MS027942 (gene) Bitter gourd (TR) v1

Overview


Name	MS027942
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	auxin-responsive protein SAUR24-like
Location	scaffold375: 1521306 .. 1521599 (+)
RNA-Seq Expression	MS027942
Synteny	MS027942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCTTTGGTTCCACATGCCAAACAAATTTTAAAGATGCAGTCAAGTTTCACCAAAAACCAGATGGATGTTCCAAAAAGCCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCGTACTTGAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCACATGCCAAACAAATTTTAAAGATGCAGTCAAGTTTCACCAAAAACCAGATGGATGTTCCAAAAAGCCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCGTACTTGAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCACATGCCAAACAAATTTTAAAGATGCAGTCAAGTTTCACCAAAAACCAGATGGATGTTCCAAAAAGCCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCGTACTTGAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

Homology

[Close]

BLAST of MS027942 vs. NCBI nr
Match: XP_022146170.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 198.7 bits (504), Expect = 2.2e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. NCBI nr
Match: XP_022947574.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo] >KAG6605015.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia] >KAG6605021.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQS FTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. NCBI nr
Match: XP_022947577.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6605024.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQS FTKNQ+DVPK HVAVYVGEIQRKRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PK  +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027942 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PK  +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of MS027942 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-22
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PK  +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of MS027942 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.8e-22
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PK  +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027942 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.8e-22
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   ++        PK  +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of MS027942 vs. ExPASy TrEMBL
Match: A0A6J1CWI9 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015449 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. ExPASy TrEMBL
Match: A0A6J1G772 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451397 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.9e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQS FTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. ExPASy TrEMBL
Match: A0A6J1G6U7 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451400 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQS FTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027942 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGE-IQRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PK H+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of MS027942 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQMD------VPKSHVAVYVG---EIQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPK HVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of MS027942 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILK----MQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + SS + + +DVPK ++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of MS027942 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQMD-----------VPKSHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPK HVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of MS027942 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 8.2e-24
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PK  +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of MS027942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146170.1	2.2e-47	100.00	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_022947574.1	1.2e-45	94.85	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-...	[more]
XP_022944365.1	3.6e-45	94.85	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022947577.1	3.6e-45	93.81	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-...	[more]
XP_022944366.1	7.9e-45	93.81	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]

BLAST of MS027942 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.2e-22	64.56	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	1.5e-22	64.56	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	2.6e-22	63.29	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	5.8e-22	63.29	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	5.8e-22	60.71	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of MS027942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWI9	1.1e-47	100.00	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G772	5.9e-46	94.85	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1JHE3	1.7e-45	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1G6U7	1.7e-45	93.81	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1FVI4	1.7e-45	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of MS027942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	1.4e-26	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.3e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.0e-26	58.76	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	2.8e-24	53.70	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	8.2e-24	64.56	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..93 e-value: 2.8E-26 score: 91.5
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS027942.1	MS027942.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin