MS007778 (gene) Bitter gourd (TR) v1

Overview
NameMS007778
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyltransferase family 92 protein
Locationscaffold13: 1192769 .. 1192894 (-)
RNA-Seq ExpressionMS007778
SyntenyMS007778
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGGCTTAAGGAAGGGTGGCGAGAGAGCTGATGATCACTGGTTGGTTAGGAATAGGCAAATAGTTGCCTCACGGGAGATTTTGATATACGAGACAACTATTGACGGTGATACGTGTTGTGTTTTC

mRNA sequence

ATTGGCTTAAGGAAGGGTGGCGAGAGAGCTGATGATCACTGGTTGGTTAGGAATAGGCAAATAGTTGCCTCACGGGAGATTTTGATATACGAGACAACTATTGACGGTGATACGTGTTGTGTTTTC

Coding sequence (CDS)

ATTGGCTTAAGGAAGGGTGGCGAGAGAGCTGATGATCACTGGTTGGTTAGGAATAGGCAAATAGTTGCCTCACGGGAGATTTTGATATACGAGACAACTATTGACGGTGATACGTGTTGTGTTTTC

Protein sequence

IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF
Homology
[Close]
BLAST of MS007778 vs. NCBI nr
Match: XP_022151121.1 (glycosyltransferase family 92 protein RCOM_0530710 [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-06
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LR+G E  DDHWLVRNRQ +AS E L+YE  IDGDT  VF
Sbjct: 162 VDLRRGSEGVDDHWLVRNRQPIASWERLVYEAAIDGDTVIVF 203

[Close]
BLAST of MS007778 vs. NCBI nr
Match: KAG7030815.1 (Glycosyltransferase family 92 protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 59.3 bits (142), Expect = 9.2e-06
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LRK G  ADDHWLVRNRQ VAS E ++YE  IDGDT  VF
Sbjct: 162 VDLRKRGVGADDHWLVRNRQPVASWERVVYEAAIDGDTVVVF 203

[Close]
BLAST of MS007778 vs. NCBI nr
Match: KAG6600148.1 (Glycosyltransferase family 92 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.3 bits (142), Expect = 9.2e-06
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LRK G  ADDHWLVRNRQ VAS E ++YE  IDGDT  VF
Sbjct: 162 VDLRKRGVGADDHWLVRNRQPVASWERVVYEAAIDGDTVVVF 203

[Close]
BLAST of MS007778 vs. NCBI nr
Match: XP_022943144.1 (glycosyltransferase family 92 protein RCOM_0530710-like [Cucurbita moschata])

HSP 1 Score: 59.3 bits (142), Expect = 9.2e-06
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LRK G  ADDHWLVRNRQ VAS E ++YE  IDGDT  VF
Sbjct: 162 VDLRKRGVGADDHWLVRNRQPVASWERVVYEAAIDGDTVVVF 203

[Close]
BLAST of MS007778 vs. NCBI nr
Match: XP_023512237.1 (glycosyltransferase family 92 protein RCOM_0530710-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LRK G  ADDHWLVRNRQ V+S E ++YE  IDGDT  VF
Sbjct: 162 VDLRKRGVGADDHWLVRNRQPVSSWERVVYEAAIDGDTVVVF 203

[Close]
BLAST of MS007778 vs. ExPASy TrEMBL
Match: A0A6J1DDM0 (Glycosyltransferase family 92 protein OS=Momordica charantia OX=3673 GN=LOC111019126 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LR+G E  DDHWLVRNRQ +AS E L+YE  IDGDT  VF
Sbjct: 162 VDLRRGSEGVDDHWLVRNRQPIASWERLVYEAAIDGDTVIVF 203

[Close]
BLAST of MS007778 vs. ExPASy TrEMBL
Match: A0A6J1FTF0 (Glycosyltransferase family 92 protein OS=Cucurbita moschata OX=3662 GN=LOC111447962 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-06
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LRK G  ADDHWLVRNRQ VAS E ++YE  IDGDT  VF
Sbjct: 162 VDLRKRGVGADDHWLVRNRQPVASWERVVYEAAIDGDTVVVF 203

[Close]
BLAST of MS007778 vs. ExPASy TrEMBL
Match: A0A5A7SV42 (Glycosyltransferase family 92 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00600 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LR+GG  ADDHWLVRNR  VAS E ++YE  IDG+T  VF
Sbjct: 162 VDLRRGGVEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVF 203

[Close]
BLAST of MS007778 vs. ExPASy TrEMBL
Match: A0A0A0KTU0 (Glycosyltransferase family 92 protein OS=Cucumis sativus OX=3659 GN=Csa_5G603970 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LR+GG  ADDHWLVRNR  VAS E ++YE  IDG+T  VF
Sbjct: 162 VDLRRGGVEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVF 203

[Close]
BLAST of MS007778 vs. ExPASy TrEMBL
Match: A0A1S3BFI1 (Glycosyltransferase family 92 protein OS=Cucumis melo OX=3656 GN=LOC103489054 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1   IGLRKGGERADDHWLVRNRQIVASREILIYETTIDGDTCCVF 43
           + LR+GG  ADDHWLVRNR  VAS E ++YE  IDG+T  VF
Sbjct: 162 VDLRRGGVEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVF 203

The following BLAST results are available for this feature:
BLAST of MS007778 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151121.13.1e-0664.29glycosyltransferase family 92 protein RCOM_0530710 [Momordica charantia][more]
KAG7030815.19.2e-0666.67Glycosyltransferase family 92 protein, partial [Cucurbita argyrosperma subsp. ar... [more]
KAG6600148.19.2e-0666.67Glycosyltransferase family 92 protein, partial [Cucurbita argyrosperma subsp. so... [more]
XP_022943144.19.2e-0666.67glycosyltransferase family 92 protein RCOM_0530710-like [Cucurbita moschata][more]
XP_023512237.12.0e-0564.29glycosyltransferase family 92 protein RCOM_0530710-like [Cucurbita pepo subsp. p... [more]
BLAST of MS007778 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS007778 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DDM01.5e-0664.29Glycosyltransferase family 92 protein OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1FTF04.4e-0666.67Glycosyltransferase family 92 protein OS=Cucurbita moschata OX=3662 GN=LOC111447... [more]
A0A5A7SV429.9e-0661.90Glycosyltransferase family 92 protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A0A0KTU09.9e-0661.90Glycosyltransferase family 92 protein OS=Cucumis sativus OX=3659 GN=Csa_5G603970... [more]
A0A1S3BFI19.9e-0661.90Glycosyltransferase family 92 protein OS=Cucumis melo OX=3656 GN=LOC103489054 PE... [more]
BLAST of MS007778 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007778.1MS007778.1mRNA