATATACGTACGATGGCGGTTGAGGCTGCGGAGGCGGTTTCATCGGATGGCATATTGTCGATTCCGTCTAATCTATCATCGTCGTTGTCGTTGTGTTCCTCTTCAGTGTCGGGGGAGAAGGTGGTGCCGGAAGGCTCTTCAAAGAGGTTGTTTATTGACGAGGAGGAGTTGTTTAACATGCCGGCGATTATTGCCGGCATGGCGGAGGGACTGATTTTGACACCGCCGGGAATGAAGAGGGGTTTCAATTGGGAAGAGTGTGAGAATACGACGGAATTGTCGTTGTGGAGTGACGAG

Coding sequence (CDS)

ATGACTTCTTCACCTTCAAGCTCCACAGCCGACAACTCTCCGCCGCAGACGGCGGCGGGGAAGAAACGGAAGGCTGGCCGGAAAAAGTTTCAGGAGACACGCCACCCGATTTTCAAAGGAGTCCGCCAGAGAAATGGGAAGTGGGTATGCGAGCTCCGGCGGCCGAACAATAAAAAGTCAAGCTTTTGGGTTGGGACCTTCACAAGCCCGAAAATGGCGGCCGTCGCGTACGACGTTGCTGCATTGGCTCTTAAAGGCGAGTCCGCGTCGCTCAATTTTCCCGAGTTGGCTCACTCGTTCCCGCGAGCTACATCATCGTCAGCCTCCATAAATCATATACGTACGATGGCGGTTGAGGCTGCGGAGGCGGTTTCATCGGATGGCATATTGTCGATTCCGTCTAATCTATCATCGTCGTTGTCGTTGTGTTCCTCTTCAGTGTCGGGGGAGAAGGTGGTGCCGGAAGGCTCTTCAAAGAGGTTGTTTATTGACGAGGAGGAGTTGTTTAACATGCCGGCGATTATTGCCGGCATGGCGGAGGGACTGATTTTGACACCGCCGGGAATGAAGAGGGGTTTCAATTGGGAAGAGTGTGAGAATACGACGGAATTGTCGTTGTGGAGTGACGAG

Protein sequence

MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKSSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGLILTPPGMKRGFNWEECENTTELSLWSDE

Homology

[Close]

BLAST of MS019557 vs. NCBI nr
Match: XP_022144757.1 (dehydration-responsive element-binding protein 1D-like [Momordica charantia])

HSP 1 Score: 404.4 bits (1038), Expect = 5.8e-109
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60
           MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS
Sbjct: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60

Query: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120
           SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA
Sbjct: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120

Query: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180
           AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE
Sbjct: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180

Query: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 211
           GLILTPPGMKRGFNWEECENTTELSLWSDE
Sbjct: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 210

[Close]

BLAST of MS019557 vs. NCBI nr
Match: XP_022983374.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-69
Identity = 153/211 (72.51%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF SP+MAAVAYDV AL +KGESA LNFP   H FPR TSSS+SIN IRTMA+E
Sbjct: 61  STFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAME 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSSL LCSS +S EK++PE  ++RL +DEEE+FNMP IIAGMA
Sbjct: 121 AAEAFTSSNRL---SSLSSSL-LCSSLMSEEKMIPEVLTERLVLDEEEVFNMPVIIAGMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMKRGFNWEE E+T ELSLWSD+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWSDD 206

[Close]

BLAST of MS019557 vs. NCBI nr
Match: KAG7017431.1 (Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 4.5e-69
Identity = 153/211 (72.51%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF +P+MAAVAYDV AL +KGESA LNFP   H FPR TSSS+SIN IRTMAVE
Sbjct: 61  STFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVE 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSS SLCSS +S E V+PE  + RL +DEEE+FNMPAIIAGMA
Sbjct: 121 AAEAFTSSNRL---SSLSSS-SLCSSLMSEEMVIPEVLTDRLVLDEEEVFNMPAIIAGMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMKRGFNWEE E+T ELSLW+D+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of MS019557 vs. NCBI nr
Match: XP_022934612.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.9e-68
Identity = 152/211 (72.04%), Postives = 169/211 (80.09%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF +P+MAAVAYDV AL +KGESA LNFP   H FPR  SSS+SIN IRTMAVE
Sbjct: 61  STFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVE 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSS SLCSS  S EKV+P   + RL +DEEE+FNMPAIIAGMA
Sbjct: 121 AAEAFTSSNRL---SSLSSS-SLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMKRGFNWEE E+T ELSLW+D+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of MS019557 vs. NCBI nr
Match: XP_023528801.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 5.0e-68
Identity = 152/211 (72.04%), Postives = 169/211 (80.09%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF SP+MAAVAYDV AL +KGESA LNFP   H FPR TSSS+SIN IRTMAVE
Sbjct: 61  STFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVE 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSS SLCSS  S EKV P+  + RL +DEEE+FNMPAIIA MA
Sbjct: 121 AAEAFTSSNRL---SSLSSS-SLCSSLTSEEKVTPKVLTDRLVLDEEEVFNMPAIIADMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMK+GFNWEE E+T ELSLW+D+
Sbjct: 181 EGLILTPPGMKKGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of MS019557 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 88/209 (42.11%), Postives = 123/209 (58.85%), Query Frame = 0


Query: 4   SPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSF 63
           SP S +++ SP   ++  K++AGRKKF+ETRHPI++GVRQRN GKWVCE+R P NKKS  
Sbjct: 20  SPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREP-NKKSRI 79

Query: 64  WVGTFTSPKMAAVAYDVAALALKGESASLNFPELAH--SFPRATSSSASINHIRTMAVEA 123
           W+GTF + +MAA A+DVAALAL+G SA LNF + A     P  T        I+  A EA
Sbjct: 80  WLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCP----KEIQKAASEA 139

Query: 124 AEAVSSDGILSIPSNLSSSLSLCSSSV-SGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 183
           A A  ++         + +       V  GE+   E +    ++D+E L  MP     MA
Sbjct: 140 AMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMA 199

Query: 184 EGLILTPPGMKRGFNWEECENTTELSLWS 209
           EG++L PP +  G+N  + +   ++SLWS
Sbjct: 200 EGMLLPPPEV--GWNHNDFDGVGDVSLWS 221

[Close]

BLAST of MS019557 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 84/199 (42.21%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 11  DNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSFWVGTFTS 70
           D  P    +  K+ AGRKKF+ETRHPI++GVRQRN GKWV E+R P NKK+  W+GTF +
Sbjct: 21  DYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREP-NKKTRIWLGTFQT 80

Query: 71  PKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAEAVSSDGI 130
            +MAA A+DVAALAL+G SA LNF + A       S+ A    I+  A EAA A   +  
Sbjct: 81  AEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCA--KDIQKAAAEAALAFQDETC 140

Query: 131 LSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGLILTPPGM 190
            +  +N    +     ++      PE S    ++DEE +F MP ++  MAEG++L PP +
Sbjct: 141 DTTTTNHGLDM---EETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSV 200

Query: 191 KRGFNWEECENTTELSLWS 209
           +   N++  E   ++SLWS
Sbjct: 201 QWNHNYDG-EGDGDVSLWS 212

[Close]

BLAST of MS019557 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29
Identity = 87/206 (42.23%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 4   SPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSF 63
           SP SS  D SP    +  K+ AGRKKF+ETRHPI++GVRQRN GKWVCELR P NKK+  
Sbjct: 17  SPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREP-NKKTRI 76

Query: 64  WVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAE 123
           W+GTF + +MAA A+DVAA+AL+G SA LNF + A       S+ A    I+  A EA  
Sbjct: 77  WLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCA--KEIQKAAAEA-- 136

Query: 124 AVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGL 183
           A++    +   +  +  L +  + V      PE S    ++DEE +  M +++  MAEG+
Sbjct: 137 ALNFQDEMCHMTTDAHGLDMEETLVEA-IYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 196

Query: 184 ILTPPGMKRGFNWEECENTTELSLWS 209
           +L  P ++  +N+ + E   ++SLWS
Sbjct: 197 LLPSPSVQWNYNF-DVEGDDDVSLWS 215

[Close]

BLAST of MS019557 vs. ExPASy Swiss-Prot
Match: A2WZI4 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.1e-29
Identity = 90/225 (40.00%), Postives = 128/225 (56.89%), Query Frame = 0


Query: 2   TSSPSSSTADNSPPQTAAG-------KKRKAGRKKFQETRHPIFKGVRQRNG--KWVCEL 61
           TSS SSS+   SPP +  G        KR+AGRKKF+ETRHP+++GVR R G  +WVCE+
Sbjct: 6   TSSASSSSV--SPPSSPGGGHHHRLPPKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEV 65

Query: 62  RRPNNKKSSFWVGTFTSPKMAAVAYDVAALALKGE-SASLNFPELAHSFPRATSSSASIN 121
           R P   ++  W+GT+ +P+MAA A+DVAA+AL+GE  A LNFP+   + PRA   +AS  
Sbjct: 66  REP-QAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRA--RTASPE 125

Query: 122 HIRTMAVEAAEAV-SSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFN 181
            IR  A +AAE        L++P +     S       G      G    +F+DE+ +F+
Sbjct: 126 DIRLAAAQAAELYRRPPPPLALPEDPQEGTS------GGGATATSGRPAAVFVDEDAIFD 185

Query: 182 MPAIIAGMAEGLILTPPGMKRGF-NWEECENT-----TELSLWSD 210
           MP +I  MA G++LTPP + R   +W   ++       +  LW D
Sbjct: 186 MPGLIDDMARGMMLTPPAIGRSLDDWAAIDDDDDHYHMDYKLWMD 219

[Close]

BLAST of MS019557 vs. ExPASy Swiss-Prot
Match: Q8S9Z5 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica OX=39947 GN=DREB1F PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.1e-29
Identity = 90/225 (40.00%), Postives = 128/225 (56.89%), Query Frame = 0


Query: 2   TSSPSSSTADNSPPQTAAG-------KKRKAGRKKFQETRHPIFKGVRQRNG--KWVCEL 61
           TSS SSS+   SPP +  G        KR+AGRKKF+ETRHP+++GVR R G  +WVCE+
Sbjct: 6   TSSASSSSV--SPPSSPGGGHHHRLPPKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEV 65

Query: 62  RRPNNKKSSFWVGTFTSPKMAAVAYDVAALALKGE-SASLNFPELAHSFPRATSSSASIN 121
           R P   ++  W+GT+ +P+MAA A+DVAA+AL+GE  A LNFP+   + PRA   +AS  
Sbjct: 66  REP-QAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRA--RTASPE 125

Query: 122 HIRTMAVEAAEAV-SSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFN 181
            IR  A +AAE        L++P +     S       G      G    +F+DE+ +F+
Sbjct: 126 DIRLAAAQAAELYRRPPPPLALPEDPQEGTS------GGGATATSGRPAAVFVDEDAIFD 185

Query: 182 MPAIIAGMAEGLILTPPGMKRGF-NWEECENT-----TELSLWSD 210
           MP +I  MA G++LTPP + R   +W   ++       +  LW D
Sbjct: 186 MPGLIDDMARGMMLTPPAIGRSLDDWAAIDDDDDHYHMDYKLWMD 219

[Close]

BLAST of MS019557 vs. ExPASy TrEMBL
Match: A0A6J1CUL3 (dehydration-responsive element-binding protein 1D-like OS=Momordica charantia OX=3673 GN=LOC111014370 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.8e-109
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60
           MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS
Sbjct: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60

Query: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120
           SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA
Sbjct: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120

Query: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180
           AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE
Sbjct: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180

Query: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 211
           GLILTPPGMKRGFNWEECENTTELSLWSDE
Sbjct: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 210

[Close]

BLAST of MS019557 vs. ExPASy TrEMBL
Match: A0A6J1J762 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111481980 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.7e-70
Identity = 153/211 (72.51%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF SP+MAAVAYDV AL +KGESA LNFP   H FPR TSSS+SIN IRTMA+E
Sbjct: 61  STFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAME 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSSL LCSS +S EK++PE  ++RL +DEEE+FNMP IIAGMA
Sbjct: 121 AAEAFTSSNRL---SSLSSSL-LCSSLMSEEKMIPEVLTERLVLDEEEVFNMPVIIAGMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMKRGFNWEE E+T ELSLWSD+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWSDD 206

[Close]

BLAST of MS019557 vs. ExPASy TrEMBL
Match: A0A6J1F3A6 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111441748 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68
Identity = 152/211 (72.04%), Postives = 169/211 (80.09%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPP-QTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKK 60
           M SS SSST ++ PP Q  A  KRKAGRKKFQETRHPI+KGVRQRNGKWV ELR P NK 
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWP-NKN 60

Query: 61  SSFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVE 120
           S+FWVGTF +P+MAAVAYDV AL +KGESA LNFP   H FPR  SSS+SIN IRTMAVE
Sbjct: 61  STFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVE 120

Query: 121 AAEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 180
           AAEA +S   L   S+LSSS SLCSS  S EKV+P   + RL +DEEE+FNMPAIIAGMA
Sbjct: 121 AAEAFTSSNRL---SSLSSS-SLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMA 180

Query: 181 EGLILTPPGMKRGFNWEECENTTELSLWSDE 211
           EGLILTPPGMKRGFNWEE E+T ELSLW+D+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of MS019557 vs. ExPASy TrEMBL
Match: A0A5D3DNN2 (Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003570 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66
Identity = 147/210 (70.00%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60
           M SS SSST D+ PP T    KRKAGRKKFQETRHPI+KGVRQRNGKWVCELR+P NKKS
Sbjct: 1   MPSSSSSSTNDHLPPPTTVA-KRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQP-NKKS 60

Query: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120
           SFWVGTF SPK AA+AYDV ALA+KGES SLNFP  AHSFPR  SSS+SIN IR MA++ 
Sbjct: 61  SFWVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 120

Query: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180
           AE  +S  I+   S+ SS  SLC S +S EKVVP       F DEEE+FNMPAIIAG+AE
Sbjct: 121 AETFTSSDIMMPLSSPSSPSSLC-SLMSEEKVVP-----NYFWDEEEVFNMPAIIAGIAE 180

Query: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 211
           GLI+TPPGMKR F+WE+ ENT ELSLWS E
Sbjct: 181 GLIITPPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of MS019557 vs. ExPASy TrEMBL
Match: A0A1S3B6L0 (dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 GN=LOC103486580 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66
Identity = 147/210 (70.00%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MTSSPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRNGKWVCELRRPNNKKS 60
           M SS SSST D+ PP T    KRKAGRKKFQETRHPI+KGVRQRNGKWVCELR+P NKKS
Sbjct: 1   MPSSSSSSTNDHLPPPTTVA-KRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQP-NKKS 60

Query: 61  SFWVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEA 120
           SFWVGTF SPK AA+AYDV ALA+KGES SLNFP  AHSFPR  SSS+SIN IR MA++ 
Sbjct: 61  SFWVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 120

Query: 121 AEAVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAE 180
           AE  +S  I+   S+ SS  SLC S +S EKVVP       F DEEE+FNMPAIIAG+AE
Sbjct: 121 AETFTSSDIMMPLSSPSSPSSLC-SLMSEEKVVP-----NYFWDEEEVFNMPAIIAGIAE 180

Query: 181 GLILTPPGMKRGFNWEECENTTELSLWSDE 211
           GLI+TPPGMKR F+WE+ ENT ELSLWS E
Sbjct: 181 GLIITPPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of MS019557 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 134.8 bits (338), Expect = 8.0e-32
Identity = 88/209 (42.11%), Postives = 123/209 (58.85%), Query Frame = 0


Query: 4   SPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSF 63
           SP S +++ SP   ++  K++AGRKKF+ETRHPI++GVRQRN GKWVCE+R P NKKS  
Sbjct: 20  SPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREP-NKKSRI 79

Query: 64  WVGTFTSPKMAAVAYDVAALALKGESASLNFPELAH--SFPRATSSSASINHIRTMAVEA 123
           W+GTF + +MAA A+DVAALAL+G SA LNF + A     P  T        I+  A EA
Sbjct: 80  WLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCP----KEIQKAASEA 139

Query: 124 AEAVSSDGILSIPSNLSSSLSLCSSSV-SGEKVVPEGSSKRLFIDEEELFNMPAIIAGMA 183
           A A  ++         + +       V  GE+   E +    ++D+E L  MP     MA
Sbjct: 140 AMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMA 199

Query: 184 EGLILTPPGMKRGFNWEECENTTELSLWS 209
           EG++L PP +  G+N  + +   ++SLWS
Sbjct: 200 EGMLLPPPEV--GWNHNDFDGVGDVSLWS 221

[Close]

BLAST of MS019557 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 84/199 (42.21%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 11  DNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSFWVGTFTS 70
           D  P    +  K+ AGRKKF+ETRHPI++GVRQRN GKWV E+R P NKK+  W+GTF +
Sbjct: 21  DYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREP-NKKTRIWLGTFQT 80

Query: 71  PKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAEAVSSDGI 130
            +MAA A+DVAALAL+G SA LNF + A       S+ A    I+  A EAA A   +  
Sbjct: 81  AEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCA--KDIQKAAAEAALAFQDETC 140

Query: 131 LSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGLILTPPGM 190
            +  +N    +     ++      PE S    ++DEE +F MP ++  MAEG++L PP +
Sbjct: 141 DTTTTNHGLDM---EETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSV 200

Query: 191 KRGFNWEECENTTELSLWS 209
           +   N++  E   ++SLWS
Sbjct: 201 QWNHNYDG-EGDGDVSLWS 212

[Close]

BLAST of MS019557 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 87/206 (42.23%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 4   SPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSF 63
           SP SS  D SP    +  K+ AGRKKF+ETRHPI++GVRQRN GKWVCELR P NKK+  
Sbjct: 17  SPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREP-NKKTRI 76

Query: 64  WVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAE 123
           W+GTF + +MAA A+DVAA+AL+G SA LNF + A       S+ A    I+  A EA  
Sbjct: 77  WLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCA--KEIQKAAAEA-- 136

Query: 124 AVSSDGILSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGL 183
           A++    +   +  +  L +  + V      PE S    ++DEE +  M +++  MAEG+
Sbjct: 137 ALNFQDEMCHMTTDAHGLDMEETLVEA-IYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 196

Query: 184 ILTPPGMKRGFNWEECENTTELSLWS 209
           +L  P ++  +N+ + E   ++SLWS
Sbjct: 197 LLPSPSVQWNYNF-DVEGDDDVSLWS 215

[Close]

BLAST of MS019557 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 123.6 bits (309), Expect = 1.8e-28
Identity = 84/207 (40.58%), Postives = 121/207 (58.45%), Query Frame = 0


Query: 4   SPSSSTADNSPPQTAAGKKRKAGRKKFQETRHPIFKGVRQRN-GKWVCELRRPNNKKSSF 63
           S  SS  D  P   ++  K+ AGRKKF+ETRHPI++GVR+RN GKWVCE+R P NKK+  
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREP-NKKTRI 76

Query: 64  WVGTFTSPKMAAVAYDVAALALKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAE 123
           W+GTF + +MAA A+DVAALAL+G SA LNF + A       S+ A    I+  A EAA 
Sbjct: 77  WLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCA--KDIQKAAAEAAL 136

Query: 124 AVSSDGI-LSIPSNLSSSLSLCSSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEG 183
           A   +    +         +L  +  + E+     S    ++ +E +F MP+++A MAEG
Sbjct: 137 AFQDEMCDATTDHGFDMEETLVEAIYTAEQ-----SENAFYMHDEAMFEMPSLLANMAEG 196

Query: 184 LILTPPGMKRGFNWEECENTTELSLWS 209
           ++L  P ++   N E   +  ++SLWS
Sbjct: 197 MLLPLPSVQWNHNHEVDGDDDDVSLWS 215

[Close]

BLAST of MS019557 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-25
Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 26  GRKKFQETRHPIFKGVRQR--NGKWVCELRRPNNKKSSFWVGTFTSPKMAAVAYDVAALA 85
           G  K    RHP+++GVRQR  + KWV E+R P  K +  W+GTF++P+MAA+AYDVAALA
Sbjct: 3   GTSKDNGGRHPLYRGVRQRKNSNKWVSEIREP-RKPNRIWLGTFSTPEMAAIAYDVAALA 62

Query: 86  LKGESASLNFPELAHSFPRATSSSASINHIRTMAVEAAEAVSSDGILSIPSNLSSSLSLC 145
           LKG  A LNFP    S P  TS S +       +  AA   + D I+   +N  +S   C
Sbjct: 63  LKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVAC 122

Query: 146 SSSVSGEKVVPEGSSKRLFIDEEELFNMPAIIAGMAEGLILTPP 188
            +S        + ++   F+DE+ +F+MP ++  MAEG++L+PP
Sbjct: 123 MNSSY------DNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPP 159

The following BLAST results are available for this feature:

BLAST of MS019557 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144757.1	5.8e-109	100.00	dehydration-responsive element-binding protein 1D-like [Momordica charantia]	[more]
XP_022983374.1	1.2e-69	72.51	dehydration-responsive element-binding protein 1B-like [Cucurbita maxima]	[more]
KAG7017431.1	4.5e-69	72.51	Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosper...	[more]
XP_022934612.1	2.9e-68	72.04	dehydration-responsive element-binding protein 1B-like [Cucurbita moschata]	[more]
XP_023528801.1	5.0e-68	72.04	dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pe...	[more]

BLAST of MS019557 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ93	1.1e-30	42.11	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
P93835	2.1e-29	42.21	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	2.8e-29	42.23	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
A2WZI4	8.1e-29	40.00	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ...	[more]
Q8S9Z5	8.1e-29	40.00	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonic...	[more]

BLAST of MS019557 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUL3	2.8e-109	100.00	dehydration-responsive element-binding protein 1D-like OS=Momordica charantia OX...	[more]
A0A6J1J762	5.7e-70	72.51	dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1F3A6	1.4e-68	72.04	dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=...	[more]
A0A5D3DNN2	1.7e-66	70.00	Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. maku...	[more]
A0A1S3B6L0	1.7e-66	70.00	dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 G...	[more]

BLAST of MS019557 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51990.1	8.0e-32	42.11	C-repeat-binding factor 4	[more]
AT4G25490.1	1.5e-30	42.21	C-repeat/DRE binding factor 1	[more]
AT4G25470.1	2.0e-30	42.23	C-repeat/DRE binding factor 2	[more]
AT4G25480.1	1.8e-28	40.58	dehydration response element B1A	[more]
AT2G36450.1	2.5e-25	40.85	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 38..49 score: 35.45 coord: 76..96 score: 54.81
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 37..100 e-value: 2.3E-21 score: 87.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 37..87 e-value: 3.1E-11 score: 43.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 37..94 score: 17.398233
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 36..96 e-value: 2.81036E-22 score: 83.8603
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 37..95 e-value: 7.2E-19 score: 69.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 6..208
None	No IPR available	PANTHER	PTHR31839:SF39	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B-LIKE	coord: 6..208
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 37..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019557.1	MS019557.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity