Tan0009956 (gene) Snake gourd v1

Overview


Name	Tan0009956
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CASP-like protein
Location	LG11: 6225878 .. 6227659 (-)
RNA-Seq Expression	Tan0009956
Synteny	Tan0009956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGTCTACGTTTTTCTGTGCTATAAAAGCTAGCTCAGTCAGTTTTAATATATCAGATTGTGAAATAAAAAAGGATATCAAATTTCATTAGCATTCGGCAAAAATGGCAGCGAAAATGGGTGTAAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACTTTTGTTTTCCTTTTCATTTCCATCATAGTTCTCGCAACTAATTCCAAAACCGTAGTAGGATTTGAAGGCAAATTGCAATTCCATGATGTCAATGCCTATAGGTATTTTTTTTTATATATCTATTTTTTCTTTGATATCTGTTTTGGGTTTCATCATTTTTATTTATTTAATTAACTTTGAAGAATTTTGAAAAAAAAAAAAAAAAAATTGATCAAGGTATGCCATGGCAACCATCATCATTGGAGGTGCATTCAACCTCTTGCAAATTGCCTTAGCCCTTTATCGTCTTGTAACCAAAACTGAAGGCAATCTTTTATTCGACTTCTATGGTGATAAGGTATATCTTATGTGGCCTAACTATAGGTTTTAGTTCCTAACCATAAAATGCTTGTTTTCAACTATTGCTTAGAATCTTTTGATTTAGTCCTTTTATATGGTTTTAATGTTTTTTAATTATATCATTTCTATGTTGGTCAACATCACAATTATTTGATTTGATGATAAAATACTTAGTGATTGGTTATAATAACATGAGTTAAAATAATCTATGAGTTATTATAGTCTGTGAAATTATATAATATTATTTGAAAATACATAATTGTTTATTTTGGAGTTATAATAGTCTGCATTTGGGGTGTAGGGTATTTCACGGGTTATTGTTACAATAACATGTGCCCAAACATGCCTTAAGTATGGTTAATGTGTCTTTCAAAAATATTAGTTAAATGCTTTCTTGATCTAAAAGCAATTTGAATATTATGTTTTTTAAGTTTCTCGAACCAAACTACTTTTGATTGTTAGATTTTTTTCAAAAAAAAAAAAGTTCTTAATAGGTAAATCACTCATTTTAAAAATATATATAGACATTTTTAATCATTCACGATACTTTAAGATCTCTAATTCCTACCTCAAATTAGTAAGAAATTGACAAAAAAAAAAAAACTTTTTGTAAGTGGCCTAATTTTCCATCTAAATTTGTACTAACTCACTAAATATATATACTATATAAACTTACCATTAAGCCCAATTTCAACATGAAGGGAAATGATATAGTTGCAAAATGTTAAAATATAAAAGACCTAAATTGAAACTAATTAAACAATAGAGACTAAATTAAAAATAATTCTAAACATTAGGCACTAAAAACATATATTTAGCAGATTAATTATTTACATGAATTATGAAATTATGAGGAAGTTTTAGTTATTGAAGAGGATGAATTTGGGTGTTATAGGTATTGTCGTACGTTCTGCTGGCGGGAGCTGCGGCGGCGCTGGCCGCCGGCATTGACTTAAAGGCGAATTTCGAGTCTTTGGCATCGTTTTTCGACCATGGCAACGCCGCCTCTGCTCTTCTTCTTCTTGCCTTTTTCTGCAGTGCCGTCGTCTCTGTTCTTTCCTCTTTGGCCCTTTCTAATTCTAACACAGCTTAGTTTTCTTTTTTCTTTTTTTAGTTTTCTTCGAAAATTAATAGGACAATCTTTGTGTTTCCCTTTTTTGTGAAATTATTTGGCTTTGTCGTGTGATATCATATGAATTGTAATGTAGAATTTAGGAGTTTGGAGTTCTTGGAATTTTTTTTTGGGTAAAAGAATAAAAGTAAAGGATTTGATTTTTTTTT

mRNA sequence

AAAAAAAAGTCTACGTTTTTCTGTGCTATAAAAGCTAGCTCAGTCAGTTTTAATATATCAGATTGTGAAATAAAAAAGGATATCAAATTTCATTAGCATTCGGCAAAAATGGCAGCGAAAATGGGTGTAAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACTTTTGTTTTCCTTTTCATTTCCATCATAGTTCTCGCAACTAATTCCAAAACCGTAGTAGGATTTGAAGGCAAATTGCAATTCCATGATGTCAATGCCTATAGGTATGCCATGGCAACCATCATCATTGGAGGTGCATTCAACCTCTTGCAAATTGCCTTAGCCCTTTATCGTCTTGTAACCAAAACTGAAGGCAATCTTTTATTCGACTTCTATGGTGATAAGGTATTGTCGTACGTTCTGCTGGCGGGAGCTGCGGCGGCGCTGGCCGCCGGCATTGACTTAAAGGCGAATTTCGAGTCTTTGGCATCGTTTTTCGACCATGGCAACGCCGCCTCTGCTCTTCTTCTTCTTGCCTTTTTCTGCAGTGCCGTCGTCTCTGTTCTTTCCTCTTTGGCCCTTTCTAATTCTAACACAGCTTAGTTTTCTTTTTTCTTTTTTTAGTTTTCTTCGAAAATTAATAGGACAATCTTTGTGTTTCCCTTTTTTGTGAAATTATTTGGCTTTGTCGTGTGATATCATATGAATTGTAATGTAGAATTTAGGAGTTTGGAGTTCTTGGAATTTTTTTTTGGGTAAAAGAATAAAAGTAAAGGATTTGATTTTTTTTT

Coding sequence (CDS)

ATGGCAGCGAAAATGGGTGTAAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACTTTTGTTTTCCTTTTCATTTCCATCATAGTTCTCGCAACTAATTCCAAAACCGTAGTAGGATTTGAAGGCAAATTGCAATTCCATGATGTCAATGCCTATAGGTATGCCATGGCAACCATCATCATTGGAGGTGCATTCAACCTCTTGCAAATTGCCTTAGCCCTTTATCGTCTTGTAACCAAAACTGAAGGCAATCTTTTATTCGACTTCTATGGTGATAAGGTATTGTCGTACGTTCTGCTGGCGGGAGCTGCGGCGGCGCTGGCCGCCGGCATTGACTTAAAGGCGAATTTCGAGTCTTTGGCATCGTTTTTCGACCATGGCAACGCCGCCTCTGCTCTTCTTCTTCTTGCCTTTTTCTGCAGTGCCGTCGTCTCTGTTCTTTCCTCTTTGGCCCTTTCTAATTCTAACACAGCTTAG

Protein sequence

MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIIIGGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLASFFDHGNAASALLLLAFFCSAVVSVLSSLALSNSNTA

Homology

[Close]

BLAST of Tan0009956 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.2e-26
Identity = 72/154 (46.75%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 8   KIASFVLRVLTFVFLFISIIVLATNSKTVV--GFEGKLQFHDVNAYRYAMATIIIGGAFN 67
           ++A+ +LR+LTF+FL  S+++L TN+ T+     E K+ F DV AYRY +ATI+IG A+ 
Sbjct: 11  RMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYT 70

Query: 68  LLQIALALYRLVT-----KTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFE--- 127
           +LQIA  LY + T       +GNL FDF+GDKV+SY+L+ GAAA  A+  D+K  F    
Sbjct: 71  VLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFSGSG 130

Query: 128 SLASFFDHGNAASALLLLAFFCSAVVSVLSSLAL 152
              +F + G A+++LLL+ F C+AV+SV SS AL
Sbjct: 131 DFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of Tan0009956 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-23
Identity = 71/160 (44.38%), Postives = 101/160 (63.12%), Query Frame = 0


Query: 2   AAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTV-VGF-EGKLQFHDVNAYRYAMATII 61
           A  M  ++ +  LRVLTF FL +S++++ TN+ T+ +G  E K++  D  +YRY +A I 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIA 73

Query: 62  IGGAFNLLQIALALYRL------VTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLK 121
            G  + +LQIAL L  +       T  +GNL+FDFYGDKV+SY+L  GAAAA  A  +LK
Sbjct: 74  FGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELK 133

Query: 122 ANFESLA--SFFDHGNAASALLLLAFFCSAVVSVLSSLAL 152
                L    FF+ G A+++LLLL F C+A++SV SS AL
Sbjct: 134 TQLAGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYAL 173

[Close]

BLAST of Tan0009956 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 65/155 (41.94%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 2   AAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIIIG 61
           ++  G +    +LRVLTFVFL I++I++A   +T      +++F+D+ AYRY ++TIIIG
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIG 71

Query: 62  GAFNLLQIALALYRLVT-----KTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANF 121
            A+NLLQ+AL+++ +V+       +G  LFDF+GDK++SY+L++G+AA     ++L    
Sbjct: 72  FAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGV 131

Query: 122 ESLASFFDHGNAASALLLLAFFCSAVVSVLSSLAL 152
            S  SF D  NA+++LLL+AF  +AV S  +S AL
Sbjct: 132 PS-NSFMDKANASASLLLIAFLFTAVASTFTSFAL 165

[Close]

BLAST of Tan0009956 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 68/149 (45.64%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 11  SFVLRVLTFVFLFISIIVLATNSKTV--VGFEGKLQFHDVNAYRYAMATIIIGGAFNLLQ 70
           S ++R+LT + L IS IV+ATN++TV  V  + K++F D  AYRY +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALALYRLVTKT----EGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLK--ANFESLASF 130
           IA ++  L T      EG LLFDFYGDK +SY L+ GAAA+     DLK     ++ + F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDHGNAASALLLLAFFCSAVVSVLSSLAL 152
            +  NAA++L L+ FF +   S+ SS  L
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNL 162

[Close]

BLAST of Tan0009956 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 5   MGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFH--DVNAYRYAMATIIIGG 64
           + +K++  +LRVLT VFL I++I+L+TNS T+V     L+FH  DV AYRY ++  +IG 
Sbjct: 11  VSLKVSLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 70

Query: 65  AFNLLQIALALYRLVT--KTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 124
            + ++Q+   +    T  K   N   DFYGDK++SY++  G+AA      DLK  F +L 
Sbjct: 71  LYAVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALV 130

Query: 125 S---------FFDHGNAASALLLLAFFCSAVVSVLSSLALSNSN 156
           +         FF  G A+++LLL +F C AV+SV SSLA++  N
Sbjct: 131 ALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKRN 174

[Close]

BLAST of Tan0009956 vs. NCBI nr
Match: XP_038877615.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 9.5e-56
Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIAS VLRV+TFVFL ISIIVLATNSKT+   + K  FH+VN+YRYA+ TIII
Sbjct: 1   MEAKMGSKIASLVLRVVTFVFLLISIIVLATNSKTI--GDAKFHFHNVNSYRYAITTIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRLVTKT+GNLLFDFYGDKVLSYVLL+GAAAAL +GIDLKAN E LA
Sbjct: 61  GGAFNLLQIALALYRLVTKTDGNLLFDFYGDKVLSYVLLSGAAAALGSGIDLKANLEVLA 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSN 154
           SFFDHGNA +ALLLLAFFCSAVVSVLSSLALSN
Sbjct: 121 SFFDHGNAGAALLLLAFFCSAVVSVLSSLALSN 151

[Close]

BLAST of Tan0009956 vs. NCBI nr
Match: XP_008458887.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 6.4e-52
Identity = 120/153 (78.43%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKM  KIASFVLRVLTFVFL +SIIVL TNSKT+   E  + FH+VN+YRYAMATIII
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDE--VHFHNVNSYRYAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRLVTKT+G++LFDFYGDKVLSY LLAGAAAAL + +DLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSN 154
           SFFD GNAA+ALLLLAF CSA++SVLSSLALSN
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAIISVLSSLALSN 151

[Close]

BLAST of Tan0009956 vs. NCBI nr
Match: XP_022992769.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-51
Identity = 123/156 (78.85%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIASFVLRVLTFVFL ISIIVL T SKTV   + KLQFH+VN+YR+AMATIII
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV--GDEKLQFHNVNSYRFAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRL+TKT+G +LFDF+GDKVLSY LLAGAAAAL + IDLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSNSNT 157
           SFFD GNAA+ALLLLAF CSAVVSVLSS ALS+  T
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154

[Close]

BLAST of Tan0009956 vs. NCBI nr
Match: XP_031741109.1 (CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical protein Csa_007999 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 9.2e-51
Identity = 117/153 (76.47%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIASFVLRVL F FL ISIIVL TNSKTV   E    FH+VN+YR+AMATII+
Sbjct: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSES--HFHNVNSYRFAMATIIV 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIAL+LYRL+TKT+G++LFDFYGDK+LSYVLLAGAAAAL + IDLKAN    +
Sbjct: 61  GGAFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWS 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSN 154
           SFFD GNAA+ALLLLAF CSA++SVLSSLALSN
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAIISVLSSLALSN 151

[Close]

BLAST of Tan0009956 vs. NCBI nr
Match: XP_022939465.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 210.7 bits (535), Expect = 9.2e-51
Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIASFVLRVLTFVFL ISIIVL T SKTV   + KLQFH+VN+YR+AMATIII
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV--GDEKLQFHNVNSYRFAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRL+TK++G +LFDF+GDKVLSY LLAGAAAAL + IDLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSNSNT 157
           SFFD GNAA+ALLLLAF CSA+VSVLSS ALS+  T
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT 154

[Close]

BLAST of Tan0009956 vs. ExPASy TrEMBL
Match: A0A1S3C911 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.1e-52
Identity = 120/153 (78.43%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKM  KIASFVLRVLTFVFL +SIIVL TNSKT+   E  + FH+VN+YRYAMATIII
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDE--VHFHNVNSYRYAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRLVTKT+G++LFDFYGDKVLSY LLAGAAAAL + +DLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSN 154
           SFFD GNAA+ALLLLAF CSA++SVLSSLALSN
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAIISVLSSLALSN 151

[Close]

BLAST of Tan0009956 vs. ExPASy TrEMBL
Match: A0A6J1JYE7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 123/156 (78.85%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIASFVLRVLTFVFL ISIIVL T SKTV   + KLQFH+VN+YR+AMATIII
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV--GDEKLQFHNVNSYRFAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRL+TKT+G +LFDF+GDKVLSY LLAGAAAAL + IDLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSNSNT 157
           SFFD GNAA+ALLLLAF CSAVVSVLSS ALS+  T
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154

[Close]

BLAST of Tan0009956 vs. ExPASy TrEMBL
Match: A0A6J1FMS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.5e-51
Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MAAKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIII 60
           M AKMG KIASFVLRVLTFVFL ISIIVL T SKTV   + KLQFH+VN+YR+AMATIII
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV--GDEKLQFHNVNSYRFAMATIII 60

Query: 61  GGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 120
           GGAFNLLQIALALYRL+TK++G +LFDF+GDKVLSY LLAGAAAAL + IDLKAN + L 
Sbjct: 61  GGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 120

Query: 121 SFFDHGNAASALLLLAFFCSAVVSVLSSLALSNSNT 157
           SFFD GNAA+ALLLLAF CSA+VSVLSS ALS+  T
Sbjct: 121 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT 154

[Close]

BLAST of Tan0009956 vs. ExPASy TrEMBL
Match: A0A6J1BZ60 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.3e-46
Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 5   MGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFHDVNAYRYAMATIIIGGAF 64
           MG KIAS VLRV+TFVFLFISIIVLATNS      +G + FH+VN+YR+AMATIIIGGAF
Sbjct: 7   MGSKIASLVLRVVTFVFLFISIIVLATNS------QGNIHFHNVNSYRFAMATIIIGGAF 66

