Homology
BLAST of MS004570 vs. NCBI nr
Match:
XP_022131430.1 (pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131438.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131447.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131456.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131464.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131472.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131480.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131490.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131498.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131508.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_022131516.1 pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia])
HSP 1 Score: 913.7 bits (2360), Expect = 6.2e-262
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
MAQLKMIRFSNSRLIDQVFV MLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF
Sbjct: 1 MAQLKMIRFSNSRLIDQVFVAMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF
Sbjct: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV
Sbjct: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS
Sbjct: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK
Sbjct: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
Query: 421 RIRHGIENRYREGKKVKLVMSRKEC 446
RIRHGIENRYRE KKVKLVMSRKEC
Sbjct: 421 RIRHGIENRYREVKKVKLVMSRKEC 445
BLAST of MS004570 vs. NCBI nr
Match:
XP_038896909.1 (pentatricopeptide repeat-containing protein At1g77405 [Benincasa hispida])
HSP 1 Score: 815.8 bits (2106), Expect = 1.8e-232
Identity = 390/443 (88.04%), Postives = 414/443 (93.45%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
MAQ +R SN RL+DQ+ V MLQNRPFDTHI + ST +T+ W+SESVSDVLRSVPRF
Sbjct: 1 MAQSNTLRLSNPRLVDQILVAMLQNRPFDTHIHSAASTSTTHHQWSSESVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHR PLKQRKLKEEAYKFRNNVLVLGPAAHRDP+KVELGLNKALEF
Sbjct: 61 FFQSARSIGTQKGFRHRAPLKQRKLKEEAYKFRNNVLVLGPAAHRDPFKVELGLNKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HFGF H+E+TCREMAC+LARGNRL GLWDFLKEMS+RG+GGLVTTATITCLIKV
Sbjct: 121 FYWVETHFGFQHDEITCREMACILARGNRLMGLWDFLKEMSRRGHGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGF PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFAPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDM++RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HGSATS
Sbjct: 301 KTYRIKRALELFEDMNKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGSATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE LEGGSVPREYTYQLVCN LNSAG+ SLLD+EVHK
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLEGGSVPREYTYQLVCNRLNSAGKPSLLDEEVHK 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRYRE KKVKL+MSRK
Sbjct: 421 RIRHGIENRYREVKKVKLIMSRK 443
BLAST of MS004570 vs. NCBI nr
Match:
TYK05755.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 806.6 bits (2082), Expect = 1.1e-229
Identity = 383/443 (86.46%), Postives = 415/443 (93.68%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R +N RL+DQ+ V MLQNRPFDTHI + ST +T+QLW+S+S+SDVLRSVPRF
Sbjct: 1 MVQPNTVRLTNHRLVDQILVAMLQNRPFDTHIHPAASTSTTHQLWSSDSISDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDP+KV+LGL+KALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPFKVKLGLSKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HFGF H+E+TCREMACVLARGNRL GLWDFLKEMS+RGNGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFGFQHDEITCREMACVLARGNRLMGLWDFLKEMSRRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGC+KAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCKKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIKRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE L+ GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLKEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRY+E KKVKL+MSRK
Sbjct: 421 RIRHGIENRYKEVKKVKLIMSRK 443
BLAST of MS004570 vs. NCBI nr
Match:
XP_008463528.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g77405 [Cucumis melo] >XP_008463529.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77405 [Cucumis melo])
HSP 1 Score: 803.9 bits (2075), Expect = 7.0e-229
Identity = 383/443 (86.46%), Postives = 414/443 (93.45%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R +N RL+DQ+ V MLQNRPFDTHI + ST +T+QLW+S+SVSDVLRSVPRF
Sbjct: 1 MVQPNTVRLTNHRLVDQILVAMLQNRPFDTHIHPAASTSTTHQLWSSDSVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDP+KV+LGL+KALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPFKVKLGLSKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HF F H+E+TCREMACVLARGNRL GLWDFLKEMS+RGNGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFEFQHDEITCREMACVLARGNRLMGLWDFLKEMSRRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGC+KAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCKKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIKRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE L+ GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLKEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRY+E KKVKL+MSRK
Sbjct: 421 RIRHGIENRYKEVKKVKLIMSRK 443
BLAST of MS004570 vs. NCBI nr
Match:
XP_004149831.1 (pentatricopeptide repeat-containing protein At1g77405 [Cucumis sativus] >KGN51257.1 hypothetical protein Csa_008923 [Cucumis sativus])
HSP 1 Score: 802.7 bits (2072), Expect = 1.6e-228
Identity = 382/443 (86.23%), Postives = 410/443 (92.55%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R SN RL+DQ+ V ML+NRPFDTH+ + ST +T+QLW+S+SVSDVLRSVPRF
Sbjct: 1 MVQPNTVRLSNHRLVDQILVAMLKNRPFDTHVHSAASTSTTHQLWSSDSVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGP AHRDP+K +LGLNKALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPGAHRDPFKAKLGLNKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HFGF H+E+TCREMACVLARGN L GLWDFLKEMS+R NGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFGFQHDEITCREMACVLARGNTLMGLWDFLKEMSRRENGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVIN LCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINVLCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIQRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE LE GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRYRE KKVKL+MSRK
Sbjct: 421 RIRHGIENRYREVKKVKLIMSRK 443
BLAST of MS004570 vs. ExPASy Swiss-Prot
Match:
Q1PFC5 (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana OX=3702 GN=At1g77405 PE=2 SV=1)
HSP 1 Score: 611.7 bits (1576), Expect = 6.6e-174
Identity = 286/434 (65.90%), Postives = 348/434 (80.18%), Query Frame = 0
Query: 12 SRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRFFFQSIRSIGCQ 71
+R++DQ+ M+QNRPFD + ST + W + VSDVL S+PRFFF S RSIG Q
Sbjct: 9 NRIVDQLITAMIQNRPFDAVLASST----VAKPWTQQLVSDVLHSIPRFFFISPRSIGRQ 68
Query: 72 KGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEFFYWVEIHFGFI 131
KGFRHR+PLKQR L +E+ + R+ VLVLGP A+ DP KV +GL KALEFF+W+E HFGF
Sbjct: 69 KGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFD 128
Query: 132 HNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNG-GLVTTATITCLIKVLGEQGLVNEA 191
HNE+TCR+MAC+LA+GN GLWDFL+++S+R NG +VTTA+ITCL+K LGE+G V EA
Sbjct: 129 HNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEA 188
Query: 192 LTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFTYTILI 251
L FYRMK++HCKPDVYAYNT+INALCRVGNFKKARFLL+QM+LPGFR PPD +TYTILI
Sbjct: 189 LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILI 248
Query: 252 SSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRIERALE 311
SSYC+Y +QTGCRKAIRRR+WEAN +FR MLF+GF PDVVTYN LIDGCCKT RI RALE
Sbjct: 249 SSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALE 308
Query: 312 LFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTPIIHAL 371
LFEDM +GC PN+VTYNSFIRYYSV NEI+ AIEM+R M+K+ HG SS+YTP+IHAL
Sbjct: 309 LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL 368
Query: 372 CEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHKRIRHGIENRY 431
E + EA D ++E +E G VPREYTY+LVC+ L+S G S LD+E+HKR+R GI+ RY
Sbjct: 369 VETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRY 428
