MS007650.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS007650.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVitamin K-dependent protein S-like
Locationscaffold13: 168269 .. 170493 (+)
Sequence length807
RNA-Seq ExpressionMS007650.1
SyntenyMS007650.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAGAGCAAAAAACCCCCAACTTCCAACTTCCAACTACCCACGCCGTCCCCTATTAAAACCCCCAACCGCGCAGGGCTTAGGATTTTTCAAGAGAAAGCGTCGAAACTTTTTCAATCTCTCTGATTTCTGTTCATTGGTGGGCTCTATGGCTTCCATTTCTGCTCTGGCTCTGCTGCTTATCTTTCAATCTGCGATTGCAAACGCTGATGATTTGAGAGACCTGCTGTCTCCTCTTCTCTCGCCCATTTTCGGTTGGTTGTTCTTCCCCTTTTTGTTTTCTGCGATTTTCGTGGCTGTTCTTTGATGGGTTTCTTGAGATTTTCCCGTTGATTTTGTGGGTTTTGCTGAAGTGGGTCGCTAAGAACAGGGGTTTTTGTTGTTTTGATTGGGTTTGAAATTGCAGAAAATGTCTGTAAAGAAGTAGAATGTGGAAAAGGAACTTGTAAAGCTTCTGGTAATGGGACTTTCTCGTTTGAATGTGATTGTGATCCTGGGTGGAAGAAGACTCTTTTGGATGATGATGATGATGATCACGCCAAGTTTCTCCCCTGCATTATACCCAAATGTCGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCTCTCTCTCTCTCTACTTTGAAGCTCCTCTGAAAAATAGCTCTGTTTTTAGCTATAATGGTTTCGTAGCTGGCTGCTAATTTTAGCTGTTTGATTCTGCAAAATAGGACTTGTTTTTTGTTTGATGAAGGTATTTGCTAAAATTTGTGGCAGAGGTGGCTGATAAGATGTATATTTAGAGTGTACTGTGTTGCATGTGGAAAAATGAGATTCGAATACTTAGTTTTATGACTACTGTACATTTAATTTCTATTCTTCTGGTCCTGTTTTAAGATTTCATATTGTGTTGAGAAGAAATCGACTACCCGTTTCAAACTCTATGTTAAATTTGATGCATGTAGCTTAGAACATAAGTTTATATGATGTTGAATAAGATTTGTGTCAAGTGGAATATGGAAAATTTAAGGATAAATTTGGGTAAAAAGATATGAAACATTTGTGAATAAAATCATGAAATGAGAGAGTTTTTAGCATAGCTCAAGCATAGCCAATGCTTAACCATAAGGTTGGAGCTAAGAGCTAAGATGTTGCTCAAAACTCAAAACTCGAAACTCGAAATTTAAACTCGAAAAGTTGATGAAAGAATGGCAGATTTATGAAGACAGAGAAGCAAGTTAAGGCCTTGTTGGGTTTAACTTAGATGGGGTATAATGAGTAAGAAGTAGAGAAGATAGATTTGGATTGGAAACACGGATTTTCATCTTTGAAGGTTCTCAGGGTCTTGGATCTCAAATGTTAGTGTTGATAAATCTTATCACTTCACTACTTTGAATGATGCTGATGGGCATTGGAATTTAACTGTTGATGCCAGGTAATCTAACTCACTCGTGCTCGTCAGCCCCTCCTCCGGGTGTACAGAAGAAACCAAGAACTAAAGACTCGATATTCGATCGTAATGACCGCTCCTATCGCTTGTCCTTGTTGCCTTGCTTGTTTTGGTGAATAAACCTATTTATGCACATAGCTTTCAATGTCTATCTTGTTGTATAGCTTGCAGTTGGGTGGACTGTGGAGGCGGTTCGTGCAACAAAACATCGCCGTTGATATACAAATGCACTTGTCTCGAGGGGTACTATAATCTTCTCAATATCACTGCCTTCCCATGCTACAAGGATTGTAAGCCCATATCATACTCGCCAAGCTGATAATTAAGTGGCAGTATAACGATGCACCGATCGAGTTGCTCGTTGCTAATCTTACTTGTGTTTGTTAATGAATCTGAAGGTTCAATAGGAATGGATTGCAAGGAACTGGGAATTCCAGTGACAAACGGACCTGATTCTACAACTCCCAGTTCAGCTACAATTGACAACAACAATGGTTAGTCAGTTCAATTTCAACAACTAACTTCTTTATCTGGTTGAACCTTCTGTTTTTCCCATAACACTCAGATTTAACCTCTTCATAAACAGAACGACAAAAAAAACGAGTTTCTGCCACCGTGACGTTTTTTAGCATTCAACTATCTATCATATATGTATTTAGAATTGCATTGACAGTCATTCAAACTATTCTGTTTTACAGCTGCTGGCAGATTAGTTATCAAGCGAGGCTCCCTCTCGATGATCGGTTCGGTGGTAACGTATGTCGCTATGCTGCTGCTGATCAAA

mRNA sequence

GAAAAAAGAGCAAAAAACCCCCAACTTCCAACTTCCAACTACCCACGCCGTCCCCTATTAAAACCCCCAACCGCGCAGGGCTTAGGATTTTTCAAGAGAAAGCGTCGAAACTTTTTCAATCTCTCTGATTTCTGTTCATTGGTGGGCTCTATGGCTTCCATTTCTGCTCTGGCTCTGCTGCTTATCTTTCAATCTGCGATTGCAAACGCTGATGATTTGAGAGACCTGCTGTCTCCTCTTCTCTCGCCCATTTTCGAAAATGTCTGTAAAGAAGTAGAATGTGGAAAAGGAACTTGTAAAGCTTCTGGTAATGGGACTTTCTCGTTTGAATGTGATTGTGATCCTGGGTGGAAGAAGACTCTTTTGGATGATGATGATGATGATCACGCCAAGTTTCTCCCCTGCATTATACCCAAATGTAATCTAACTCACTCGTGCTCGTCAGCCCCTCCTCCGGGTGTACAGAAGAAACCAAGAACTAAAGACTCGATATTCGATCCTTGCAGTTGGGTGGACTGTGGAGGCGGTTCGTGCAACAAAACATCGCCGTTGATATACAAATGCACTTGTCTCGAGGGGTACTATAATCTTCTCAATATCACTGCCTTCCCATGCTACAAGGATTGTTCAATAGGAATGGATTGCAAGGAACTGGGAATTCCAGTGACAAACGGACCTGATTCTACAACTCCCAGTTCAGCTACAATTGACAACAACAATGCTGCTGGCAGATTAGTTATCAAGCGAGGCTCCCTCTCGATGATCGGTTCGGTGGTAACGTATGTCGCTATGCTGCTGCTGATCAAA

Coding sequence (CDS)

GAAAAAAGAGCAAAAAACCCCCAACTTCCAACTTCCAACTACCCACGCCGTCCCCTATTAAAACCCCCAACCGCGCAGGGCTTAGGATTTTTCAAGAGAAAGCGTCGAAACTTTTTCAATCTCTCTGATTTCTGTTCATTGGTGGGCTCTATGGCTTCCATTTCTGCTCTGGCTCTGCTGCTTATCTTTCAATCTGCGATTGCAAACGCTGATGATTTGAGAGACCTGCTGTCTCCTCTTCTCTCGCCCATTTTCGAAAATGTCTGTAAAGAAGTAGAATGTGGAAAAGGAACTTGTAAAGCTTCTGGTAATGGGACTTTCTCGTTTGAATGTGATTGTGATCCTGGGTGGAAGAAGACTCTTTTGGATGATGATGATGATGATCACGCCAAGTTTCTCCCCTGCATTATACCCAAATGTAATCTAACTCACTCGTGCTCGTCAGCCCCTCCTCCGGGTGTACAGAAGAAACCAAGAACTAAAGACTCGATATTCGATCCTTGCAGTTGGGTGGACTGTGGAGGCGGTTCGTGCAACAAAACATCGCCGTTGATATACAAATGCACTTGTCTCGAGGGGTACTATAATCTTCTCAATATCACTGCCTTCCCATGCTACAAGGATTGTTCAATAGGAATGGATTGCAAGGAACTGGGAATTCCAGTGACAAACGGACCTGATTCTACAACTCCCAGTTCAGCTACAATTGACAACAACAATGCTGCTGGCAGATTAGTTATCAAGCGAGGCTCCCTCTCGATGATCGGTTCGGTGGTAACGTATGTCGCTATGCTGCTGCTGATCAAA

Protein sequence

EKRAKNPQLPTSNYPRRPLLKPPTAQGLGFFKRKRRNFFNLSDFCSLVGSMASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFECDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLIK
Homology
BLAST of MS007650.1 vs. NCBI nr
Match: XP_022138365.1 (protein jagged-1 [Momordica charantia])

HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0

Query: 51  MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE 110
           MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE
Sbjct: 1   MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE 60

Query: 111 CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW 170
           CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW
Sbjct: 61  CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW 120

Query: 171 VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT 230
           VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT
Sbjct: 121 VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT 180

Query: 231 PSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLIK 270
           PSSATIDNNNAAG LVIKRGSLSMIGSVVTYVAMLLLIK
Sbjct: 181 PSSATIDNNNAAGGLVIKRGSLSMIGSVVTYVAMLLLIK 219

BLAST of MS007650.1 vs. NCBI nr
Match: XP_008449322.1 (PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 5.0e-97
Identity = 191/271 (70.48%), Postives = 207/271 (76.38%), Query Frame = 0

Query: 2   KRAKNPQLPTSNYPRRPLLKPPTAQGLGFFKRKRRNF-FNLSDFCSLVGSMASI-SALAL 61
           K++K+ QLPT+      + K P   G   +     N    +S FC     MASI  ALAL
Sbjct: 2   KKSKSSQLPTT----FAVSKTPNWVGFCLYHEAFSNIHMAISLFCDRWRVMASIVVALAL 61

Query: 62  LLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFECDCDPGWKK 121
           LL+FQS  A ADD  DLLSPLLSPIFENVCKEV CGKGTCK SGNG+FSFECDC+ GWK+
Sbjct: 62  LLVFQS--AKADDFNDLLSPLLSPIFENVCKEVNCGKGTCKTSGNGSFSFECDCESGWKQ 121

Query: 122 TLLDDDDDD--HAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSWVDCGGGS 181
           TL DDDDDD  H KFLPCIIPKCNLTHSCSSAPPPGVQ KPR   +I DPCSWVDCGGG 
Sbjct: 122 TLFDDDDDDRNHFKFLPCIIPKCNLTHSCSSAPPPGVQTKPRINGTILDPCSWVDCGGGL 181

Query: 182 CNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTTPSSATID 241
           CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTN P STT +S T  
Sbjct: 182 CNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPASTTSTSTT-- 241

Query: 242 NNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           NNNAA RL +KRGSLS I SVV Y+A LLL+
Sbjct: 242 NNNAASRLFLKRGSLSTISSVVMYIATLLLL 264

BLAST of MS007650.1 vs. NCBI nr
Match: TYK30143.1 (vitamin K-dependent protein S-like [Cucumis melo var. makuwa])

HSP 1 Score: 362.1 bits (928), Expect = 4.2e-96
Identity = 181/231 (78.35%), Postives = 191/231 (82.68%), Query Frame = 0

Query: 41  LSDFCSLVGSMASI-SALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTC 100
           +S FC     MASI  ALALLL+FQS  A ADD  DLLSPLLSPIFENVCKEV CGKGTC
Sbjct: 3   ISLFCDRWRVMASIVVALALLLVFQS--AKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 62

Query: 101 KASGNGTFSFECDCDPGWKKTLLDDDDDD--HAKFLPCIIPKCNLTHSCSSAPPPGVQKK 160
           K SGNG+FSFECDC+ GWK+TL DDDDDD  H KFLPCIIPKCNLTHSCSSAPPPGVQ K
Sbjct: 63  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLTHSCSSAPPPGVQTK 122

Query: 161 PRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKE 220
           PR   +I DPCSWVDCGGG CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDCKE
Sbjct: 123 PRINGTILDPCSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKE 182

Query: 221 LGIPVTNGPDSTTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           LGIPVTN P STT +S T  NNNAA RL +KRGSLS I SVV Y+A LLL+
Sbjct: 183 LGIPVTNSPASTTSTSTT--NNNAASRLFLKRGSLSTISSVVMYIATLLLL 229

BLAST of MS007650.1 vs. NCBI nr
Match: XP_004145389.1 (neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypothetical protein Csa_006025 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-95
Identity = 181/233 (77.68%), Postives = 193/233 (82.83%), Query Frame = 0

Query: 41  LSDFCSLVGSMASI-SALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTC 100
           +S FC     MASI  AL LLL+FQS  A ADDL DLLSPLLSPIFENVCKEV CGKGTC
Sbjct: 3   ISLFCDRWRVMASIVLALPLLLVFQS--AKADDLNDLLSPLLSPIFENVCKEVNCGKGTC 62

Query: 101 KASGNGTFSFECDCDPGWKKTLLDDDDDD----HAKFLPCIIPKCNLTHSCSSAPPPGVQ 160
           K SGNG+FSFECDCD GWK+TL DDDD D    H KFLPCIIPKCNLTHSCSSAPPPGVQ
Sbjct: 63  KTSGNGSFSFECDCDSGWKQTLFDDDDTDDDSNHFKFLPCIIPKCNLTHSCSSAPPPGVQ 122

Query: 161 KKPRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDC 220
            KPRT ++I DPCSWVDCGGG CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDC
Sbjct: 123 TKPRTNETILDPCSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDC 182

Query: 221 KELGIPVTNGPDSTTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           KELGIPVTN P STT S++T +NNNAA  L +K+GSLS I SVV YVA LLL+
Sbjct: 183 KELGIPVTNSPASTT-STSTTNNNNAASGLFLKQGSLSTISSVVMYVATLLLL 232

BLAST of MS007650.1 vs. NCBI nr
Match: XP_038906891.1 (uncharacterized protein LOC120092768 [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 8.8e-94
Identity = 174/220 (79.09%), Postives = 191/220 (86.82%), Query Frame = 0

Query: 50  SMASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSF 109
           +MASI+AL+LLLIFQSA AN  D  DLLSPLLSPIFENVCKEV CGKGTCKASGNGTFSF
Sbjct: 12  AMASIAALSLLLIFQSAKAN--DFNDLLSPLLSPIFENVCKEVNCGKGTCKASGNGTFSF 71

Query: 110 ECDCDPGWKKTLLDDDDD-DHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPC 169
           ECDCD GWK++L DDDDD  H KFLPCIIPKCNLTHSCSSAP PGVQ KPRT +SIFDPC
Sbjct: 72  ECDCDSGWKQSLSDDDDDGSHFKFLPCIIPKCNLTHSCSSAPTPGVQTKPRTNESIFDPC 131

Query: 170 SWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDS 229
           SWVDCGGG CNKTSPL YKC CLEGYYNLL+ITAFPCYK+CSIGMDC+ELGIPVTN   +
Sbjct: 132 SWVDCGGGLCNKTSPLTYKCDCLEGYYNLLDITAFPCYKECSIGMDCQELGIPVTNS-TA 191

Query: 230 TTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           +TPS++T +NNNAA  L +KRGSLS I SVV Y + LLL+
Sbjct: 192 STPSTSTTNNNNAASGLFLKRGSLSTISSVVMYGSTLLLL 228

BLAST of MS007650.1 vs. ExPASy Swiss-Prot
Match: P78504 (Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 44/156 (28.21%), Postives = 56/156 (35.90%), Query Frame = 0

Query: 89  CKEVECGKGTCKASGNGTFSFECDCDPGWKKTLLDDDDDDHAKFLP---CIIPKCNLTHS 148
           C    C +G     G+     +C C  GW+    D       K +P   C+   CN    
Sbjct: 229 CNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD-------KCIPHPGCVHGICNEPWQ 288

Query: 149 CSSAPPPGVQ--KKPRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYN-LLNITA 208
           C      G Q   K         PC      GG+C+ T P  Y+C+C EGY      I  
Sbjct: 289 CLCETNWGGQLCDKDLNYCGTHQPC----LNGGTCSNTGPDKYQCSCPEGYSGPNCEIAE 348

Query: 209 FPCYKD-CSIGMDCKE--LGIPVTNGPDSTTPSSAT 236
             C  D C     CKE  LG      P  T P+ +T
Sbjct: 349 HACLSDPCHNRGSCKETSLGFECECSPGWTGPTCST 373

BLAST of MS007650.1 vs. ExPASy TrEMBL
Match: A0A6J1C997 (protein jagged-1 OS=Momordica charantia OX=3673 GN=LOC111009558 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.2e-124
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0

Query: 51  MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE 110
           MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE
Sbjct: 1   MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE 60

Query: 111 CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW 170
           CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW
Sbjct: 61  CDCDPGWKKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSW 120

Query: 171 VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT 230
           VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT
Sbjct: 121 VDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTT 180

Query: 231 PSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLIK 270
           PSSATIDNNNAAG LVIKRGSLSMIGSVVTYVAMLLLIK
Sbjct: 181 PSSATIDNNNAAGGLVIKRGSLSMIGSVVTYVAMLLLIK 219

BLAST of MS007650.1 vs. ExPASy TrEMBL
Match: A0A1S3BLS9 (uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.4e-97
Identity = 191/271 (70.48%), Postives = 207/271 (76.38%), Query Frame = 0

Query: 2   KRAKNPQLPTSNYPRRPLLKPPTAQGLGFFKRKRRNF-FNLSDFCSLVGSMASI-SALAL 61
           K++K+ QLPT+      + K P   G   +     N    +S FC     MASI  ALAL
Sbjct: 2   KKSKSSQLPTT----FAVSKTPNWVGFCLYHEAFSNIHMAISLFCDRWRVMASIVVALAL 61

Query: 62  LLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFECDCDPGWKK 121
           LL+FQS  A ADD  DLLSPLLSPIFENVCKEV CGKGTCK SGNG+FSFECDC+ GWK+
Sbjct: 62  LLVFQS--AKADDFNDLLSPLLSPIFENVCKEVNCGKGTCKTSGNGSFSFECDCESGWKQ 121

Query: 122 TLLDDDDDD--HAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPCSWVDCGGGS 181
           TL DDDDDD  H KFLPCIIPKCNLTHSCSSAPPPGVQ KPR   +I DPCSWVDCGGG 
Sbjct: 122 TLFDDDDDDRNHFKFLPCIIPKCNLTHSCSSAPPPGVQTKPRINGTILDPCSWVDCGGGL 181

Query: 182 CNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTTPSSATID 241
           CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTN P STT +S T  
Sbjct: 182 CNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPASTTSTSTT-- 241

Query: 242 NNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           NNNAA RL +KRGSLS I SVV Y+A LLL+
Sbjct: 242 NNNAASRLFLKRGSLSTISSVVMYIATLLLL 264

BLAST of MS007650.1 vs. ExPASy TrEMBL
Match: A0A5D3E219 (Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001270 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.0e-96
Identity = 181/231 (78.35%), Postives = 191/231 (82.68%), Query Frame = 0

Query: 41  LSDFCSLVGSMASI-SALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTC 100
           +S FC     MASI  ALALLL+FQS  A ADD  DLLSPLLSPIFENVCKEV CGKGTC
Sbjct: 3   ISLFCDRWRVMASIVVALALLLVFQS--AKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 62

Query: 101 KASGNGTFSFECDCDPGWKKTLLDDDDDD--HAKFLPCIIPKCNLTHSCSSAPPPGVQKK 160
           K SGNG+FSFECDC+ GWK+TL DDDDDD  H KFLPCIIPKCNLTHSCSSAPPPGVQ K
Sbjct: 63  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLTHSCSSAPPPGVQTK 122

Query: 161 PRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKE 220
           PR   +I DPCSWVDCGGG CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDCKE
Sbjct: 123 PRINGTILDPCSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKE 182

Query: 221 LGIPVTNGPDSTTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           LGIPVTN P STT +S T  NNNAA RL +KRGSLS I SVV Y+A LLL+
Sbjct: 183 LGIPVTNSPASTTSTSTT--NNNAASRLFLKRGSLSTISSVVMYIATLLLL 229

BLAST of MS007650.1 vs. ExPASy TrEMBL
Match: A0A0A0LKT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 6.0e-96
Identity = 181/233 (77.68%), Postives = 193/233 (82.83%), Query Frame = 0

Query: 41  LSDFCSLVGSMASI-SALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTC 100
           +S FC     MASI  AL LLL+FQS  A ADDL DLLSPLLSPIFENVCKEV CGKGTC
Sbjct: 3   ISLFCDRWRVMASIVLALPLLLVFQS--AKADDLNDLLSPLLSPIFENVCKEVNCGKGTC 62

Query: 101 KASGNGTFSFECDCDPGWKKTLLDDDDDD----HAKFLPCIIPKCNLTHSCSSAPPPGVQ 160
           K SGNG+FSFECDCD GWK+TL DDDD D    H KFLPCIIPKCNLTHSCSSAPPPGVQ
Sbjct: 63  KTSGNGSFSFECDCDSGWKQTLFDDDDTDDDSNHFKFLPCIIPKCNLTHSCSSAPPPGVQ 122

Query: 161 KKPRTKDSIFDPCSWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDC 220
            KPRT ++I DPCSWVDCGGG CNKTSPL YKC CLEGYYNLLNITAFPCYKDCSIGMDC
Sbjct: 123 TKPRTNETILDPCSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDC 182

Query: 221 KELGIPVTNGPDSTTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
           KELGIPVTN P STT S++T +NNNAA  L +K+GSLS I SVV YVA LLL+
Sbjct: 183 KELGIPVTNSPASTT-STSTTNNNNAASGLFLKQGSLSTISSVVMYVATLLLL 232

BLAST of MS007650.1 vs. ExPASy TrEMBL
Match: A0A6J1KDY4 (uncharacterized protein LOC111494787 OS=Cucurbita maxima OX=3661 GN=LOC111494787 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.9e-90
Identity = 168/220 (76.36%), Postives = 181/220 (82.27%), Query Frame = 0

Query: 51  MASISALALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFE 110
           MA+I+ LALLLI QSA AN  +L DLLSPLLSPIFENVCK+V CGKG+CK S N TFSFE
Sbjct: 1   MAAIAVLALLLILQSAAAN--ELNDLLSPLLSPIFENVCKQVNCGKGSCKPSDNDTFSFE 60

Query: 111 CDCDPGWKKTLLDDDDDD--HAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSIFDPC 170
           CDCD GWKK+L DDDDDD  H KFLPCIIP C LTHSCSSAPPPG+Q KPRT D IFDPC
Sbjct: 61  CDCDSGWKKSLSDDDDDDDGHFKFLPCIIPNCTLTHSCSSAPPPGIQTKPRTNDLIFDPC 120

Query: 171 SWVDCGGGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDS 230
           SWVDCGGGSCNKTSP  YKC CL  YYNLLNITAFPCYKDCSIGMDCKELGIPV + P  
Sbjct: 121 SWVDCGGGSCNKTSPFTYKCDCLADYYNLLNITAFPCYKDCSIGMDCKELGIPVASSP-- 180

Query: 231 TTPSSATIDNNNAAGRLVIKRGSLSMIGSVVTYVAMLLLI 269
             P++A   NNNAA  L++KRGSLSMI SVVT VA LLL+
Sbjct: 181 --PATARSTNNNAASGLLLKRGSLSMISSVVTCVATLLLL 214

BLAST of MS007650.1 vs. TAIR 10
Match: AT4G14746.1 (CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 8.9e-52
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 0

Query: 58  ALLLIFQSAIANADDLRDLLSPLLSPIFENVCKEVECGKGTCKASGNGTFSFECDCDPGW 117
           ALLLI Q    +     D LSPL +P+++N+CKEVECGKG CKA  N TF +EC+C+ GW
Sbjct: 13  ALLLINQKTATS-----DFLSPLFAPVYDNICKEVECGKGKCKAPSNTTFMYECECEDGW 72

Query: 118 KKTLLDDDDDDHAKFLPCIIPKCNLTHSCSSAPPPGVQKKPRTKDSI---FDPCSWVDCG 177
           K+       D H KFLPCI P C    +C  A  P  Q KP  KD+I   FDPC W+DCG
Sbjct: 73  KQF------DQHLKFLPCITPNCTFDLTCGEAASP-AQPKPPPKDNITSFFDPCQWMDCG 132

Query: 178 GGSCNKTSPLIYKCTCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNGPDSTTPS 233
           GG CN + P  Y C C EGY NL+NIT FPC K C++GMDC  LGIP++N   S+ P+
Sbjct: 133 GGLCNSSMPFQYSCNCREGYSNLMNITTFPCLKQCALGMDCLNLGIPLSNSSSSSPPA 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022138365.11.1e-12399.54protein jagged-1 [Momordica charantia][more]
XP_008449322.15.0e-9770.48PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo][more]
TYK30143.14.2e-9678.35vitamin K-dependent protein S-like [Cucumis melo var. makuwa][more]
XP_004145389.11.2e-9577.68neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypotheti... [more]
XP_038906891.18.8e-9479.09uncharacterized protein LOC120092768 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
P785041.8e-0428.21Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A6J1C9975.2e-12499.54protein jagged-1 OS=Momordica charantia OX=3673 GN=LOC111009558 PE=4 SV=1[more]
A0A1S3BLS92.4e-9770.48uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=... [more]
A0A5D3E2192.0e-9678.35Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0LKT46.0e-9677.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1[more]
A0A6J1KDY44.9e-9076.36uncharacterized protein LOC111494787 OS=Cucurbita maxima OX=3661 GN=LOC111494787... [more]
Match NameE-valueIdentityDescription
AT4G14746.18.9e-5252.25CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR33881NEUROGENIC LOCUS NOTCH-LIKE PROTEINcoord: 55..250
NoneNo IPR availablePANTHERPTHR33881:SF7NEUROGENIC LOCUS NOTCH-LIKE PROTEINcoord: 55..250

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS007650MS007650gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS007650.1-cdsMS007650.1-cds-scaffold13:168269..168524CDS
MS007650.1-cdsMS007650.1-cds-scaffold13:168677..168838CDS
MS007650.1-cdsMS007650.1-cds-scaffold13:169695..169775CDS
MS007650.1-cdsMS007650.1-cds-scaffold13:169874..169999CDS
MS007650.1-cdsMS007650.1-cds-scaffold13:170108..170203CDS
MS007650.1-cdsMS007650.1-cds-scaffold13:170408..170493CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS007650.1MS007650.1-proteinpolypeptide