MS002120 (gene) Bitter gourd (TR) v1

Overview


Name	MS002120
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold30: 2495308 .. 2496016 (-)
RNA-Seq Expression	MS002120
Synteny	MS002120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGACGGAATCTGTGGTCTGCCCGAAGCCACGTCGTTTGGTTCTGCAAACTCCTGATAATGACCCCATCAGAGCCCATAGATGGCCCCTCAAGTTCGTTAATCCCCGTTTAATCTTCTTTTTGCCAGAATTAGAAACCTTCTGCTTTTGATTATGTAGATTTGAACTTGAATCTCTTCGAATAAACTTCTGATACATATGAATCTGCTTCCTTACAGCCACCCAAAGACTGGAAATTCAAAAGCAGGAGCGGAGCTTTTGGACATGATCCTCACTAAGGTTCTTAATAATCCCTCACCCTGCAAATTCTCGGTCGTTTATCTTGATTGATTACTTGTTTATCAACAATCTCTTAACTATGGTTCATCTTAACATTATAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCAACATCTCCCCCATTCTTTTGGGGGTCTCCACCAAGCAGGGCTTCCAACCCTGTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATACCTACCAACTTTGTGAAGGAGGGCCGCCATCTCCATCGACCCGTAAAGGAGGATGCGCCCGAATGAAATTCGGGCACCGACCCGCAGCAGTCCGAATCGAAGGATTCGACTGTCTTGGTCGAGATTCTAGAAATTGCAGCATTTCAGCTGTGGCT

mRNA sequence

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGACGGAATCTGTGGTCTGCCCGAAGCCACGTCGTTTGGTTCTGCAAACTCCTGATAATGACCCCATCAGAGCCCATAGATGGCCCCTCAACCACCCAAAGACTGGAAATTCAAAAGCAGGAGCGGAGCTTTTGGACATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCAACATCTCCCCCATTCTTTTGGGGGTCTCCACCAAGCAGGGCTTCCAACCCTGTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATACCTACCAACTTTGTGAAGGAGGGCCGCCATCTCCATCGACCCGTAAAGGAGGATGCGCCCGAATGAAATTCGGGCACCGACCCGCAGCAGTCCGAATCGAAGGATTCGACTGTCTTGGTCGAGATTCTAGAAATTGCAGCATTTCAGCTGTGGCT

Coding sequence (CDS)

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGACGGAATCTGTGGTCTGCCCGAAGCCACGTCGTTTGGTTCTGCAAACTCCTGATAATGACCCCATCAGAGCCCATAGATGGCCCCTCAACCACCCAAAGACTGGAAATTCAAAAGCAGGAGCGGAGCTTTTGGACATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCAACATCTCCCCCATTCTTTTGGGGGTCTCCACCAAGCAGGGCTTCCAACCCTGTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATACCTACCAACTTTGTGAAGGAGGGCCGCCATCTCCATCGACCCGTAAAGGAGGATGCGCCCGAATGAAATTCGGGCACCGACCCGCAGCAGTCCGAATCGAAGGATTCGACTGTCTTGGTCGAGATTCTAGAAATTGCAGCATTTCAGCTGTGGCT

Protein sequence

MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA

Homology

[Close]

BLAST of MS002120 vs. NCBI nr
Match: XP_022134608.1 (uncharacterized protein LOC111006835 [Momordica charantia])

HSP 1 Score: 343.6 bits (880), Expect = 9.3e-91
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE 60
           MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE
Sbjct: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE 60

Query: 61  LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS 120
           LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS
Sbjct: 61  LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS 120

Query: 121 PSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           PSTRKGGCARMKFGHRPAAVRIEGFDCLGRD+RNCSISAVA
Sbjct: 121 PSTRKGGCARMKFGHRPAAVRIEGFDCLGRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. NCBI nr
Match: XP_038878157.1 (uncharacterized protein LOC120070307 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 147/162 (90.74%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGA 60
           MNRWVYEQNAMAACQEMR ESVVCPKPRRLVLQT PDNDPIRA+RWP++H +TGNS+AGA
Sbjct: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPISHSRTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPP 120
           E LDMILTKESYGENFSHQLATSPP FWGSPPSRASNP+VQDEQFGNGNN YQLCE GPP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPSFWGSPPSRASNPLVQDEQFGNGNNIYQLCE-GPP 120

Query: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           SPSTRKGGCARMKFGHRPAAVRIEGFDCL  DSRNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNHDSRNCSISAVA 161

[Close]

BLAST of MS002120 vs. NCBI nr
Match: XP_008453392.1 (PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 uncharacterized protein E6C27_scaffold274G003810 [Cucumis melo var. makuwa] >TYK28426.1 uncharacterized protein E5676_scaffold629G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 6.9e-78
Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGA 60
           M+RWVYEQNAMAACQEMR ESVVCPKPRRLV QT PDNDPI A+RWP++HP TGNS+AGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNT-YQLCEGGP 120
           E LDMILTKESYGENFSHQLATSPPFFWGSPPSRASNP+VQDEQFGNGNNT YQ CE GP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCE-GP 120

Query: 121 PSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           PSPSTRKGGCAR KFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 PSPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of MS002120 vs. NCBI nr
Match: XP_022965248.1 (uncharacterized protein LOC111465166 [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTP-DNDPIRAHRWPLNHPKTGNSKAGA 60
           MN+WVYEQNAMAACQEMR ESVVCPKPRRLVLQTP DNDPIRAHRWP++H KTGNSKAGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPYDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPP 120
           ELLDMILTKESYGE +S QL TSPPFFWGSPPSRASNP+VQDEQFGN NN YQ  E GPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGNRNNMYQASE-GPP 120

Query: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           SPSTRKGGCARMKFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. NCBI nr
Match: XP_022933584.1 (uncharacterized protein LOC111440968 [Cucurbita moschata] >KAG7021608.1 hypothetical protein SDJN02_15334 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTP-DNDPIRAHRWPLNHPKTGNSKAGA 60
           MN+WVYEQNAMAACQEMR ESVVCPKPRRLVLQTP DNDPIRAHRWP++H KTGNSKAGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPNDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPP 120
           ELLDMILTKESYGE +S QL TSPPFFWGSPPSRASNP+VQDEQFGN NN YQ  E GPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGNRNNMYQASE-GPP 120

Query: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           SPSTRKGGCARMKFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. ExPASy TrEMBL
Match: A0A6J1C2G9 (uncharacterized protein LOC111006835 OS=Momordica charantia OX=3673 GN=LOC111006835 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.5e-91
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE 60
           MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE
Sbjct: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTGNSKAGAE 60

Query: 61  LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS 120
           LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS
Sbjct: 61  LLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPPS 120

Query: 121 PSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           PSTRKGGCARMKFGHRPAAVRIEGFDCLGRD+RNCSISAVA
Sbjct: 121 PSTRKGGCARMKFGHRPAAVRIEGFDCLGRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. ExPASy TrEMBL
Match: A0A5A7USD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00560 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGA 60
           M+RWVYEQNAMAACQEMR ESVVCPKPRRLV QT PDNDPI A+RWP++HP TGNS+AGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNT-YQLCEGGP 120
           E LDMILTKESYGENFSHQLATSPPFFWGSPPSRASNP+VQDEQFGNGNNT YQ CE GP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCE-GP 120

Query: 121 PSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           PSPSTRKGGCAR KFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 PSPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of MS002120 vs. ExPASy TrEMBL
Match: A0A1S3BVK5 (uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGA 60
           M+RWVYEQNAMAACQEMR ESVVCPKPRRLV QT PDNDPI A+RWP++HP TGNS+AGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNT-YQLCEGGP 120
           E LDMILTKESYGENFSHQLATSPPFFWGSPPSRASNP+VQDEQFGNGNNT YQ CE GP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCE-GP 120

Query: 121 PSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           PSPSTRKGGCAR KFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 PSPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of MS002120 vs. ExPASy TrEMBL
Match: A0A6J1HNB7 (uncharacterized protein LOC111465166 OS=Cucurbita maxima OX=3661 GN=LOC111465166 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.7e-78
Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTP-DNDPIRAHRWPLNHPKTGNSKAGA 60
           MN+WVYEQNAMAACQEMR ESVVCPKPRRLVLQTP DNDPIRAHRWP++H KTGNSKAGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPYDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPP 120
           ELLDMILTKESYGE +S QL TSPPFFWGSPPSRASNP+VQDEQFGN NN YQ  E GPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGNRNNMYQASE-GPP 120

Query: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           SPSTRKGGCARMKFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. ExPASy TrEMBL
Match: A0A6J1F062 (uncharacterized protein LOC111440968 OS=Cucurbita moschata OX=3662 GN=LOC111440968 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.7e-78
Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQTP-DNDPIRAHRWPLNHPKTGNSKAGA 60
           MN+WVYEQNAMAACQEMR ESVVCPKPRRLVLQTP DNDPIRAHRWP++H KTGNSKAGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPNDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNTYQLCEGGPP 120
           ELLDMILTKESYGE +S QL TSPPFFWGSPPSRASNP+VQDEQFGN NN YQ  E GPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGNRNNMYQASE-GPP 120

Query: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           SPSTRKGGCARMKFGHRPAAVRIEGFDCL RD+RNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of MS002120 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 79/184 (42.93%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRTES----------VVCPKPRRLVLQTPDNDPIRAHRWPLNHP 60
           MN +  + NA AA  ++R+ S          VVCPKPRR+ L+   + P R+ R   +H 
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQ 60

Query: 61  -KTGNSKAGAELLDMILTKESYG-ENFSHQLATSP-PFFWGSPPSRASNPVVQDEQFGNG 120
            +   SKA  ++LD+ILTK+ YG E  + Q+  SP PF  GSPPSR +NP+ QD +F + 
Sbjct: 61  LELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFRDE 120

Query: 121 NNTYQLC---------EGGPPSPSTRKGGC-ARMKFGHRPAAVRIEGFDCLGRDSRNCSI 162
             +                P S S RKGGC  R  FG+ P  VR+EGFDCL RDSRNCSI
Sbjct: 121 IVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSP-KVRVEGFDCLDRDSRNCSI 180

[Close]

BLAST of MS002120 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 77/174 (44.25%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMR---------TESVVCPKPRRL--VLQTPDNDPIRAHRWPLNH 60
           MN    +QNA  + +E R          +SVVCPKPRR   V++     P R H      
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRANNVIR-----PFRLHFSLSGA 60

Query: 61  PKTGNSKAGAELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNG-- 120
               +SKAG +LLD+   KES         + SPPFF GSPPSRA+NP+ QD +FG+   
Sbjct: 61  DDVCDSKAGEDLLDIFRRKESVS-------SRSPPFFLGSPPSRAANPLAQDARFGDEKL 120

Query: 121 NNTYQLCEGGPPSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
           N          PS S  K GC RMKFG +PA VR+EGFDCL RD  N SI A+A
Sbjct: 121 NTVSPSLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]

BLAST of MS002120 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26
Identity = 79/181 (43.65%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEM----RTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHPKTG--N 60
           MN    +QNA  + +EM    R + VVCPKPRR+ L    N+ IR  R  ++       +
Sbjct: 67  MNHCNLQQNAFMSREEMMGFDRKDLVVCPKPRRVGLLA--NNVIRPLRLHMSQAAADLCD 126

Query: 61  SKAGAELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQF---------G 120
           SKAGAELL++I  KE  G      L++SPP+F GSPPSRA+NP+ QD +F          
Sbjct: 127 SKAGAELLEIIRRKEDNG-TIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISP 186

Query: 121 NGNNTYQLCEGGPPSPSTRKG-----GCARMKFGHRPAAVRIEGFDCLGRDSRNCSISAV 162
           N          G PSPS+        GC RMKFG    AVR+EGFDCL RD +N SI A+
Sbjct: 187 NSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPAM 244

[Close]

BLAST of MS002120 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18
Identity = 66/170 (38.82%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 6   YEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHP-KTGNSKAGAELLDM 65
           +E+    A    R ++V+CPKPRR  +   ++   R+ RW LNH  +   S +G+E+LD 
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRR--VGALNHHSSRSLRWQLNHQMELCESNSGSEILDF 71

Query: 66  ILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPVVQDEQF--------GNGNNTYQL 125
           ILTK   G   ++ +  + T P FF GSPPSR SNP+ +D  F            +T + 
Sbjct: 72  ILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVASPSPSTPRA 131

Query: 126 CEGGPPSPSTRKGGC--ARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
            +  PPS S R G C  A   FG+ P  VR+ GFDC  R S N SIS +A
Sbjct: 132 TKPQPPS-SPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

[Close]

BLAST of MS002120 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18
Identity = 66/170 (38.82%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 6   YEQNAMAACQEMRTESVVCPKPRRLVLQTPDNDPIRAHRWPLNHP-KTGNSKAGAELLDM 65
           +E+    A    R ++V+CPKPRR  +   ++   R+ RW LNH  +   S +G+E+LD 
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRR--VGALNHHSSRSLRWQLNHQMELCESNSGSEILDF 71

Query: 66  ILTKESYG---ENFSHQLATSPPFFWGSPPSRASNPVVQDEQF--------GNGNNTYQL 125
           ILTK   G   ++ +  + T P FF GSPPSR SNP+ +D  F            +T + 
Sbjct: 72  ILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVASPSPSTPRA 131

Query: 126 CEGGPPSPSTRKGGC--ARMKFGHRPAAVRIEGFDCLGRDSRNCSISAVA 162
            +  PPS S R G C  A   FG+ P  VR+ GFDC  R S N SIS +A
Sbjct: 132 TKPQPPS-SPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

The following BLAST results are available for this feature:

BLAST of MS002120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134608.1	9.3e-91	99.38	uncharacterized protein LOC111006835 [Momordica charantia]	[more]
XP_038878157.1	4.3e-80	90.74	uncharacterized protein LOC120070307 [Benincasa hispida]	[more]
XP_008453392.1	6.9e-78	88.96	PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 unc...	[more]
XP_022965248.1	1.2e-77	88.89	uncharacterized protein LOC111465166 [Cucurbita maxima]	[more]
XP_022933584.1	1.2e-77	88.89	uncharacterized protein LOC111440968 [Cucurbita moschata] >KAG7021608.1 hypothet...	[more]

BLAST of MS002120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2G9	4.5e-91	99.38	uncharacterized protein LOC111006835 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5A7USD0	3.4e-78	88.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BVK5	3.4e-78	88.96	uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=...	[more]
A0A6J1HNB7	5.7e-78	88.89	uncharacterized protein LOC111465166 OS=Cucurbita maxima OX=3661 GN=LOC111465166...	[more]
A0A6J1F062	5.7e-78	88.89	uncharacterized protein LOC111440968 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of MS002120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	2.0e-27	42.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	1.3e-26	44.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	2.9e-26	43.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	3.0e-18	38.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	3.0e-18	38.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..161
None	No IPR available	PANTHER	PTHR33384:SF22	SUBFAMILY NOT NAMED	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002120.1	MS002120.1	mRNA