Tan0003213 (gene) Snake gourd v1

Overview


Name	Tan0003213
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG03: 15061921 .. 15062574 (-)
RNA-Seq Expression	Tan0003213
Synteny	Tan0003213

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGCGCAATAATAGCACTACTCGCGTATGATAAGTTAGTGGGAGATAATTACCAAAGTTGGAAAAACAACATTAACACGATTTTGGTAACTGACGACATAAAGCTCGTGTTGTCTGAGGAGTGTCCTCAGATGCCGGGCTCGACCGCATCGCGAAGTGTTCGCGATGCGCATGATCGGTGGATCAGGGCAAATGAAAAGGCCAAGGTCTACATAATTGTCAGCATGTCTGATGTCTTGGCAAAGAAGCATGAGCTGATGGTCTCTGCCAAGGAGATCATGGAGTCCTTGCAGAAAATGTTTGGACAACTATCCTTTCAGGTCCGGCATGACTCCCTCAAATACGTTTTCAACGCATGGATGAAGGAGGGGTCGTCTGTCCGTGAACATGTTCTAGACATGATGACCCACTTTAATCTGTCCGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTTAGTTTTATTTTGGAGACTCTTCCAAAGAGTTTCCTTCAGTTTCGTAGCAATGTTGTTATGAACAAAATTAGCTACACTCTGACTACCCTCCTCAATGAGCTACAAAATTTCCAATCCTTGAAAAGGGTAAGGAATCTGAGGCAAATGTTGCCTACAGGTCTTATCACAGGGGTTCGACCGCGGATTTAA

mRNA sequence

ATGTCTAGCGCAATAATAGCACTACTCGCGTATGATAAGTTAGTGGGAGATAATTACCAAAGTTGGAAAAACAACATTAACACGATTTTGGTAACTGACGACATAAAGCTCGTGTTGTCTGAGGAGTGTCCTCAGATGCCGGGCTCGACCGCATCGCGAAGTGTTCGCGATGCGCATGATCGGTGGATCAGGGCAAATGAAAAGGCCAAGGTCTACATAATTGTCAGCATGTCTGATGTCTTGGCAAAGAAGCATGAGCTGATGGTCTCTGCCAAGGAGATCATGGAGTCCTTGCAGAAAATGTTTGGACAACTATCCTTTCAGGTCCGGCATGACTCCCTCAAATACGTTTTCAACGCATGGATGAAGGAGGGGTCGTCTGTCCGTGAACATGTTCTAGACATGATGACCCACTTTAATCTGTCCGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTTAGTTTTATTTTGGAGACTCTTCCAAAGAGTTTCCTTCAGTTTCGTAGCAATGTTGTTATGAACAAAATTAGCTACACTCTGACTACCCTCCTCAATGAGCTACAAAATTTCCAATCCTTGAAAAGGGTAAGGAATCTGAGGCAAATGTTGCCTACAGGTCTTATCACAGGGGTTCGACCGCGGATTTAA

Coding sequence (CDS)

ATGTCTAGCGCAATAATAGCACTACTCGCGTATGATAAGTTAGTGGGAGATAATTACCAAAGTTGGAAAAACAACATTAACACGATTTTGGTAACTGACGACATAAAGCTCGTGTTGTCTGAGGAGTGTCCTCAGATGCCGGGCTCGACCGCATCGCGAAGTGTTCGCGATGCGCATGATCGGTGGATCAGGGCAAATGAAAAGGCCAAGGTCTACATAATTGTCAGCATGTCTGATGTCTTGGCAAAGAAGCATGAGCTGATGGTCTCTGCCAAGGAGATCATGGAGTCCTTGCAGAAAATGTTTGGACAACTATCCTTTCAGGTCCGGCATGACTCCCTCAAATACGTTTTCAACGCATGGATGAAGGAGGGGTCGTCTGTCCGTGAACATGTTCTAGACATGATGACCCACTTTAATCTGTCCGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTTAGTTTTATTTTGGAGACTCTTCCAAAGAGTTTCCTTCAGTTTCGTAGCAATGTTGTTATGAACAAAATTAGCTACACTCTGACTACCCTCCTCAATGAGCTACAAAATTTCCAATCCTTGAAAAGGGTAAGGAATCTGAGGCAAATGTTGCCTACAGGTCTTATCACAGGGGTTCGACCGCGGATTTAA

Protein sequence

MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHDRWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNAWMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISYTLTTLLNELQNFQSLKRVRNLRQMLPTGLITGVRPRI

Homology

[Close]

BLAST of Tan0003213 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 7.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 7.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 7.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. NCBI nr
Match: KAA0051952.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 7.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 7.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

[Close]

BLAST of Tan0003213 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 132/199 (66.33%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MSSAIIALLAYDKLVGDNYQSWKNNINTILVTDDIKLVLSEECPQMPGSTASRSVRDAHD 60
           M+SA + +LA DKL G+NY SWKN INT+L+ DD++ VL EECPQ+P + A+R+VR+ ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIRANEKAKVYIIVSMSDVLAKKHELMVSAKEIMESLQKMFGQLSFQVRHDSLKYVFNA 120
           RW +ANEKA+ YI+ S+S+VLAKKHE M++A+EIM+SLQ+MFGQ S+Q++HD+LKY++NA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 WMKEGSSVREHVLDMMTHFNLSEMNGASIDESSQVSFILETLPKSFLQFRSNVVMNKISY 180
            M EG+SVREHVL+MM HFN++EMNGA IDE+SQVSFILE+LP+SFLQFRSN VMNKI+Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTLLNELQNFQSLKRVR 200
           TLTTLLNELQ F+SL +++
Sbjct: 181 TLTTLLNELQTFESLMKIK 199

The following BLAST results are available for this feature:

BLAST of Tan0003213 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003213 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	7.7e-72	66.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	7.7e-72	66.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	7.7e-72	66.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0051952.1	7.7e-72	66.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	7.7e-72	66.33	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Tan0003213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	3.7e-72	66.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	3.7e-72	66.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	3.7e-72	66.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	3.7e-72	66.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	3.7e-72	66.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Tan0003213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..191 e-value: 9.5E-16 score: 57.8
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 18..197
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 18..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003213.1	Tan0003213.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding