MC04g_new0538 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTTACTCAATAACTCGTATGAAAAAAAAAACTTTTTTCTTAACGTAGCGGTAAGATTTTTAATATGTTGAAGGGAAAAAAATATAGAATAGCCTTTTTTTTTTTGAAAAACAAAAATAGAATAACTTTTTCTTTTTTTTTTTTTTCCTAAAAGGTCTTATTATTTTTTTAGTACAAAACTGAATACGGGAGACTCAAACTCATATGACCTCTTGATTAGAGATATTGCCAATGACGTAAATAGCTTTACGAAAAGATGGATATTATAATATTTAATATTTTTAATATTATATTCTCTCTCTAATTTTACAGTATAAATTGAAGTTATCTCACTAAACTCAACAATAATAATTCATTTAATCAATATGCATGGTGTTACTTTATGTTACATTGTTTTTCTCTTCATTGAAGTGATTTTAACAAATTATTCATTAATATAATCACACTTATAAATAGCTTTGTGTTTTTAAAAAGCACAAGAAAAGTCGGAGGGAACCAAAAAAAAAAAAAACAGAGAGAGAAAGAAATACTTTCAACTCAACAATGACAAAGGGAATTAAAAGGATTGCACCAGCACTGGTGGTGGTTCTTTTATTGGTACTAAATTTGTCAGCCTTCGGTCAACCTTCAATAGTAGACGACGACAACTACATGTCACCCATATGGAATGGATGGATAGACGAAGATAGAGGGATAAATCTAAGACGGTGTATAGTTAGAGTGAAGAGTGAAAAATGTCAAGTGGAAGTTTATAAATATTACTTCAATATAAACAAGAAGGAAGTGGATCTAAGTTGTTGTGTATTTGTTAAAGCCATGGGCGAAGGGTGCGCTCTAGATTTTGCAGGTTGGTTCGATTTTCCTGAGTTCGAAGTCTTAAAGCCGAATCCTATGGAGCTTTACAAAGATTGTAAAACAAGACTCGCTGCTTCCCCACCCAGGCCACTTTAAATCTTATATTTAGTTTTTATATATTTGATCAATAAATAACATATTTATTTATTTTAACGTGTGAATGAATCAATCCATTTATTTTATTCTCTTTATGATCTTTAATCAGATTTATAGACGGTTGAAGGAATTCTCATGATTCTCCATACCTCTTTTAGTCGGCAATTTTAACAGAAGAGGAAAGGAATATGAAATATAAAGGTCTTTGGCAGATCTATAACTTTTTTTAACGAGGATTTTATATAAAATTCAGTAAATATGCTCCACGATCTTGGTAAGTATTACTGTATAGATTGTAGATCTAAAACTTTATATTAGGGGATTGTATAAAATAATTTGAATGTATGGATATATATTTAGTTTATATATTTTTATACGCAATTAGTTAAGTTACAAGCTTTGTTTCCCTTAAAATTTCAATATTATGTTTAATAATTGGTCTTTAGACTTAAAAAAGTTTATATATTACAAATTTCTTGAACTAATAGATTAT ATGACAAAGGGAATTAAAAGGATTGCACCAGCACTGGTGGTGGTTCTTTTATTGGTACTAAATTTGTCAGCCTTCGGTCAACCTTCAATAGTAGACGACGACAACTACATGTCACCCATATGGAATGGATGGATAGACGAAGATAGAGGGATAAATCTAAGACGGTGTATAGTTAGAGTGAAGAGTGAAAAATGTCAAGTGGAAGTTTATAAATATTACTTCAATATAAACAAGAAGGAAGTGGATCTAAGTTGTTGTGTATTTGTTAAAGCCATGGGCGAAGGGTGCGCTCTAGATTTTGCAGGTTGGTTCGATTTTCCTGAGTTCGAAGTCTTAAAGCCGAATCCTATGGAGCTTTACAAAGATTGTAAAACAAGACTCGCTGCTTCCCCACCCAGGCCACTTTAA ATGACAAAGGGAATTAAAAGGATTGCACCAGCACTGGTGGTGGTTCTTTTATTGGTACTAAATTTGTCAGCCTTCGGTCAACCTTCAATAGTAGACGACGACAACTACATGTCACCCATATGGAATGGATGGATAGACGAAGATAGAGGGATAAATCTAAGACGGTGTATAGTTAGAGTGAAGAGTGAAAAATGTCAAGTGGAAGTTTATAAATATTACTTCAATATAAACAAGAAGGAAGTGGATCTAAGTTGTTGTGTATTTGTTAAAGCCATGGGCGAAGGGTGCGCTCTAGATTTTGCAGGTTGGTTCGATTTTCCTGAGTTCGAAGTCTTAAAGCCGAATCCTATGGAGCTTTACAAAGATTGTAAAACAAGACTCGCTGCTTCCCCACCCAGGCCACTTTAA MTKGIKRIAPALVVVLLLVLNLSAFGQPSIVDDDNYMSPIWNGWIDEDRGINLRRCIVRVKSEKCQVEVYKYYFNINKKEVDLSCCVFVKAMGEGCALDFAGWFDFPEFEVLKPNPMELYKDCKTRLAASPPRPL Homology
BLAST of MC04g_new0538 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169 bits (428), Expect = 2.05e-51 Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 0
BLAST of MC04g_new0538 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (403), Expect = 1.79e-47 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MC04g_new0538 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 158 bits (399), Expect = 5.32e-47 Identity = 72/122 (59.02%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of MC04g_new0538 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152 bits (385), Expect = 9.20e-45 Identity = 72/119 (60.50%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of MC04g_new0538 vs. NCBI nr
Match: KAG6575254.1 (hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152 bits (383), Expect = 1.36e-44 Identity = 72/123 (58.54%), Postives = 95/123 (77.24%), Query Frame = 0
BLAST of MC04g_new0538 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1) HSP 1 Score: 159 bits (403), Expect = 8.67e-48 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MC04g_new0538 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1) HSP 1 Score: 158 bits (399), Expect = 2.57e-47 Identity = 72/122 (59.02%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of MC04g_new0538 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1) HSP 1 Score: 152 bits (384), Expect = 6.13e-45 Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 0
BLAST of MC04g_new0538 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1) HSP 1 Score: 141 bits (356), Expect = 1.14e-40 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of MC04g_new0538 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1) HSP 1 Score: 133 bits (334), Expect = 2.74e-37 Identity = 64/116 (55.17%), Postives = 80/116 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|