Query: 432 REGKKVKLVMSRKE 445
K+K M+RKE
Sbjct: 429 SRVMKIKPTMARKE 438
BLAST of MS004570 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 1.5e-32
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0
Query: 126 IHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKVLGEQG 185
+ FG + ++ + + R+ +F++EMS + +G T L+ L + G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ-DGFFPDQYTFNTLVNGLCKAG 310
Query: 186 LVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFT 245
V A+ M Q PDVY YN+VI+ LC++G K+A +L+QM C P+ T
Sbjct: 311 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVT 370
Query: 246 YTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRI 305
Y LIS+ CK ++ EA L R++ KG PDV T+NSLI G C T
Sbjct: 371 YNTLISTLCK-----------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 430
Query: 306 ERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTP 365
A+ELFE+M +GC P+ TYN I ++D+A+ ML++M+ + + + +Y
Sbjct: 431 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSVITYNT 490
Query: 366 IIHALCEAGKVMEAHDFLLESLEGGSVPREYTY 399
+I C+A K EA + E G TY
Sbjct: 491 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
BLAST of MS004570 vs. ExPASy Swiss-Prot
Match:
Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.3e-32
Identity = 91/259 (35.14%), Postives = 125/259 (48.26%), Query Frame = 0
Query: 143 VLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKVL-GEQGLVNEALTAFYRMKQFH 202
+L N+L + F K M R G T A++ LIK L G V+ L F M +
Sbjct: 130 ILVEENQLNLAFKFYKNM--REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 189
Query: 203 CKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFTYTILISSYCKYSLQTG 262
C PD Y Y T+I+ LCR G +A+ L +M C P + TYT LI+ C
Sbjct: 190 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD--CAPTVVTYTSLINGLCG------ 249
Query: 263 CRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRIERALELFEDMSRRGCT 322
+ + EA M KG P+V TY+SL+DG CK R +A+ELFE M RGC
Sbjct: 250 -----SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 309
Query: 323 PNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTPIIHALCEAGKVMEAHD 382
PN VTY + I +I +A+E+L RM ++ + Y +I C K EA +
Sbjct: 310 PNMVTYTTLITGLCKEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAAN 369
Query: 383 FLLESLEGGSVPREYTYQL 401
FL E + GG P T+ +
Sbjct: 370 FLDEMILGGITPNRLTWNI 372
BLAST of MS004570 vs. ExPASy Swiss-Prot
Match:
P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.4e-30
Identity = 95/355 (26.76%), Postives = 160/355 (45.07%), Query Frame = 0
Query: 115 NKALEFFYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATI 174
N L+F +E++ G HN T M R + + L ++ K G T T
Sbjct: 105 NLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE--PDTTTF 164
Query: 175 TCLIKVLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMEL 234
LIK L +G V+EA+ RM + C+PDV YN+++N +CR G+ A LL +ME
Sbjct: 165 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 224
Query: 235 PGFRCPPDIFTYTILISSYCK--------------------------YSLQTGCRKAIR- 294
+ D+FTY+ +I S C+ SL G KA +
Sbjct: 225 RNVKA--DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 284
Query: 295 --------------------------------RRLWEANHLFRIMLFKGFTPDVVTYNSL 354
+L EAN L++ M+ +G +P+++TYN+L
Sbjct: 285 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 344
Query: 355 IDGCCKTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKH 411
+DG C R+ A + + M R C+P+ VT+ S I+ Y +V +D +++ R + K +
Sbjct: 345 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RG 404
BLAST of MS004570 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 5.3e-30
Identity = 83/249 (33.33%), Postives = 124/249 (49.80%), Query Frame = 0
Query: 173 TITCLIKVLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQM 232
T T LI+ V A+ M+ C PDV YN ++N +C+ G +A L M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 233 ELPGFRCPPDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTY 292
P C P++ T+ I++ S C TG R +A L ML KGF+P VVT+
Sbjct: 301 --PSSGCQPNVITHNIILRSMC----STG-------RWMDAEKLLADMLRKGFSPSVVTF 360
Query: 293 NSLIDGCCKTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQK 352
N LI+ C+ + RA+++ E M + GC PN ++YN + + ++D+AIE L RM
Sbjct: 361 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM-- 420
Query: 353 MKHGSATS-SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGET 412
+ G +Y ++ ALC+ GKV +A + L + G P TY V + L AG+T
Sbjct: 421 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 474
Query: 413 ----SLLDD 417
LLD+
Sbjct: 481 GKAIKLLDE 474
BLAST of MS004570 vs. ExPASy TrEMBL
Match:
A0A6J1BPU3 (pentatricopeptide repeat-containing protein At1g77405 OS=Momordica charantia OX=3673 GN=LOC111004642 PE=4 SV=1)
HSP 1 Score: 913.7 bits (2360), Expect = 3.0e-262
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
MAQLKMIRFSNSRLIDQVFV MLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF
Sbjct: 1 MAQLKMIRFSNSRLIDQVFVAMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF
Sbjct: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV
Sbjct: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS
Sbjct: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK
Sbjct: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
Query: 421 RIRHGIENRYREGKKVKLVMSRKEC 446
RIRHGIENRYRE KKVKLVMSRKEC
Sbjct: 421 RIRHGIENRYREVKKVKLVMSRKEC 445
BLAST of MS004570 vs. ExPASy TrEMBL
Match:
A0A5D3C2Y8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002440 PE=4 SV=1)
HSP 1 Score: 806.6 bits (2082), Expect = 5.2e-230
Identity = 383/443 (86.46%), Postives = 415/443 (93.68%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R +N RL+DQ+ V MLQNRPFDTHI + ST +T+QLW+S+S+SDVLRSVPRF
Sbjct: 1 MVQPNTVRLTNHRLVDQILVAMLQNRPFDTHIHPAASTSTTHQLWSSDSISDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDP+KV+LGL+KALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPFKVKLGLSKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HFGF H+E+TCREMACVLARGNRL GLWDFLKEMS+RGNGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFGFQHDEITCREMACVLARGNRLMGLWDFLKEMSRRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGC+KAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCKKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIKRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE L+ GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLKEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRY+E KKVKL+MSRK
Sbjct: 421 RIRHGIENRYKEVKKVKLIMSRK 443
BLAST of MS004570 vs. ExPASy TrEMBL
Match:
A0A1S3CL24 (pentatricopeptide repeat-containing protein At1g77405 OS=Cucumis melo OX=3656 GN=LOC103501662 PE=4 SV=1)
HSP 1 Score: 803.9 bits (2075), Expect = 3.4e-229
Identity = 383/443 (86.46%), Postives = 414/443 (93.45%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R +N RL+DQ+ V MLQNRPFDTHI + ST +T+QLW+S+SVSDVLRSVPRF
Sbjct: 1 MVQPNTVRLTNHRLVDQILVAMLQNRPFDTHIHPAASTSTTHQLWSSDSVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDP+KV+LGL+KALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPFKVKLGLSKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HF F H+E+TCREMACVLARGNRL GLWDFLKEMS+RGNGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFEFQHDEITCREMACVLARGNRLMGLWDFLKEMSRRGNGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGC+KAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCKKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIKRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE L+ GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLKEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRY+E KKVKL+MSRK
Sbjct: 421 RIRHGIENRYKEVKKVKLIMSRK 443
BLAST of MS004570 vs. ExPASy TrEMBL
Match:
A0A0A0KS49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505180 PE=4 SV=1)
HSP 1 Score: 802.7 bits (2072), Expect = 7.5e-229
Identity = 382/443 (86.23%), Postives = 410/443 (92.55%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRF 60
M Q +R SN RL+DQ+ V ML+NRPFDTH+ + ST +T+QLW+S+SVSDVLRSVPRF
Sbjct: 1 MVQPNTVRLSNHRLVDQILVAMLKNRPFDTHVHSAASTSTTHQLWSSDSVSDVLRSVPRF 60
Query: 61 FFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEF 120
FFQS RSIG QKGFRHRTPLKQRKLKEEAYKFRNNVLVLGP AHRDP+K +LGLNKALEF
Sbjct: 61 FFQSARSIGTQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPGAHRDPFKAKLGLNKALEF 120
Query: 121 FYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKV 180
FYWVE HFGF H+E+TCREMACVLARGN L GLWDFLKEMS+R NGGLVTTATITCLIKV
Sbjct: 121 FYWVETHFGFQHDEITCREMACVLARGNTLMGLWDFLKEMSRRENGGLVTTATITCLIKV 180
Query: 181 LGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCP 240
LGE+GLVNEALTAFYRMKQFHCKPDVYAYNTVIN LCR+GNFKKARFLLEQMELPGFRCP
Sbjct: 181 LGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINVLCRIGNFKKARFLLEQMELPGFRCP 240
Query: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCC 300
PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGF+PDVVTYNSLIDGCC
Sbjct: 241 PDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCC 300
Query: 301 KTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATS 360
KTYRI+RALELFEDMS+RGCTPNR+TYNSFIRYYS VNEID+AI+MLR MQKM HG ATS
Sbjct: 301 KTYRIQRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIATS 360
Query: 361 SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHK 420
SSYTPIIHALCE GKV+EA DFLLE LE GSVPREYTYQLVCNLLNSAG+ SLLD+ VH+
Sbjct: 361 SSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQLVCNLLNSAGKASLLDENVHE 420
Query: 421 RIRHGIENRYREGKKVKLVMSRK 444
RIRHGIENRYRE KKVKL+MSRK
Sbjct: 421 RIRHGIENRYREVKKVKLIMSRK 443
BLAST of MS004570 vs. ExPASy TrEMBL
Match:
A0A6J1FN49 (pentatricopeptide repeat-containing protein At1g77405 OS=Cucurbita moschata OX=3662 GN=LOC111445774 PE=4 SV=1)
HSP 1 Score: 786.2 bits (2029), Expect = 7.3e-224
Identity = 381/444 (85.81%), Postives = 406/444 (91.44%), Query Frame = 0
Query: 1 MAQLKMIRFSNSRLIDQVFVVMLQNRPFDTHIDRSTSTFST-NQLWNSESVSDVLRSVPR 60
MAQ +R N RL+DQ+ MLQNRPFDTHI + +T T +QLW+SE+VSDVLRSVPR
Sbjct: 1 MAQRNPLRLRNPRLVDQILAAMLQNRPFDTHIHCAATTSPTRHQLWSSETVSDVLRSVPR 60
Query: 61 FFFQSIRSIGCQKGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALE 120
FFQ+ RSIG QKGFRHR PLKQRKLKEEAYKF+NNVLVLGPAA+RDP KVELGLNKALE
Sbjct: 61 LFFQTTRSIGIQKGFRHRAPLKQRKLKEEAYKFQNNVLVLGPAANRDPLKVELGLNKALE 120
Query: 121 FFYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIK 180
FFYWVE HFGF H+EMTCREMACVLARGNR LW+F KEMS+RG GGL+TTATITCLIK
Sbjct: 121 FFYWVETHFGFQHDEMTCREMACVLARGNRSMRLWNFFKEMSRRG-GGLITTATITCLIK 180
Query: 181 VLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRC 240
VLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCR+GNFKKARFLLEQMELPGFRC
Sbjct: 181 VLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRIGNFKKARFLLEQMELPGFRC 240
Query: 241 PPDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGC 300
PPD+FTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGF PDVVTYN LIDGC
Sbjct: 241 PPDVFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFVPDVVTYNCLIDGC 300
Query: 301 CKTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSAT 360
CKTYRIERALELFEDM++RGCTPNRVTYNSFIRYYS VNEID+AI+MLR MQKM HG+AT
Sbjct: 301 CKTYRIERALELFEDMNKRGCTPNRVTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGTAT 360
Query: 361 SSSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVH 420
SSSYTPIIHALCEAGKV+EA DF LE LEGGSVPREYTYQLVCNLLNSAGE SLLD+EVH
Sbjct: 361 SSSYTPIIHALCEAGKVIEARDFFLELLEGGSVPREYTYQLVCNLLNSAGEASLLDEEVH 420
Query: 421 KRIRHGIENRYREGKKVKLVMSRK 444
+RIRHGIENRYRE KVKLVMSRK
Sbjct: 421 QRIRHGIENRYREVDKVKLVMSRK 443
BLAST of MS004570 vs. TAIR 10
Match:
AT1G77405.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 611.7 bits (1576), Expect = 4.7e-175
Identity = 286/434 (65.90%), Postives = 348/434 (80.18%), Query Frame = 0
Query: 12 SRLIDQVFVVMLQNRPFDTHIDRSTSTFSTNQLWNSESVSDVLRSVPRFFFQSIRSIGCQ 71
+R++DQ+ M+QNRPFD + ST + W + VSDVL S+PRFFF S RSIG Q
Sbjct: 9 NRIVDQLITAMIQNRPFDAVLASST----VAKPWTQQLVSDVLHSIPRFFFISPRSIGRQ 68
Query: 72 KGFRHRTPLKQRKLKEEAYKFRNNVLVLGPAAHRDPYKVELGLNKALEFFYWVEIHFGFI 131
KGFRHR+PLKQR L +E+ + R+ VLVLGP A+ DP KV +GL KALEFF+W+E HFGF
Sbjct: 69 KGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFD 128
Query: 132 HNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNG-GLVTTATITCLIKVLGEQGLVNEA 191
HNE+TCR+MAC+LA+GN GLWDFL+++S+R NG +VTTA+ITCL+K LGE+G V EA
Sbjct: 129 HNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEA 188
Query: 192 LTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFTYTILI 251
L FYRMK++HCKPDVYAYNT+INALCRVGNFKKARFLL+QM+LPGFR PPD +TYTILI
Sbjct: 189 LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILI 248
Query: 252 SSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRIERALE 311
SSYC+Y +QTGCRKAIRRR+WEAN +FR MLF+GF PDVVTYN LIDGCCKT RI RALE
Sbjct: 249 SSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALE 308
Query: 312 LFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTPIIHAL 371
LFEDM +GC PN+VTYNSFIRYYSV NEI+ AIEM+R M+K+ HG SS+YTP+IHAL
Sbjct: 309 LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL 368
Query: 372 CEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGETSLLDDEVHKRIRHGIENRY 431
E + EA D ++E +E G VPREYTY+LVC+ L+S G S LD+E+HKR+R GI+ RY
Sbjct: 369 VETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRY 428
Query: 432 REGKKVKLVMSRKE 445
K+K M+RKE
Sbjct: 429 SRVMKIKPTMARKE 438
BLAST of MS004570 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 142.1 bits (357), Expect = 1.1e-33
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0
Query: 126 IHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKVLGEQG 185
+ FG + ++ + + R+ +F++EMS + +G T L+ L + G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ-DGFFPDQYTFNTLVNGLCKAG 310
Query: 186 LVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFT 245
V A+ M Q PDVY YN+VI+ LC++G K+A +L+QM C P+ T
Sbjct: 311 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVT 370
Query: 246 YTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRI 305
Y LIS+ CK ++ EA L R++ KG PDV T+NSLI G C T
Sbjct: 371 YNTLISTLCK-----------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 430
Query: 306 ERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTP 365
A+ELFE+M +GC P+ TYN I ++D+A+ ML++M+ + + + +Y
Sbjct: 431 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSVITYNT 490
Query: 366 IIHALCEAGKVMEAHDFLLESLEGGSVPREYTY 399
+I C+A K EA + E G TY
Sbjct: 491 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
BLAST of MS004570 vs. TAIR 10
Match:
AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 141.0 bits (354), Expect = 2.4e-33
Identity = 91/259 (35.14%), Postives = 125/259 (48.26%), Query Frame = 0
Query: 143 VLARGNRLPGLWDFLKEMSKRGNGGLVTTATITCLIKVL-GEQGLVNEALTAFYRMKQFH 202
+L N+L + F K M R G T A++ LIK L G V+ L F M +
Sbjct: 130 ILVEENQLNLAFKFYKNM--REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 189
Query: 203 CKPDVYAYNTVINALCRVGNFKKARFLLEQMELPGFRCPPDIFTYTILISSYCKYSLQTG 262
C PD Y Y T+I+ LCR G +A+ L +M C P + TYT LI+ C
Sbjct: 190 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD--CAPTVVTYTSLINGLCG------ 249
Query: 263 CRKAIRRRLWEANHLFRIMLFKGFTPDVVTYNSLIDGCCKTYRIERALELFEDMSRRGCT 322
+ + EA M KG P+V TY+SL+DG CK R +A+ELFE M RGC
Sbjct: 250 -----SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 309
Query: 323 PNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKHGSATSSSYTPIIHALCEAGKVMEAHD 382
PN VTY + I +I +A+E+L RM ++ + Y +I C K EA +
Sbjct: 310 PNMVTYTTLITGLCKEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAAN 369
Query: 383 FLLESLEGGSVPREYTYQL 401
FL E + GG P T+ +
Sbjct: 370 FLDEMILGGITPNRLTWNI 372
BLAST of MS004570 vs. TAIR 10
Match:
AT1G12700.1 (ATP binding;nucleic acid binding;helicases )
HSP 1 Score: 135.6 bits (340), Expect = 9.9e-32
Identity = 95/355 (26.76%), Postives = 160/355 (45.07%), Query Frame = 0
Query: 115 NKALEFFYWVEIHFGFIHNEMTCREMACVLARGNRLPGLWDFLKEMSKRGNGGLVTTATI 174
N L+F +E++ G HN T M R + + L ++ K G T T
Sbjct: 105 NLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE--PDTTTF 164
Query: 175 TCLIKVLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQMEL 234
LIK L +G V+EA+ RM + C+PDV YN+++N +CR G+ A LL +ME
Sbjct: 165 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 224
Query: 235 PGFRCPPDIFTYTILISSYCK--------------------------YSLQTGCRKAIR- 294
+ D+FTY+ +I S C+ SL G KA +
Sbjct: 225 RNVKA--DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 284
Query: 295 --------------------------------RRLWEANHLFRIMLFKGFTPDVVTYNSL 354
+L EAN L++ M+ +G +P+++TYN+L
Sbjct: 285 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 344
Query: 355 IDGCCKTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQKMKH 411
+DG C R+ A + + M R C+P+ VT+ S I+ Y +V +D +++ R + K +
Sbjct: 345 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RG 404
BLAST of MS004570 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 133.7 bits (335), Expect = 3.8e-31
Identity = 83/249 (33.33%), Postives = 124/249 (49.80%), Query Frame = 0
Query: 173 TITCLIKVLGEQGLVNEALTAFYRMKQFHCKPDVYAYNTVINALCRVGNFKKARFLLEQM 232
T T LI+ V A+ M+ C PDV YN ++N +C+ G +A L M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 233 ELPGFRCPPDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFTPDVVTY 292
P C P++ T+ I++ S C TG R +A L ML KGF+P VVT+
Sbjct: 301 --PSSGCQPNVITHNIILRSMC----STG-------RWMDAEKLLADMLRKGFSPSVVTF 360
Query: 293 NSLIDGCCKTYRIERALELFEDMSRRGCTPNRVTYNSFIRYYSVVNEIDKAIEMLRRMQK 352
N LI+ C+ + RA+++ E M + GC PN ++YN + + ++D+AIE L RM
Sbjct: 361 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM-- 420
Query: 353 MKHGSATS-SSYTPIIHALCEAGKVMEAHDFLLESLEGGSVPREYTYQLVCNLLNSAGET 412
+ G +Y ++ ALC+ GKV +A + L + G P TY V + L AG+T
Sbjct: 421 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 474
Query: 413 ----SLLDD 417
LLD+
Sbjct: 481 GKAIKLLDE 474
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022131430.1 | 6.2e-262 | 99.55 | pentatricopeptide repeat-containing protein At1g77405 [Momordica charantia] >XP_... | [more] |
XP_038896909.1 | 1.8e-232 | 88.04 | pentatricopeptide repeat-containing protein At1g77405 [Benincasa hispida] | [more] |
TYK05755.1 | 1.1e-229 | 86.46 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008463528.1 | 7.0e-229 | 86.46 | PREDICTED: pentatricopeptide repeat-containing protein At1g77405 [Cucumis melo] ... | [more] |
XP_004149831.1 | 1.6e-228 | 86.23 | pentatricopeptide repeat-containing protein At1g77405 [Cucumis sativus] >KGN5125... | [more] |
Match Name | E-value | Identity | Description | |
Q1PFC5 | 6.6e-174 | 65.90 | Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 1.5e-32 | 31.87 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FNL2 | 3.3e-32 | 35.14 | Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... | [more] |
P0C7Q7 | 1.4e-30 | 26.76 | Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
Q3EDF8 | 5.3e-30 | 33.33 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BPU3 | 3.0e-262 | 99.55 | pentatricopeptide repeat-containing protein At1g77405 OS=Momordica charantia OX=... | [more] |
A0A5D3C2Y8 | 5.2e-230 | 86.46 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CL24 | 3.4e-229 | 86.46 | pentatricopeptide repeat-containing protein At1g77405 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0KS49 | 7.5e-229 | 86.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505180 PE=4 SV=1 | [more] |
A0A6J1FN49 | 7.3e-224 | 85.81 | pentatricopeptide repeat-containing protein At1g77405 OS=Cucurbita moschata OX=3... | [more] |
Match Name | E-value | Identity | Description | |
AT1G77405.1 | 4.7e-175 | 65.90 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.1e-33 | 31.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G46100.1 | 2.4e-33 | 35.14 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12700.1 | 9.9e-32 | 26.76 | ATP binding;nucleic acid binding;helicases | [more] |
AT1G09900.1 | 3.8e-31 | 33.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |