MC09g_new0131 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0131
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	myosin light chain kinase, smooth muscle-like isoform X2
Location	MC09: 5410699 .. 5411920 (-)
RNA-Seq Expression	MC09g_new0131
Synteny	MC09g_new0131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTATGCCCTTAAAAATCGTAAGAATAGAAAACTGTACAACCCAAAATGTTTGAAGCAGTCTAAATTTATTGAACTTTTCTATATATAACTTCCCATCAAACAAGTATATATAAGGCATTGATCATCTGAATTTCTCAAGCACCCACAACTTCGTTATAATTGCTTAATAAACCATCCTCTGTGAAACTAGCTTGTGCCTCAAACTTTAAGACATATTTCACCATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGGTGAGGGTCCCGCTGCCATAGTTGGGGGTCCCGCCGTCGCATTTGGGGGTCCCGCTGCAGGAGCCGCTCCCATTGAGGGTCCTGCTCCAGTTGAGGGTCCCGCTCCAGTTGAGGGTCCCGCCGCAGGGGTCGCTCCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGAACAAAATAAAATACATGGACCACCATAATATTTAAACATGAATGATGTGGTAAATTTATAAAGTTTACATAGGTATTCTTTCGATACTTTGGTCTCTTTCAAAGCAAGGAAAAAAAAAAGAAAAAAAAAAACTTGCGAGATCAATTATCCTTCCTAGCTTTTTCAAGTCCCATTCTAATGATTGTAAGCATCTTTTTGAGTTCAAGTAAAAGATCAGCATCTAACTGGGTCCCTTAAATCATATATAATAAAAGACATTAAAATTTAAGCCTTTGTTTAGAGTCTTGATCAGAACATCCTTATCAATTAAAAATAAAGAAATTATGTTAAACTCTAGCATTGCTTAATATACACAAGGGTATATAGTTTAGGGATGTTGAGAAAAATCGAGCAATTAATCCGAATCGAG

mRNA sequence

ATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGA

Coding sequence (CDS)

ATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGA

Protein sequence

MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSPMGAPVQGPTAATSPVEGPVAAEMSPVEGPAAASPMDGPVAGAANPVEGPAAGAASPVEGPTAIGAASPVEGPAVAVEGPAGGTAPVQSS

Homology

[Close]

BLAST of MC09g_new0131 vs. NCBI nr
Match: XP_022146267.1 (uncharacterized protein LOC111015518 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 2.57e-19
Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEAD--LDRPFSFRAFGSHG-----PI 60
          MAM RGSK FH LFL+FVWQFCGEVGATFND+TG A   L  PFSFRAFG HG     P 
Sbjct: 1  MAMGRGSKFFHTLFLVFVWQFCGEVGATFNDITGVAKTGLHEPFSFRAFGPHGGDSQSPT 60

[Close]

BLAST of MC09g_new0131 vs. NCBI nr
Match: XP_022975300.1 (uncharacterized protein LOC111474444 isoform X2 [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 4.47e-15
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAAT 72
           S        P G+  Q P A T
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALT 83

[Close]

BLAST of MC09g_new0131 vs. NCBI nr
Match: XP_022975301.1 (uncharacterized protein LOC111474444 isoform X3 [Cucurbita maxima])

HSP 1 Score: 77.0 bits (188), Expect = 5.55e-15
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSP 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    AP+ +P
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHD-TQAPIVAP 60

Query: 61 MG 62
          +G
Sbjct: 61 IG 61

[Close]

BLAST of MC09g_new0131 vs. NCBI nr
Match: XP_022975298.1 (uncharacterized protein LOC111474444 isoform X1 [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 6.05e-15
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAAT 72
           S        P G+  Q P A T
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALT 83

[Close]

BLAST of MC09g_new0131 vs. NCBI nr
Match: XP_022925496.1 (uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_022925497.1 uncharacterized protein LOC111432782 isoform X2 [Cucurbita moschata])

HSP 1 Score: 76.3 bits (186), Expect = 1.29e-14
Identity = 44/83 (53.01%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHG---PIGAP- 60
          MAM +G KLFH LFL+  WQ+C +VGAT+ DVTG   LD  FSFRAFGSH    P  AP 
Sbjct: 1  MAMGKGFKLFHTLFLVVAWQYCVKVGATYGDVTGVVKLDHQFSFRAFGSHDTQTPAIAPI 60

Query: 61 -------VQSPMGAPVQGPTAAT 72
                 V SP G+  Q P A T
Sbjct: 61 ASSTEVLVASPFGSIAQTPEALT 83

[Close]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1CZ48 (uncharacterized protein LOC111015518 OS=Momordica charantia OX=3673 GN=LOC111015518 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.25e-19
Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEAD--LDRPFSFRAFGSHG-----PI 60
          MAM RGSK FH LFL+FVWQFCGEVGATFND+TG A   L  PFSFRAFG HG     P 
Sbjct: 1  MAMGRGSKFFHTLFLVFVWQFCGEVGATFNDITGVAKTGLHEPFSFRAFGPHGGDSQSPT 60

[Close]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1IGC2 (uncharacterized protein LOC111474444 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.16e-15
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAAT 72
           S        P G+  Q P A T
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALT 83

[Close]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1IDS8 (uncharacterized protein LOC111474444 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.69e-15
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSP 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    AP+ +P
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHD-TQAPIVAP 60

Query: 61 MG 62
          +G
Sbjct: 61 IG 61

[Close]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1IIT3 (uncharacterized protein LOC111474444 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.93e-15
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAAT 72
           S        P G+  Q P A T
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALT 83

[Close]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1ECD3 (uncharacterized protein LOC111432782 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432782 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.24e-15
Identity = 44/83 (53.01%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHG---PIGAP- 60
          MAM +G KLFH LFL+  WQ+C +VGAT+ DVTG   LD  FSFRAFGSH    P  AP 
Sbjct: 1  MAMGKGFKLFHTLFLVVAWQYCVKVGATYGDVTGVVKLDHQFSFRAFGSHDTQTPAIAPI 60

Query: 61 -------VQSPMGAPVQGPTAAT 72
                 V SP G+  Q P A T
Sbjct: 61 ASSTEVLVASPFGSIAQTPEALT 83

The following BLAST results are available for this feature:

BLAST of MC09g_new0131 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146267.1	2.57e-19	69.12	uncharacterized protein LOC111015518 [Momordica charantia]	[more]
XP_022975300.1	4.47e-15	51.81	uncharacterized protein LOC111474444 isoform X2 [Cucurbita maxima]	[more]
XP_022975301.1	5.55e-15	58.06	uncharacterized protein LOC111474444 isoform X3 [Cucurbita maxima]	[more]
XP_022975298.1	6.05e-15	51.81	uncharacterized protein LOC111474444 isoform X1 [Cucurbita maxima]	[more]
XP_022925496.1	1.29e-14	53.01	uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_0229254...	[more]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ48	1.25e-19	69.12	uncharacterized protein LOC111015518 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1IGC2	2.16e-15	51.81	uncharacterized protein LOC111474444 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IDS8	2.69e-15	58.06	uncharacterized protein LOC111474444 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IIT3	2.93e-15	51.81	uncharacterized protein LOC111474444 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ECD3	6.24e-15	53.01	uncharacterized protein LOC111432782 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MC09g_new0131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0131.1	MC09g_new0131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process