MC06g0192 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0192
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmini zinc finger
LocationMC06: 1548164 .. 1548367 (+)
RNA-Seq ExpressionMC06g0192
SyntenyMC06g0192
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGTGGTCCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGGTGCCGGGAATTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTAATTTGTGCTGCTTGTAGCTGCCACAGGAATTTTCACAGAAGGGAGGTGGATTCTGAAGTGGTGTTTGAGTATTCCCCTCCAAACTCC

mRNA sequence

TCGGTGGTCCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGGTGCCGGGAATTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTAATTTGTGCTGCTTGTAGCTGCCACAGGAATTTTCACAGAAGGGAGGTGGATTCTGAAGTGGTGTTTGAGTATTCCCCTCCAAACTCC

Coding sequence (CDS)

TCGGTGGTCCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGGTGCCGGGAATTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTAATTTGTGCTGCTTGTAGCTGCCACAGGAATTTTCACAGAAGGGAGGTGGATTCTGAAGTGGTGTTTGAGTATTCCCCTCCAAACTCC

Protein sequence

SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVVFEYSPPNS
Homology
BLAST of MC06g0192 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-26
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0

Query: 1   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
           S VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAAC CHRNFHR+EVD+EVV
Sbjct: 35  SNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVV 94

Query: 61  FEYSPPNS 69
            EYSPPN+
Sbjct: 95  CEYSPPNA 102

BLAST of MC06g0192 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 8.7e-25
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAAC CHRNFHRREVD+EVV
Sbjct: 22 SNVRYVECQKNHAANIGGYAVDGCREFMASGGD---DALTCAACGCHRNFHRREVDTEVV 81

Query: 61 FEYSPPNS 69
           EYSPPN+
Sbjct: 82 CEYSPPNA 86

BLAST of MC06g0192 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.3e-22
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0

Query: 3  VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALICAACSCHRNFHRREVDSEVVF 62
          VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAAC CHR+FHRRE+++EVV 
Sbjct: 31 VRYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREIETEVVC 90

Query: 63 EYSPPNS 69
          + + P S
Sbjct: 91 DCNSPPS 97

BLAST of MC06g0192 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.4e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0

Query: 2  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDS 58
          VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL+CAAC CHR+FHRREV++
Sbjct: 32 VVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEA 87

BLAST of MC06g0192 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.4e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0

Query: 2  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDS 58
          VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL+CAAC CHR+FHRREV++
Sbjct: 32 VVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEA 87

BLAST of MC06g0192 vs. NCBI nr
Match: XP_022135253.1 (mini zinc finger protein 3-like [Momordica charantia])

HSP 1 Score: 147 bits (371), Expect = 2.42e-44
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV
Sbjct: 24 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 83

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 84 FEYSPPNS 91

BLAST of MC06g0192 vs. NCBI nr
Match: XP_038880256.1 (mini zinc finger protein 3 [Benincasa hispida])

HSP 1 Score: 142 bits (357), Expect = 3.52e-42
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 27 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV 86

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 87 FEYSPPNS 94

BLAST of MC06g0192 vs. NCBI nr
Match: XP_022921765.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (354), Expect = 1.01e-41
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 25 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVV 84

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 85 FEYSPPNS 92

BLAST of MC06g0192 vs. NCBI nr
Match: KAG7023191.1 (Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140 bits (354), Expect = 1.01e-41
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 25 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVV 84

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 85 FEYSPPNS 92

BLAST of MC06g0192 vs. NCBI nr
Match: XP_004138166.1 (mini zinc finger protein 3 [Cucumis sativus])

HSP 1 Score: 139 bits (351), Expect = 2.90e-41
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          S VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 27 SEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV 86

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 87 FEYSPPNS 94

BLAST of MC06g0192 vs. ExPASy TrEMBL
Match: A0A6J1C4B2 (mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 1.17e-44
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV
Sbjct: 24 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 83

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 84 FEYSPPNS 91

BLAST of MC06g0192 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 4.89e-42
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 25 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVV 84

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 85 FEYSPPNS 92

BLAST of MC06g0192 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.40e-41
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRR+VD+EVV
Sbjct: 25 SVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRRDVDAEVV 84

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 85 FEYSPPNS 92

BLAST of MC06g0192 vs. ExPASy TrEMBL
Match: A0A0A0LSA6 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009710 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.40e-41
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          S VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 27 SEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV 86

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 87 FEYSPPNS 94

BLAST of MC06g0192 vs. ExPASy TrEMBL
Match: A0A5A7UWS7 (Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002440 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.45e-41
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          S VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD+EVV
Sbjct: 28 SEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV 87

Query: 61 FEYSPPNS 68
          FEYSPPNS
Sbjct: 88 FEYSPPNS 95

BLAST of MC06g0192 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 )

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-27
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0

Query: 1   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
           S VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAAC CHRNFHR+EVD+EVV
Sbjct: 35  SNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVV 94

Query: 61  FEYSPPNS 69
            EYSPPN+
Sbjct: 95  CEYSPPNA 102

BLAST of MC06g0192 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger )

HSP 1 Score: 113.6 bits (283), Expect = 6.2e-26
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 1  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVV 60
          S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAAC CHRNFHRREVD+EVV
Sbjct: 22 SNVRYVECQKNHAANIGGYAVDGCREFMASGGD---DALTCAACGCHRNFHRREVDTEVV 81

Query: 61 FEYSPPNS 69
           EYSPPN+
Sbjct: 82 CEYSPPNA 86

BLAST of MC06g0192 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 )

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-23
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0

Query: 3  VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALICAACSCHRNFHRREVDSEVVF 62
          VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAAC CHR+FHRRE+++EVV 
Sbjct: 31 VRYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREIETEVVC 90

Query: 63 EYSPPNS 69
          + + P S
Sbjct: 91 DCNSPPS 97

BLAST of MC06g0192 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-19
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0

Query: 4   RYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVVFEY 63
           RY ECQKNHAA  GG  VDGC EFM+ GE+GT E+L+CAAC CHR+FHR+E+D   V  +
Sbjct: 81  RYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNF 140

Query: 64  S 65
           +
Sbjct: 141 N 141

BLAST of MC06g0192 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 )

HSP 1 Score: 91.3 bits (225), Expect = 3.3e-19
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0

Query: 2   VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALICAACSCHRNFHRREVDSEVVF 61
           V++Y EC KNHAA +GG A+DGC EFM  GE+G+ EAL C+ C+CHRNFHRRE + E   
Sbjct: 84  VIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKT 143

Query: 62  EYSP 66
            +SP
Sbjct: 144 FFSP 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9CA512.1e-2676.47Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1[more]
Q2Q4938.7e-2576.47Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1[more]
Q9LJW55.3e-2270.15Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1[more]
B8BIU86.4e-2073.21Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 S... [more]
Q2RB286.4e-2073.21Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3... [more]
Match NameE-valueIdentityDescription
XP_022135253.12.42e-44100.00mini zinc finger protein 3-like [Momordica charantia][more]
XP_038880256.13.52e-4295.59mini zinc finger protein 3 [Benincasa hispida][more]
XP_022921765.11.01e-4194.12mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc fin... [more]
KAG7023191.11.01e-4194.12Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_004138166.12.90e-4194.12mini zinc finger protein 3 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1C4B21.17e-44100.00mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 P... [more]
A0A6J1E6Q94.89e-4294.12mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE... [more]
A0A6J1J9R51.40e-4192.65mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4... [more]
A0A0A0LSA61.40e-4194.12ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=... [more]
A0A5A7UWS71.45e-4194.12Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
AT1G74660.11.5e-2776.47mini zinc finger 1 [more]
AT1G18835.16.2e-2676.47mini zinc finger [more]
AT3G28917.13.7e-2370.15mini zinc finger 2 [more]
AT2G18350.11.1e-1962.30homeobox protein 24 [more]
AT2G02540.13.3e-1959.38homeobox protein 21 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 4..55
e-value: 1.4E-26
score: 90.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 3..55
e-value: 1.8E-29
score: 101.8
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 5..54
score: 25.18655
NoneNo IPR availablePANTHERPTHR31948ZINC-FINGER HOMEODOMAIN PROTEIN 2coord: 1..67
NoneNo IPR availablePANTHERPTHR31948:SF107MINI ZINC FINGER PROTEIN 3coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0192.1MC06g0192.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000976 transcription cis-regulatory region binding