MC01g1606 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1606
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Nuclear transcription factor Y subunit
Location	MC01: 20281816 .. 20290594 (-)
RNA-Seq Expression	MC01g1606
Synteny	MC01g1606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCAGCATATCTCGGACGATGGGGTGTAGCCGCAGGCGATTCCCACTCATGAATCGCATCCACTCACAGAGTGGGCCCCATGAAGTTCCTGGTCTAGATTAGCCACCTCATCATTTCGGTCAGGTCAGTTCTGTGCCCGAACTGCCCGCCCCATTCTCATCGCCGCTCAGGCCCAGGGGCAGCAGCCGAAAAATCAGAATGAGAAACAAATATGCTAATTGGATTTTGAGCTTCAGCTTCCGCTGTCTCCTCAAACTCACAACAGGAAGAACAAAAGACAAAACTCCTCCCTCAACTCTGCCTTGCACCAGAACAACAACGCCTCCTGAATTCCCACTCTCCAGGTCAAGTTTCCATTTTCAAACCCTACTTTCTTTCTTCATCAATTCTCCAACCCATGCATCTGCACTAAGTTAATCTTTATGTTTTTTCCGTTCCTGTGTTTGACGTTTTCTCTTGTTTAATTCGAGAATTATTGTGTGAATATTTTGTGGGTTCGGTTTTTATTTGAAATTGGACAACTATCTGTCTCGTCTGTGTTGATCGAATTGCTTGGACTCGATTATGAGTACGTGGTGAAGTAATCGTTCTTCGGTTTACTGCTCATATGTGATTCCTGGTTTCTTTGTTGGGTGATCATGCACAAAGCATACGTTGTTAACAGTACTGAGATAACTCTGCAATGTCTGGTATAATGGCGACCAAAAGCATTTCACATGTTATGTACGTCAATCTCATCCAAATTGGTGTGCGCCAACCTTCTCGACTTCTGAAAAGACTGAAGTTAATAAGTTTAGCTTGTGGACTTCCTGCATGATGTTTGCCACTCGTGCTGGGTTGATTTCATATGCTCTCATAGTTTACATCTAAACACCGAAAATTTCTATTTACTTGAAAAAGGAAAATACAATCCAGTTGGTCCTGGCTGGTCCTGCTGCTATTTTGGTCATGATGCCATATGAAGGTTACTGGTTTATGTCACCGTTCACCTTTTTTTTTTTTAAATAATTATTTTTATTTAATAATTTCAATTGATATAATGTAAATGAGTTTTGAGGATGTTATTTAACCTTGAATATCCTGAATTCGTGTTGGATAGCTGTGCAATCATCCTGGCATTAGTTAGGGCTTTTTCTTGTATATGCAATATCTGTTGGAGTTAGTTTTGAAATGTGGTCGCCAGACCTTGGTCATACTATTCTATTCCTTGCACCCATTCCGGATATATGTGAACTGTTCCAATATCACCAGGCTGACAGATTTGTTGGCTTTGATGTCAGGTTTCGTTTGGTTTGCACTACAACCCCATGACTTCTTCTGTCCACGATTATTCTGGTAACTTGATCAGACTTGTGTTCATGTGTTAATGGTGTTTATTTTTCAATGTTTGATATTCTATATCATATACTGTCAAAAACTTGAAAAAAAAGAGAGAATGTGTGCAAACTTTTCTGCCTGCTGCTGCAGAAACTATAGTTGCTGTTTCTGTCCTTAAGTTCTCTTATTCGGTTACTTTTGATTTACCTCATGATAGAATGCTCTTTTCACCACTCAAATAGCATCTGTGGTATAGTTTGCTTCTTGAATTATGTATTACATGTTATTTTTTTAAAAGGAAAACAGGACTTTAACTAAGATGAACAAAAGAAAGATATTCGCCTGGCCATGCCAATAGAGATGAACAAAAACTCTCCAATAGGCAACTAATGAAGAGATAGAGTAGTAACAAACAGCTTTTTAGGGGCACTCCAAAAGGAGGCATTAAATGAATTTAAACCCAAAGTTCCCTCTAGGTAAGTTTTTAATTATTATTTTTTTCTTTGAACTCCAACATTCTAAATTATAGCTCAAAAAATATTGATCCACAAAATGCTAGTCTTCTCAAGAAAAGGATGGCTGCATGGCATCTAGACGAAGAACTCTTTTAATTTCTTGGGAGACTATATTAATGTTAAAGCAATTGGAAAGACTCCACTGACTCTGAATCAAGAAACAGGTGCTTGTCATCTTCATTTGTACCCTTGCACGTACTGCATCACCCATTGGATATAGAAAAACCAAATTCCTTTCCTGAATGTTATCATTAGTGTTCAACCCTCCCGAAACAAAGATCACCCAACTCTTTTAGACACTTAAGGTTCCACAAAGTGCTGCACAATCAGAGGGATTGTGAATCAGTATAAGTGATGTCACAAAAAAGAGTTCTACAAGAAAAGTCACCAGATTGATATGTCTTCCATGCTTGAGTGTCATTGGCAAAAGCCAGTAAAACACCTTCTTTGAGATGCATAAAGGCTGTTGATTCTATCGCTTTAAGTTCCTCATTGAGATCAACAGCTAGAAATATTTCTTTTCTGTCAGCTAATGCATAAATTCTTGGAAAAGGCCAAGAAGCCTTTCCTCCACACTTAGTTTAACTCTATCGGAAGTTTCATTTAGCAATTGAAACCCATGGATTTTGTTGGCTGGTATTCTGTTTTCCAACAAGGAGAAGTAGATTGACCAAAAGAAGACTTTCTATGCTTGCTTGCATTAATTCTTTGCCATATGGCATCTTTATCATTCAGATTATAGTCTCTAAAGCATTCTTTTTGGGAAGTACCATGAGATCTTTATGTGAGTTCCATTTCTATGTAAGAATATCGTTTGTTTTTTGCTCCATTTTTTTGAATGCGTTTTTCTATATGTACCTCATATTATAGGCTGATTTTTTTGGCCACTTATGTGCTCAATAGAGTTTATGGGCTCGACTGATTGCTTTGTGATATTACAATATTGTCTTTTTACTTCAACTGGGCCTGGATAAATTTTGCTCTGGAAACTGGTTGTCCAGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGTACTATATTCAAACTATTCTCTCTCTCTCTTTTACTTTTCTTAATCCCTTTGTGGAACTTGGTTTGCAAAAGCTCTGCTCAAGCCTTATTATTCATTCATTTGTTTTTTTTTTAATTTCTTTTTCTGAAAAAAGAAACAAATTTTTTGTGAATATAGTAAATAGTTAGAAGTAGGTTGTACGAAGAAAGGAACAGAAAAACTTCCTACTCCCAGGTTATCTTATGATATGGTTTACCATATCAAGAAGGGTTTTTTATATCATTACTATGTTATTACTTTTTTTTTTTTTTTAATGAAACCGTCTACCTTTTGGTAACTTGAAAAATAGTAATGCATATTTTTGTAATATTTTCCTACAGTTTGGTTTGAAAGAAACCGAAATATTTTTTATGGTATTGGAAGGGCTAGAGAGAAATTTTTGAATGATATTTCCTCTTTTCACATCTGATTATTCTAGTATTTCCAAGGTTTTTGGTAACTATTCCATTTCTTCAATTTTAGCCAGTTGGGAAGTACTTTCTTAACCCTTGTTACGGGACTTTTTTCTCCCTTTGTCTCACTTTTTAACGTTTCATTTATGCAATAAAATTGGTTTATCTGGTTTGGATTTTTTTTATCTGATAAATGCTATGAATTACACATGATGTACTTATTATTTACATTTTAAAAGATAAAAAATTCAATATGCAATTTTTATGAACAATAACTATAATTCACAGTAATGCATTTTTAGTCTGAAGTATTTAAAAGTATATAATGTGATAAAATAATTTTCAATAATGTTCTCCTGACGTATGACTCGTCTTGTAAATAAAGTTTCGTGAAAGAAAGTTAATTCACCAAACATATAGAATTAAAATCAATAATTTGAATTTACGTAATTATATATATCTTATTCATTCCTTTATTATGTGGCTTACACACCATAAAGTTTAATTATATATTTTGCACTATATGGTAAAAAATTAAATATGTTATATGTAACGATAAATTTAGCTTCCTATATTAATAGCAAATAATTGCCTTTTCCAGTTTAGAAAATGATATGTATGTTTTTATCAATGCAATTGATAAATATTCCTTTTCTTTTATCCAATTGGTGAAGTTTTTTGTAACTCCCTTGAATTGGGATCCTCCCCACCTTTTATAATTCCACACTATCAATGAAATTGTTTCTTATAAAAAAAATTATATGTATGTTTATCTTGATATTATCTAACCAAGAGTTCTTTCTAAAGCGTAGAGGCACTAGTGCATTTTTCAATAAATAAATTCAGCAGAGGCACACAAAAATAAAAATAAAATTGATAATTTAATATATGATTAACATAGTATCATGAAGCATGGGATAATGGAAAACAAAAGCAATAATGCTTTATTTAGATATTATTCAAAGAAGTAGGCATAGATTCACTTTTGAGAGCAATGCATATAATATAACTAATATATTTTTCTATAAGAATTTCATTATCAAGGAGATCTAGTTACAAAAGAAGGGGAAAAGCAATCTCCAAAGAGCCAACGGTACAAAAAAGACTTTCATTTGGCATTAAAATTCACAACATTGTAGTTACAAAACATCTTGTAAATTAGACACAAAGATGACACAAAGAACGAACTTCCCGAAACACAGTGCCAAAGATTCTTTGCCTTTGAAAACTCTTTGATTCCTTTCAAACCACATTCACTGAACAGTTTATAAAATTTATTATTAGTTACCATTATATAATACGTTATATAACTATTATTAGTTACTAATGTTTATAAAATTTATTATATTACAAGATAAGACACAATGAGAAATGTGATGTGGCATGTTTTTGGTAGTACAGTAGTTTTTGAAAGAGAGCAGGGCTTTTTTGTGTGGGGATCTTAATCCATAGCAATTGCTGAAGTCCGATGGCTTAAGTTTCATGTCCTTGCATGCGTGCTTGGAGGTTGGGGGACTTCTTGTGGACTTCATCTAGTTTTTCACTCTCTCGCTCTCTCCCTATATATATAATAAAAAATGGAATAAGAAACGAACAATTTTCAGCGAGAGCCCGACTTCTCCAAAGCTAAGCCTCCCGCCATTATCTATTTAAAAAAAAAAGTGTTGTGGACCTTATCTAACCTAGGAATATGGTTTCGTTGTTTTTGGCTCCTGTAAAATTATTTCCCTAGTCTGCTCTTTTATTAATGAAGCTTCAGAATGATTTCACTTTATCTTCTTTTGTAAGTGCCATTAGTATCGCATCCTACCCTCTGCTTCAATTTTTTAATATCCGAAAGACCTTGCTAGAAACAGAAGTGTGTAATTCTGCTCTATTTCTTCTCATTTGCAATTAGTTTTTCTACAGATGTGTAACCAAAATACATACAATATGATTGACATTCAAACAATTCTTGTCAGTTGCAATCTGAATGTGGAAACTGTATACTTAGTAACAAAGTTTCGGTGGATGCAGTGTTAATTCTAAGCCTAATGTAGGAAGTGGGTAATTATGACCAGGTTTTTGTAGAGACGTGTATGTTTTAGGGAGGGTGTCATGAGAGAGAGAGAGAGCCTACTTTCATTTGGCAGTATATTCATAATCAGTTCCTGTTCTACTTCTAGAGGATTGTATTCACTTCTAGTTATATAAAGATGGATGGTTGATAGAAATCATGTTTTGCCTTTAATCCACCTAATTTATGCATGATGTAACGTTTCACTTTAGTCACTGTCACTTTCCACCGGAGACAATGATCTTTCATCTACCCTAATATGAGCATAATTTGATATGTTCTTGATCTTGGCCATACTCACCATAATTTGTGTTTAAATAAATGAATTCTTGGTCTCTGTCCACGGGAAACAAAAGTTGGTGAGATTGAGAGTTTTTTCTGACCATTATAATGGTTGGGACAGTTGCTGATTTTAATTGGACATTTGCAGTTATGATGGTGTTTTTTTAAGTGGTTGTTTCCCTTTTCTAGACAAAGAATCTAGTTTTTAGTTTTACTATTTGTTATTAATGGCTTTATTTAGAGCTTATTTAACTAATTTGGATTTCTGGAACTTCTCTGGTGAAGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTGGTTTTTTATTTTTCAATAATGTCAATAATTTTGGCTGACATTTTGAATAGAGACATCAAGTAATGTTGGTGAGAATTGATCAAGGAATGGTAAACCTTCCTCCTTTGGAGAACGTTGAATTTTTCTGTTCAAAATTTTTGACCCTACAGGCTGGGGGTAGAGGGTACCCCGCCTGAAAAACTACAATTGTCTGTTTCTTATAATATTTTTTTATAAAGAGAGCGATTTTATCTTTCCTATCATGTTCTCCCTGAAAAAGAAGAGGTAAAAAAACCAGAAAAATAGTTTATAAAGAGAACACTAAATGGGAGTAAAGAATTTGGTGCATTTTTTTTCCTCTTTAAAGATCACAATTGTTGATTCTAATGAAAAACAGGAATCGTGAAAGAGTCCTCTTTGAATAAAATTATAGAAGCAACATACAGCCTGGAAGGGTATAATTATTTTGTTAACTTTGGAGAATACGATAACTCGCTGTAGATACATGGATCGTAGGCTTTCTAAAACCATAAAGAAATGAAAGCTTAATTTATCAGATTATTTTATCTATATGATTTATAACTTGCTGATTTTGATATATTGGTTTGTTTTACCTTTTTTAGTCATTACTTGATTTCTTGTGTATTCTCATTTTAGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGGTATGCAAGCACAACTATTACCCCAGTGTTAAATACTGCGTGTGCATAATTGTATTTGTGATAGGCCTCCCGTAGTATATACTATAAAAGAAGGGGGAAAAATGGTCTAGGTAGGTGTCTAGGGGGAAAAATGGTATAGGTAGGTGTCAGGTAGTTAGACGAAAGAGCTGATTCTGTTAATTGAAGTGTGACGTGAGATGAAGTATTAGCATTGTACTAAGTGGTGGTAGTTGTGGTAGTCCTCCCCACCCTTTTTACTCTTTCTATCAGAAGTTCAGAACCTATCAAATTGGGGAGGGGGGTGGGTGGTGAGAAAGACTTCTTGGTTAGCTTTCCTTTCATGTTGCTTCATTCTTTGGATTTTGACTGCTTAGCTTCAATATATTGTGCAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGATGTATGGGAGATTGTTGATGAAAGGTGAATGACGCTTGTCAACAATTATAAGGAAATTGAGGTCTCAATACCAGCTTTGGTTGTCTTAGTATTACTTCACTCAGTCTATACTAGCAGCATTGTAGCATATAGGTTTCAGTAGCACATGTTACTTAGGGAGGATCCAGAATGTAGCAGGCAAAATTATGCTAGATTTTATACCATCTCAAATACTGAAGTGAGTAAGCCGATTGTTCTGTTTGAATGGTTGCATTAGGTTGGCAAATATTAGATTCACTGTTTTGTAGTATTAGTGCTATTTACGTTGCTCCCCACCTAAAAAATAAGTTAAATGGTTGAATTGAAATGATGGAACTAGTAATGTAACATATTGATCCTAGCAGTATTTTCTTTTATTTTCCTTTTTCTTTTGTGTGTTTTGAAATGGCAGTGTTCTAGCTTTTGCTGAGAGAAAAGGTAAACACTTTTCCTTGGCCAATTTAGTTGTAAGGATCCCCATCAACATATTAGCTGAAAAAGACAACAAAATCCGTTTCAAAGAGCAGCCGTACACTCAAATTCCCCAATTTTGAAGCCTAGTATTTGAAATAGCTGCAACAGATTGGCACAGTACATATTAAAGCTGATCTACCTGAAACTTTTGTGGGAAGCATTTTAATGGAAGGAAAGGAGATGGGGCGACGAGATGGTCAGGTCTGGGTTGTATTGAATGTACAAAAAGAATAAACATTCGTAGTGTTTGGTCGTGTTCTAGGAATAAAAGGAGTGTAGGCAAGTTGATAAAGCATCTCGATATCAATCTTCAAAATTACAGCAGAAAATAATAGATTCAACCTTCTACTGCTGGATATTTTGAACCTGTAAATAACGAGACAGTGATGACCACACAGTAGTGTGCAACTGTATTATAACTTCTCCAACAACTTCTGTTTACTAAACACTGCAGGGAACTACCCGGAACATCTTTTGGGACAGGTGTGCCAACTTTGTCCATATCTTGCTCTATTTTTCATGTTGTAATATATCCTACGCTTCATTCAAGCTAGGTTGCTTCTACTATGTATCTTTCACTTGAGCTAAGGGAATTTAGAACTTGCATTCCCATTCTTTGGTTTCATCAAACTTTATCTCATTTCCTTCAAGTGCTCACTGTATTATATCAATGGTTGATAATCTGACCAAGCAGTAACTTTGTTTAGCCTGACCTTGAGCTGTCTGAATTACAAATTCATATCAGCTCCTTCTAAAGTGGATCCATTGGCC

mRNA sequence

GGAGCAGCATATCTCGGACGATGGGGTGTAGCCGCAGGCGATTCCCACTCATGAATCGCATCCACTCACAGAGTGGGCCCCATGAAGTTCCTGGTCTAGATTAGCCACCTCATCATTTCGGTCAGGTCAGTTCTGTGCCCGAACTGCCCGCCCCATTCTCATCGCCGCTCAGGCCCAGGGGCAGCAGCCGAAAAATCAGAATGAGAAACAAATATGCTAATTGGATTTTGAGCTTCAGCTTCCGCTGTCTCCTCAAACTCACAACAGGAAGAACAAAAGACAAAACTCCTCCCTCAACTCTGCCTTGCACCAGAACAACAACGCCTCCTGAATTCCCACTCTCCAGGTTTCGTTTGGTTTGCACTACAACCCCATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGATGTATGGGAGATTGTTGATGAAAGGTGAATGACGCTTGTCAACAATTATAAGGAAATTGAGGTCTCAATACCAGCTTTGGTTGTCTTAGTATTACTTCACTCAGTCTATACTAGCAGCATTGTAGCATATAGGTTTCAGTAGCACATGTTACTTAGGGAGGATCCAGAATGTAGCAGGCAAAATTATGCTAGATTTTATACCATCTCAAATACTGAAGTGAGTAAGCCGATTGTTCTGTTTGAATGGTTGCATTAGGTTGGCAAATATTAGATTCACTGTTTTGTAGTATTAGTGCTATTTACGTTGCTCCCCACCTAAAAAATAAGTTAAATGGTTGAATTGAAATGATGGAACTAGTAATGTAACATATTGATCCTAGCAGTATTTTCTTTTATTTTCCTTTTTCTTTTGTGTGTTTTGAAATGGCAGTGTTCTAGCTTTTGCTGAGAGAAAAGGTAAACACTTTTCCTTGGCCAATTTAGTTGTAAGGATCCCCATCAACATATTAGCTGAAAAAGACAACAAAATCCGTTTCAAAGAGCAGCCGTACACTCAAATTCCCCAATTTTGAAGCCTAGTATTTGAAATAGCTGCAACAGATTGGCACAGTACATATTAAAGCTGATCTACCTGAAACTTTTGTGGGAAGCATTTTAATGGAAGGAAAGGAGATGGGGCGACGAGATGGTCAGGTCTGGGTTGTATTGAATGTACAAAAAGAATAAACATTCGTAGTGTTTGGTCGTGTTCTAGGAATAAAAGGAGTGTAGGCAAGTTGATAAAGCATCTCGATATCAATCTTCAAAATTACAGCAGAAAATAATAGATTCAACCTTCTACTGCTGGATATTTTGAACCTGTAAATAACGAGACAGTGATGACCACACAGTAGTGTGCAACTGTATTATAACTTCTCCAACAACTTCTGTTTACTAAACACTGCAGGGAACTACCCGGAACATCTTTTGGGACAGGTGTGCCAACTTTGTCCATATCTTGCTCTATTTTTCATGTTGTAATATATCCTACGCTTCATTCAAGCTAGGTTGCTTCTACTATGTATCTTTCACTTGAGCTAAGGGAATTTAGAACTTGCATTCCCATTCTTTGGTTTCATCAAACTTTATCTCATTTCCTTCAAGTGCTCACTGTATTATATCAATGGTTGATAATCTGACCAAGCAGTAACTTTGTTTAGCCTGACCTTGAGCTGTCTGAATTACAAATTCATATCAGCTCCTTCTAAAGTGGATCCATTGGCC