Query: 65  NLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLASFFD 124
           NLLQIAL+LY +++K+ GNLLF FYGDKVLSYVLL+GAAA L  GIDL AN E + SFF 
Sbjct: 67  NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG 126

Query: 125 HGNAASALLLLAFFCSAVVSVLSSLALSN 154
            GNAA+ALLL+AF CSA +S+LSSLALSN
Sbjct: 127 KGNAAAALLLIAFLCSAAISILSSLALSN 149

[Close]

BLAST of Tan0009956 vs. ExPASy TrEMBL
Match: A0A0A0KS88 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 88/158 (55.70%), Postives = 119/158 (75.32%), Query Frame = 0


Query: 3   AKMGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGF---EGKLQFHDVNAYRYAMATII 62
           A  G++IAS +LR+LTF+F+FIS++++ATN+KTV  +   E K++F DVN+YRY +A  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGGAFNLLQIALALYRLVTKTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESL 122
           IGGA  LLQIA  +Y LVTK EG  LF  + D++L+Y+LL+ A+A L +GIDL+AN + L
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 ------ASFFDHGNAASALLLLAFFCSAVVSVLSSLAL 152
                 +SFFD GNA SA+L LAF CSA+VSVLSSLAL
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLAL 159

[Close]

BLAST of Tan0009956 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 5   MGVKIASFVLRVLTFVFLFISIIVLATNSKTVVGFEGKLQFH--DVNAYRYAMATIIIGG 64
           + +K+   +LRVLT VFL I++I+L+TNS T+V     L+FH  DV AYRY ++  +IG 
Sbjct: 11  VSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 70

Query: 65  AFNLLQIALALYRLVT--KTEGNLLFDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA 124
            + ++Q+   +    T  K   N   DFYGDK++SY++  G+AA      DLK  F +L 
Sbjct: 71  VYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALV 130

Query: 125 S---------FFDHGNAASALLLLAFFCSAVVSVLSSLALSNSN 156
           +         FF  G A+++LLL AF C AV+SV SS A++  N
Sbjct: 131 ALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKRN 174

[Close]

BLAST of Tan0009956 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 13  VLRVLTFVFLFISIIVLATNSKT--VVGFEGKLQFHDVNAYRYAMATIIIGGAFNLLQIA 72
           +LRVLT  FL I++++++TN+ T  +     KL F+DV AYRY ++  +IG  + ++Q+ 
Sbjct: 19  LLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLF 78

Query: 73  LALYRLVTKTEGNLL--FDFYGDKVLSYVLLAGAAAALAAGIDLKANFESLA-------- 132
           L + +  T     L   FDFYGDKV+SY+L  G+AA      DLK  + +L         
Sbjct: 79  LTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPV 138

Query: 133 -SFFDHGNAASALLLLAFFCSAVVSVLSSLALS 153
             FF  G A+++LLL AF   AV+SV SSLALS
Sbjct: 139 DKFFSKGYASASLLLFAFVSLAVLSVFSSLALS 171

The following BLAST results are available for this feature:

BLAST of Tan0009956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	6.2e-26	46.75	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	1.7e-23	44.38	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
C6T1Z6	1.9e-22	41.94	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A1XGB4	3.5e-21	45.64	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
D7LD59	1.0e-20	40.24	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Tan0009956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877615.1	9.5e-56	83.66	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_008458887.1	6.4e-52	78.43	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_022992769.1	2.4e-51	78.85	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_031741109.1	9.2e-51	76.47	CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical pr...	[more]
XP_022939465.1	9.2e-51	77.56	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of Tan0009956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C911	3.1e-52	78.43	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
A0A6J1JYE7	1.2e-51	78.85	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1	[more]
A0A6J1FMS6	4.5e-51	77.56	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1	[more]
A0A6J1BZ60	3.3e-46	72.48	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1	[more]
A0A0A0KS88	1.3e-34	55.70	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1	[more]

BLAST of Tan0009956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.6e-21	40.24	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.2e-18	41.18	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..139 e-value: 1.2E-22 score: 80.3
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..154
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 7..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009956.1	Tan0009956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding