MC06g0227 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTGAATAGAGCCATTAGGTGAATTGAAGTTCATTTTAATCCGATTAAAGAACATTAGTCTGCAATTGTACTCGAATGGCTTTGGCAATCGCATTCTCTTTTCCCTTTTAGCTTCTGTGAGCAACAACACTGTGTGTTTGGACCCTGTATATTTTGGGGTAAAATCGTGCAACTCTTCATATGGGCTTAACGTGTTCTAACTTCTAAGACTATCTGAGTAGAGAAATTGAAGTTCTTGGTGTCTGTCACGCGCCTACTAGTTAGCAAGGGCAGAAACAGCATTGGCTAGAATACACGAAGTGGGCCACTCTCATTGATGCCATCGTTTACATTACCCTCTGAAAAGTCACTGCTACCTTTATTTTGTATAGATTATACCCCTCCACTTAAGGGTTTTTTACATTTCCACTCCCACACACACTCTCTCCCTTCCTCTCTCTCTCTCTTTCTGTGTGTGTGTGTGTGGTAGTGAGAGCCTCCTTCTGGCCACCATCTCTGAGCTTTGTAATCATGTCTAGTGTTATGGCTGTTTTGGCTATTGGGCTCCTTATTCTGGCCATGACTGGCCATTCAGGTAAGCTCCCCTGCATTTTCATGTCTCTTGTTCTCTACTTTTGTAGTGTAGAACCAAAGATATGTGCTGGTTTTTTTTATTATTTCTCCCTGTAGTTTGACTTCTCATGAATCTTTTTGCTGATTCGAACATTTTGCTTGTGAGCCATTTTTGAAGGCTGTTTAAAAATGTTCCCAATGTGCATTTGACCCTCTTTTCAGAAATGTATTCAATACATCTTCTAGTTTTGGTTCACCTTTATGCAGTTATTTCCCTTTTGTTTGAAAAGAGAGATCTTTATTTTTTCAGTTTGAAATTTGTTGTTCTTTTTGGATGAGTAAGGGGTATAATATTTCTGCGAGTTTCCAGTACTTCTAGAGTTTCTTGTAGATGTCTAGATCTCGTTGGATTTGGTTTATTTTCTTCTGTTTCCTCCACAGTACTTTGTTCCTTCTGGCTCTCTCTTGAAATGCTGGTTTCTGGAACTTGTAGGCGCAACATGGTGCATTTGCAAGGACGGAGTGAGTGATGCAGCTCTTCAGAAAACACTGGACTATGCGTGTGGAGCTGGGGCTGACTGTGTCCCTACTCATCAAAATGGGGGCTGTTTCCTTCCCAATACTGTCAAGGCACACTGTTCCTTCGCCACCAATAGCTACTTTCAGAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTCTCTGGCACAGCAACGATCACTACTACTGACCCCAGTAAGATTTAGCTGTCTACCTCCACATGTTTTTCTCTAGTTCCCTCCACTGTAAGAGAAGATTTAGTTAGTTGAGATCTGAATAATTTCGAGAGAGGAAAAATGGAAAAAAACCCTTCTCGGACTTAACTAGGATTCTAGTTATAGGCCAGAAATTCTAACCTTTTTGGCAATCTATCTGAGGTATCGAATCAAAGCTCCTTACCCATCTATTTCAGCTACCAAATTAAATATATATATATATGTCTTGGTTCAACTACCTGAAGCTTAAATGTTACTGTAGCATAAGCATGATGTGGTAATCTTCAGTAACGAGTGAATGAAATCTGATTTCCATTGTTATTTCTTGGTTTTTTTTTCCTTCTTTTCAGGTGTTGCAGGTTGCGCTTATCCTTCCAGCGCTAGGTATGGTTCTGTATCTACCTTCACTATGTTTTTTTGAAACAAATAGAAAGGTATGAATAGTAAAATTTATTCCCATTTCTGTTTATGGCAATCGCTTTATTAGAATAAAGTTTTCTCAATTCTCAGATTCATTCCAAATCCAAGAATGAATTCTGAATCTGGAGGACAATGACATTCCCTCCAGAGTCAGTGAGATTGAAAATCTCATTCTTACGTTCTCATTTCGTGAACTCCATCTCTTTGAAATGAAATAAAATTATGGTTAGTTTTATTCTTCCTCTTGTATCGACTACAATCTCGTACATTAGTAAAAGGTTTACGATATTTTACTTCATTTGATGTTTTATTTTCATTTGAACAAACACTGAGCCTTTTTACTTGAATAGGAGCAGAGCGTCTTGTTAATTAAAAACTCAAAACACAATTTCCATGATGGCCACCTACCTTAGGAATTAGCAATTCCTATGTGTTTCCTGGCACCAAATGTTGTGGGATCAGGCGGTTGCCGCGTGAGATTAGTCGAGGTGTGCGTAAGCTGGTCCGGACACTCACAGATATCAAAAAAATAAAAAAAAAAATTTAAAAATTAGAAACTCAACAACAAAAATCAAAGTTAACTCTCGATAATCATAGATACTGTAGGAAAAGAGACTTTTGCCATTAGATTCGCCATCATCCCATTGTGGTGTAATAATTGATACTCTTTTTGTCAATTGACTATTTTGTAATTTCATGACCATTTTTCTGGCTTCTTCGCTTACATTACCGTTTTTCAAACTTTCACTTTCACCCAAGAGGTTATAATTGTGACTCCCATGGTTATCTTTTAACACATAATTACCCCTTATCAGTAAGTAGACAAATTTTGTTAAAAAAAATTATGCCGGGCTGAAAATGGAGCCTTTCTTTGGTAATTTGCATCTGATTTATCATTTATGTTGCGTCATTGAGATGGGAAATTATCGAGATTTGAGCCAACATTTTAATGCCTCGAAAGGGAAGCCCAGACTGACCATAATTTTTGGAGAAAAGGATGAAGGTTGCTGAAGTAGTTTGTTTTCTCGAGGAAGAACTGTTGTCTTTTCTCTTGGAGCTAATTTGAAATGTTCTTGTCAAAAACTGGTTATTGTGTGAGGTTATTTTTACAGGTAGAAAGAATGAGATGAATCTTTAGATCCCTCATTGCTTATGCATGATCAACAAATGATGACAACTTTTCTTCTCTTCATAAAGAGGTAGAAAATGAAAAGCTAGTTTATCCAAAACAAGGCCTTAACTTTATTAGTGAATCCAAACCCTTTTTCTAATGAGTTTTCTGTTTTCATAAAGTGGGATTCATTTCATTTTGGTAAATCTGTTGTTGCAGCCCTGTAAGCAGTGGCACCATTCCAGTAGGAGGAACTCCAACCACCACCAACCCAGGATTGACTCCCACAACCAACACTCCCATGGGTGGTTCGGCAACGCCCACCGGTGTCCTAGGCGGGAACGGGAACGGGTTCGGTGGCGGCAGCAACAGCCTAGGGCCATCGGGGGTCGGCGGGATGAGCACCGACTACAGCGACAGTGGATCAAGGCTCCAACTCACCCTCATTGGCAATGTAGCTATTTTTTTCTTCACTCTCTTGTGTGTTGGGCGTATGTTTTGATGGAGCTGTGGTGGCTTTAGTTGATAATGGGTGAGGTTGGTAAAGGGTCAGATTGGATTCGAAAATGTAGGGTGGCTCGCATGTGATGTTCCTGTTCTTGCTGTACTCGTTTTGCTCTTAGACAGCTTTGCTTTGTTTGTTTGTTCTTTCCCCACCCCTCCACACTCTTTCCCACTTGGTAAGAAAAGAAAAAAAGTTGGGCTTCTCATCCTTTTTGGATGGATTTTCTTGCTCCAGTGGGACCCACAGAATACTCTCTCTTTCTTTCTCTGTGTATGTTTTTTAATATTGCATTTAGGTGCGGGAATTTAAACCTATGATCATTTAGAAAACGGTTGGGATGCAGATTTGATATAAGTCTCAAAATGTTGAATTTGAGAATTCAAATGGAACGTGGTCTAGGAGGCTTGAGTTTACGAAAATTGTGGGAATGAGTGTGTCTGGACTCTGGAGAGACGAGTAGGTTTGGAGTACGTGATAAGTTTGTCCAACAAACTCTCACGAGCAAATCTATACTCTTCTGCAAGCACTCTTACTTAAGTATGCTGCGTTTTGTTCGATCTAAGATGGTCATGTTTATTGAGTTTTCCCCTGCAAAATTGAATGATTTGATGTATGATTATTTAAGTATTATAATTACAAGTCGTGAGGAATCGTTTTCAAG GTTCTGAATAGAGCCATTAGGTGAATTGAAGTTCATTTTAATCCGATTAAAGAACATTAGTCTGCAATTGTACTCGAATGGCTTTGGCAATCGCATTCTCTTTTCCCTTTTAGCTTCTGTGAGCAACAACACTGTGTGTTTGGACCCTGTATATTTTGGGGTAAAATCGTGCAACTCTTCATATGGGCTTAACGTGTTCTAACTTCTAAGACTATCTGAGTAGAGAAATTGAAGTTCTTGGTGTCTGTCACGCGCCTACTAGTTAGCAAGGGCAGAAACAGCATTGGCTAGAATACACGAAGTGGGCCACTCTCATTGATGCCATCGTTTACATTACCCTCTGAAAAGTCACTGCTACCTTTATTTTGTATAGATTATACCCCTCCACTTAAGGGTTTTTTACATTTCCACTCCCACACACACTCTCTCCCTTCCTCTCTCTCTCTCTTTCTGTGTGTGTGTGTGTGGTAGTGAGAGCCTCCTTCTGGCCACCATCTCTGAGCTTTGTAATCATGTCTAGTGTTATGGCTGTTTTGGCTATTGGGCTCCTTATTCTGGCCATGACTGGCCATTCAGGCGCAACATGGTGCATTTGCAAGGACGGAGTGAGTGATGCAGCTCTTCAGAAAACACTGGACTATGCGTGTGGAGCTGGGGCTGACTGTGTCCCTACTCATCAAAATGGGGGCTGTTTCCTTCCCAATACTGTCAAGGCACACTGTTCCTTCGCCACCAATAGCTACTTTCAGAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTCTCTGGCACAGCAACGATCACTACTACTGACCCCAGTGTTGCAGGTTGCGCTTATCCTTCCAGCGCTAGCCCTGTAAGCAGTGGCACCATTCCAGTAGGAGGAACTCCAACCACCACCAACCCAGGATTGACTCCCACAACCAACACTCCCATGGGTGGTTCGGCAACGCCCACCGGTGTCCTAGGCGGGAACGGGAACGGGTTCGGTGGCGGCAGCAACAGCCTAGGGCCATCGGGGGTCGGCGGGATGAGCACCGACTACAGCGACAGTGGATCAAGGCTCCAACTCACCCTCATTGGCAATGTAGCTATTTTTTTCTTCACTCTCTTGTGTGTTGGGCGTATGTTTTGATGGAGCTGTGGTGGCTTTAGTTGATAATGGGTGAGGTTGGTAAAGGGTCAGATTGGATTCGAAAATGTAGGGTGGCTCGCATGTGATGTTCCTGTTCTTGCTGTACTCGTTTTGCTCTTAGACAGCTTTGCTTTGTTTGTTTGTTCTTTCCCCACCCCTCCACACTCTTTCCCACTTGGTAAGAAAAGAAAAAAAGTTGGGCTTCTCATCCTTTTTGGATGGATTTTCTTGCTCCAGTGGGACCCACAGAATACTCTCTCTTTCTTTCTCTGTGTATGTTTTTTAATATTGCATTTAGGTGCGGGAATTTAAACCTATGATCATTTAGAAAACGGTTGGGATGCAGATTTGATATAAGTCTCAAAATGTTGAATTTGAGAATTCAAATGGAACGTGGTCTAGGAGGCTTGAGTTTACGAAAATTGTGGGAATGAGTGTGTCTGGACTCTGGAGAGACGAGTAGGTTTGGAGTACGTGATAAGTTTGTCCAACAAACTCTCACGAGCAAATCTATACTCTTCTGCAAGCACTCTTACTTAAGTATGCTGCGTTTTGTTCGATCTAAGATGGTCATGTTTATTGAGTTTTCCCCTGCAAAATTGAATGATTTGATGTATGATTATTTAAGTATTATAATTACAAGTCGTGAGGAATCGTTTTCAAG ATGTCTAGTGTTATGGCTGTTTTGGCTATTGGGCTCCTTATTCTGGCCATGACTGGCCATTCAGGCGCAACATGGTGCATTTGCAAGGACGGAGTGAGTGATGCAGCTCTTCAGAAAACACTGGACTATGCGTGTGGAGCTGGGGCTGACTGTGTCCCTACTCATCAAAATGGGGGCTGTTTCCTTCCCAATACTGTCAAGGCACACTGTTCCTTCGCCACCAATAGCTACTTTCAGAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTCTCTGGCACAGCAACGATCACTACTACTGACCCCAGTGTTGCAGGTTGCGCTTATCCTTCCAGCGCTAGCCCTGTAAGCAGTGGCACCATTCCAGTAGGAGGAACTCCAACCACCACCAACCCAGGATTGACTCCCACAACCAACACTCCCATGGGTGGTTCGGCAACGCCCACCGGTGTCCTAGGCGGGAACGGGAACGGGTTCGGTGGCGGCAGCAACAGCCTAGGGCCATCGGGGGTCGGCGGGATGAGCACCGACTACAGCGACAGTGGATCAAGGCTCCAACTCACCCTCATTGGCAATGTAGCTATTTTTTTCTTCACTCTCTTGTGTGTTGGGCGTATGTTTTGA MSSVMAVLAIGLLILAMTGHSGATWCICKDGVSDAALQKTLDYACGAGADCVPTHQNGGCFLPNTVKAHCSFATNSYFQRKGQAPGSCDFSGTATITTTDPSVAGCAYPSSASPVSSGTIPVGGTPTTTNPGLTPTTNTPMGGSATPTGVLGGNGNGFGGGSNSLGPSGVGGMSTDYSDSGSRLQLTLIGNVAIFFFTLLCVGRMF Homology
BLAST of MC06g0227 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39 Identity = 99/198 (50.00%), Postives = 131/198 (66.16%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.4e-39 Identity = 95/193 (49.22%), Postives = 123/193 (63.73%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.6e-37 Identity = 101/201 (50.25%), Postives = 124/201 (61.69%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 89/219 (40.64%), Postives = 119/219 (54.34%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.3e-18 Identity = 63/165 (38.18%), Postives = 87/165 (52.73%), Query Frame = 0
BLAST of MC06g0227 vs. NCBI nr
Match: XP_022135125.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]) HSP 1 Score: 397 bits (1021), Expect = 2.39e-139 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of MC06g0227 vs. NCBI nr
Match: XP_038878558.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 317 bits (812), Expect = 1.95e-107 Identity = 168/207 (81.16%), Postives = 181/207 (87.44%), Query Frame = 0
BLAST of MC06g0227 vs. NCBI nr
Match: KAA0057988.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa]) HSP 1 Score: 305 bits (782), Expect = 6.27e-103 Identity = 164/207 (79.23%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of MC06g0227 vs. NCBI nr
Match: XP_022922094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >KAG6589608.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 304 bits (778), Expect = 2.46e-102 Identity = 159/207 (76.81%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of MC06g0227 vs. NCBI nr
Match: XP_004138193.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >KGN63722.1 hypothetical protein Csa_013700 [Cucumis sativus]) HSP 1 Score: 303 bits (777), Expect = 3.50e-102 Identity = 165/207 (79.71%), Postives = 178/207 (85.99%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy TrEMBL
Match: A0A6J1C082 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111007179 PE=4 SV=1) HSP 1 Score: 397 bits (1021), Expect = 1.16e-139 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy TrEMBL
Match: A0A5A7US74 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002920 PE=4 SV=1) HSP 1 Score: 305 bits (782), Expect = 3.04e-103 Identity = 164/207 (79.23%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy TrEMBL
Match: A0A6J1E2D5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430147 PE=4 SV=1) HSP 1 Score: 304 bits (778), Expect = 1.19e-102 Identity = 159/207 (76.81%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy TrEMBL
Match: A0A0A0LSF3 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013210 PE=4 SV=1) HSP 1 Score: 303 bits (777), Expect = 1.69e-102 Identity = 165/207 (79.71%), Postives = 178/207 (85.99%), Query Frame = 0
BLAST of MC06g0227 vs. ExPASy TrEMBL
Match: A0A1S3BVT1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103494037 PE=4 SV=1) HSP 1 Score: 305 bits (782), Expect = 3.11e-102 Identity = 164/207 (79.23%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of MC06g0227 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 162.9 bits (411), Expect = 2.7e-40 Identity = 99/198 (50.00%), Postives = 131/198 (66.16%), Query Frame = 0
BLAST of MC06g0227 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 161.8 bits (408), Expect = 6.0e-40 Identity = 95/193 (49.22%), Postives = 123/193 (63.73%), Query Frame = 0
BLAST of MC06g0227 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 156.0 bits (393), Expect = 3.3e-38 Identity = 101/201 (50.25%), Postives = 124/201 (61.69%), Query Frame = 0
BLAST of MC06g0227 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.9e-31 Identity = 86/198 (43.43%), Postives = 111/198 (56.06%), Query Frame = 0
BLAST of MC06g0227 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 129.0 bits (323), Expect = 4.3e-30 Identity = 87/177 (49.15%), Postives = 105/177 (59.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|