Coding sequence (CDS)

ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGA

Protein sequence

MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNEVASGGKSQPNINLNSDKSDLASSEN

Homology

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BLAST of MC01g1606 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49
Identity = 119/203 (58.62%), Postives = 146/203 (71.92%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  SI T   Y  P   G  ++MAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + KKE++ +E
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNA-KKEDEHHE 180

Query: 181 VASGGKSQPNINLNSDKSDLASS 204
            +S    +   NL++ KS +A+S
Sbjct: 181 DSS---HEEKSNLSAGKSAMAAS 186

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BLAST of MC01g1606 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.3e-43
Identity = 111/208 (53.37%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVH+ SDN E+  +++  +SQ     V +G +  SI T + Y  P        MA  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTRP-QVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKEN---- 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + KKEN    
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNA-KKENGDHK 180

Query: 181 -QQNEVASGGKSQPNINLNSDKSDLASS 204
            ++   +    S+ + +L S+K  +A+S
Sbjct: 181 EEEEATSDENTSEASSSLRSEKLAMATS 192

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BLAST of MC01g1606 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 81/184 (44.02%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 20  YSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMA-PPAYPYPDPYYRSIFTPYDA 79
           YS+    SL   +G+ QP  P   Q V       GH +    + PY DPYY  +   Y  
Sbjct: 93  YSDKNQESLH--HGITQP--PPHPQLV-------GHTVGWASSNPYQDPYYAGVMGAYGH 152

Query: 80  QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESE 139
            P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E
Sbjct: 153 HPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELE 212

Query: 140 NKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKE---NQQNEVASGGKSQPNINLNS 199
            K +KSRKPYLHESRH HA+RR RG GGRF K    E    +  E ++G  +Q   + NS
Sbjct: 213 KKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNS 255

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BLAST of MC01g1606 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 3   SSVHDYSDNGEADEQQKYSESQNHSLSVIN-GL--NQPSIPTPNQY----VTPPQVGAGH 62
           S+  D + NGE D   K S++   S SV N G+  N P++   N +    V PP++  GH
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPEL-VGH 125

Query: 63  AMAPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 122
            +A    PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV
Sbjct: 126 YIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPV 185

Query: 123 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKE 182
           +VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K E
Sbjct: 186 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSE 245

Query: 183 NQQNEVASGGKSQPNINLNSDKSDLASSEN 206
            +  E A G   +     NS  S+   +++
Sbjct: 246 VEAGEDAGGRDRERGSATNSSGSEQVETDS 262

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BLAST of MC01g1606 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 71  SIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRR 130
           S F  + A  Y   P     + HL++MG+  + VPLP    E EP+FVNAKQYH ILRRR
Sbjct: 138 SHFNGFLAPEYASTP---TALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRR 197

Query: 131 QSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNEVAS 184
           + RAK E++NK +K RKPYLHESRHLHAL+RARG GGRFL + K +   N + S
Sbjct: 198 KHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCS 248

[Close]

BLAST of MC01g1606 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia])

HSP 1 Score: 398 bits (1023), Expect = 1.10e-139
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASGGKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374 bits (959), Expect = 6.27e-130
Identity = 192/205 (93.66%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. NCBI nr
Match: KAG6581472.1 (Nuclear transcription factor Y subunit A-7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034763.1 Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372 bits (955), Expect = 2.55e-129
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. NCBI nr
Match: XP_022977923.1 (nuclear transcription factor Y subunit A-7 [Cucurbita maxima] >XP_022977924.1 nuclear transcription factor Y subunit A-7 [Cucurbita maxima])

HSP 1 Score: 372 bits (954), Expect = 3.63e-129
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHD+SDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. NCBI nr
Match: XP_038883162.1 (nuclear transcription factor Y subunit A-7-like [Benincasa hispida])

HSP 1 Score: 370 bits (949), Expect = 2.10e-128
Identity = 192/205 (93.66%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDN EADEQQKYSESQNHS SVINGLNQPSI TPNQYVT  Q+GAGHAMAP 
Sbjct: 1   MTSSVHDYSDNAEADEQQKYSESQNHSSSVINGLNQPSIATPNQYVTSTQIGAGHAMAPA 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPY+ QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYEPQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 5.31e-140
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASGGKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1)

HSP 1 Score: 374 bits (959), Expect = 3.04e-130
Identity = 192/205 (93.66%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. ExPASy TrEMBL
Match: A0A6J1IRJ2 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111478068 PE=3 SV=1)

HSP 1 Score: 372 bits (954), Expect = 1.76e-129
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHD+SDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of MC01g1606 vs. ExPASy TrEMBL
Match: A0A5D3CPM7 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009570 PE=3 SV=1)

HSP 1 Score: 368 bits (945), Expect = 3.72e-128
Identity = 192/205 (93.66%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEADEQ+KYSESQNHS SVINGLNQP   TPNQYV  PQVGAGH+M PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQP---TPNQYVASPQVGAGHSMVPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of MC01g1606 vs. ExPASy TrEMBL
Match: A0A1S4DTP4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103484315 PE=3 SV=1)

HSP 1 Score: 368 bits (944), Expect = 5.28e-128
Identity = 192/205 (93.66%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVHDYSDNGEADEQ+KYSESQNHS SVINGLNQP   TPNQYV  PQVGAGH+M PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQP---TPNQYVASPQVGAGHSMVPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKXENHQNE 180

Query: 181 VASGGKSQPNINLNSDKSDLASSEN 205
           VASG KSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of MC01g1606 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 119/203 (58.62%), Postives = 146/203 (71.92%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  SI T   Y  P   G  ++MAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + KKE++ +E
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNA-KKEDEHHE 180

Query: 181 VASGGKSQPNINLNSDKSDLASS 204
            +S    +   NL++ KS +A+S
Sbjct: 181 DSS---HEEKSNLSAGKSAMAAS 186

[Close]

BLAST of MC01g1606 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 115/203 (56.65%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  SI T   Y  P   G  ++MAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRSIF P      PPQPY G       LMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG-------LMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + KKE++ +E
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNA-KKEDEHHE 180

Query: 181 VASGGKSQPNINLNSDKSDLASS 204
            +S    +   NL++ KS +A+S
Sbjct: 181 DSS---HEEKSNLSAGKSAMAAS 182

[Close]

BLAST of MC01g1606 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 )

HSP 1 Score: 176.0 bits (445), Expect = 3.1e-44
Identity = 111/208 (53.37%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60
           MTSSVH+ SDN E+  +++  +SQ     V +G +  SI T + Y  P        MA  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTRP-QVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKEN---- 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + KKEN    
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNA-KKENGDHK 180

Query: 181 -QQNEVASGGKSQPNINLNSDKSDLASS 204
            ++   +    S+ + +L S+K  +A+S
Sbjct: 181 EEEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of MC01g1606 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-26
Identity = 81/184 (44.02%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 20  YSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMA-PPAYPYPDPYYRSIFTPYDA 79
           YS+    SL   +G+ QP  P   Q V       GH +    + PY DPYY  +   Y  
Sbjct: 93  YSDKNQESLH--HGITQP--PPHPQLV-------GHTVGWASSNPYQDPYYAGVMGAYGH 152

Query: 80  QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESE 139
            P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E
Sbjct: 153 HPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELE 212

Query: 140 NKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKE---NQQNEVASGGKSQPNINLNS 199
            K +KSRKPYLHESRH HA+RR RG GGRF K    E    +  E ++G  +Q   + NS
Sbjct: 213 KKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNS 255

[Close]

BLAST of MC01g1606 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 3   SSVHDYSDNGEADEQQKYSESQNHSLSVIN-GL--NQPSIPTPNQY----VTPPQVGAGH 62
           S+  D + NGE D   K S++   S SV N G+  N P++   N +    V PP++  GH
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPEL-VGH 125

Query: 63  AMAPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 122
            +A    PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV
Sbjct: 126 YIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPV 185

Query: 123 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKE 182
           +VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K E
Sbjct: 186 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSE 245

Query: 183 NQQNEVASGGKSQPNINLNSDKSDLASSEN 206
            +  E A G   +     NS  S+   +++
Sbjct: 246 VEAGEDAGGRDRERGSATNSSGSEQVETDS 262

The following BLAST results are available for this feature:

BLAST of MC01g1606 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JP1	2.4e-49	58.62	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	4.3e-43	53.37	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	1.2e-24	44.02	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	2.0e-24	41.90	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	1.0e-23	54.39	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of MC01g1606 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146628.1	1.10e-139	100.00	nuclear transcription factor Y subunit A-7 [Momordica charantia]	[more]
XP_022925987.1	6.27e-130	93.66	nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 ...	[more]
KAG6581472.1	2.55e-129	93.17	Nuclear transcription factor Y subunit A-7, partial [Cucurbita argyrosperma subs...	[more]
XP_022977923.1	3.63e-129	93.17	nuclear transcription factor Y subunit A-7 [Cucurbita maxima] >XP_022977924.1 nu...	[more]
XP_038883162.1	2.10e-128	93.66	nuclear transcription factor Y subunit A-7-like [Benincasa hispida]	[more]

BLAST of MC01g1606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ21	5.31e-140	100.00	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1ED47	3.04e-130	93.66	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IRJ2	1.76e-129	93.17	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114780...	[more]
A0A5D3CPM7	3.72e-128	93.66	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DTP4	5.28e-128	93.66	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103484315 P...	[more]

BLAST of MC01g1606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30500.2	1.7e-50	58.62	nuclear factor Y, subunit A7	[more]
AT1G30500.1	1.3e-47	56.65	nuclear factor Y, subunit A7	[more]
AT2G34720.1	3.1e-44	53.37	nuclear factor Y, subunit A4	[more]
AT3G20910.1	8.4e-26	44.02	nuclear factor Y, subunit A9	[more]
AT5G12840.1	1.4e-25	41.90	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 114..136 score: 73.91 coord: 145..168 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 110..171 e-value: 4.2E-35 score: 132.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 113..168 e-value: 4.1E-26 score: 91.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..190
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 111..171 score: 36.842766
None	No IPR available	GENE3D	6.10.250.2430		coord: 111..172 e-value: 2.9E-31 score: 109.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	PANTHER	PTHR12632:SF66	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7	coord: 1..190
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 116..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1606.1	MC01g1606.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity