Tan0017744.1 (mRNA) Snake gourd v1

Overview


Name	Tan0017744.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	translationally-controlled tumor protein homolog
Location	LG09: 8649713 .. 8651924 (-)
Sequence length	920
RNA-Seq Expression	Tan0017744.1
Synteny	Tan0017744.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATCGTAATCCTATTCGGCTTCTTCCTCGTCTGTTCCTATAAATATTCACAGCCTCTTAGCGTTCTCCTTACGCTCTCTTTTTTTCTTGCTTGAGCTTTTCCACTCTCTGTGTTTCTTCTTCTTTCAATTTTCTTCTTCTGCAGCCATGCTCGTCTACCAGGACCAGCTTACAGGTATTCTTCCCTCTTTTCTTTGCTTTTCCAATGCAAATTTTCTCGATTTTTCTCTCTCTTTCGCTCTCATTGTTGCTTCCTATATTTTAGGGTTTTGTAATATGTCAAATTCAGTTTCTAGTTGTGAATTGAGTTTCTAAGTTTGAATGTTTAGTTTCGTTTGATAATCATTTAGTTTCTAGGTGTGAATTGAGTTACTATTAAAACGCGATTTTGAAAATTACCTTTTTTTTTAATTTTTTGTGGTTAAAAAGTGGATAACAAAATAAGGAAACACTAGAATATATGCAAGAGCTTAATTTTTAAAAAAAAAAATAATAATAAAAATAAAATAGCTATCAAACAGGGCTTAAATCTTTGTTACTCCTAGTTTTTGCACATTGGATCCGTTTTTGTAGGATTGTCATTATGGGAAATTTTATTTGAATCCTTCTTTATGTATTGGATTAAGAGTTTGAGTGTTTTTCTATTTTTCAATACTTGGCTTGGTTTTTTTGAAACTCCTATTAATTTTCAAAAACTAAAATCTAAAAATCAAATAGTTATCAGATGGAGTCTTATTGATTTGATTTGCATTATATATTAAAGTTGGTTGGGTTTTGAAAGTGTTGGAGAATATAGGTAGAGATTGGATGATGAATATGGTATTTATTACTTTAGAGCTTTTCTGTGTATTGTTGTTTTAGTTGACTAGACACCATTAATGAACTTGCAGGTGATGAACTTCTGTCAGACTCTTTTCCATACAAGGAAATTGAGAATGGGATGTTGTGGGAAGTAGAAGGAAAGGTAATTAAGGAAACTGTTTTTGTGATATAAAAAAATCAAATTGCATATTAGCTTCTTACTGATCTACAAGTCAATTAATCCAACTAATAATAGATGAAAGTTCATATACTCTCTCTGTGTCTATTTTGGAGTTGTTTCTTGATTTGGATTTCTTTGGGCATTTGGATAACAGTGGGTTGTACAAGGAGCGATCGATGTAGACATCGGGGCGAACCCGTCTGCAGAAGGTGCTGATGAAGATGAAGGTGTAGATGACCAAGCTGTAAAGGTTGTGGATATTGTTGACACCTTTAGACTTCAGGTAAGATACATTTTCATTGGTTCAACTTTAGTGATTGTTCTTCTTCCAGTCTTTCCTTTCAATTGCATCCTAATAGAAGAAGTGTTGGGTATTGGCAGGAACAACCTCCATTTGACAAAAAGCAATTCATCACATACATGAAAAGATTCATCAAGTTGCTAACTCCCAAGTTGGATCAAGAGAAACAAGATTTGTTTAAGAAGCACATTCCAGATGCAACCAAGTACCTTCTTTCCAAGATCAATGACCTCCAATTGTAAGTTTTTAATGCTTACATATCTTAGACGATGATTCTCAGCCAATGGAGTCACCCCTTAGGGACTCTAGGTTTATTTGAACCCGAGCTATTAAAGTTACGGGTTCACTATTTAGCAATAACTTCAAATCAATTATTTGAATAAGTTGAGCTAATCCAACTTGAAAAATTGGGTTGGGTTCAAAAAGTCTCTCGATCCCATCTAAAGACCGACCGACCGACCAACCCATTAGTATGTTCGAAGATCGTGTGTGTTGATAAAATGGCAAGGTTAACTGAAGAGTAATTGTTTTGTGTTTTAATGCAGCTTTGTGGGGGAAGGAATGCATGATGATAGCACTGTGGTATTTGCTTACTACAAAGAAGGAGCAACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCTCTTCTATTTCAACACACACTATACTTTTTCTTTTTTCTTTTTTTGTCTTTTTTTCCTTTGTTTTTATTTTCAAAGTTCTTGTTGCTTGTTTAGACTTGAGAGTTTACATAAAGTTTATGACCCCAAAGGGTAAATATAATATATAATACATGGATTTCCTTTTATCTTAAAATCGTTTGTGACTTTAGTGTAAACATCAATGGAGAGTGATGAAGAATATGCAATTAAAGAATAAAATCACCAAAATTGAATTTTAT

mRNA sequence

AGAATCGTAATCCTATTCGGCTTCTTCCTCGTCTGTTCCTATAAATATTCACAGCCTCTTAGCGTTCTCCTTACGCTCTCTTTTTTTCTTGCTTGAGCTTTTCCACTCTCTGTGTTTCTTCTTCTTTCAATTTTCTTCTTCTGCAGCCATGCTCGTCTACCAGGACCAGCTTACAGGTGATGAACTTCTGTCAGACTCTTTTCCATACAAGGAAATTGAGAATGGGATGTTGTGGGAAGTAGAAGGAAAGTGGGTTGTACAAGGAGCGATCGATGTAGACATCGGGGCGAACCCGTCTGCAGAAGGTGCTGATGAAGATGAAGGTGTAGATGACCAAGCTGTAAAGGTTGTGGATATTGTTGACACCTTTAGACTTCAGGAACAACCTCCATTTGACAAAAAGCAATTCATCACATACATGAAAAGATTCATCAAGTTGCTAACTCCCAAGTTGGATCAAGAGAAACAAGATTTGTTTAAGAAGCACATTCCAGATGCAACCAAGTACCTTCTTTCCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGAATGCATGATGATAGCACTGTGGTATTTGCTTACTACAAAGAAGGAGCAACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCTCTTCTATTTCAACACACACTATACTTTTTCTTTTTTCTTTTTTTGTCTTTTTTTCCTTTGTTTTTATTTTCAAAGTTCTTGTTGCTTGTTTAGACTTGAGAGTTTACATAAAGTTTATGACCCCAAAGGGTAAATATAATATATAATACATGGATTTCCTTTTATCTTAAAATCGTTTGTGACTTTAGTGTAAACATCAATGGAGAGTGATGAAGAATATGCAATTAAAGAATAAAATCACCAAAATTGAATTTTAT

Coding sequence (CDS)

ATGCTCGTCTACCAGGACCAGCTTACAGGTGATGAACTTCTGTCAGACTCTTTTCCATACAAGGAAATTGAGAATGGGATGTTGTGGGAAGTAGAAGGAAAGTGGGTTGTACAAGGAGCGATCGATGTAGACATCGGGGCGAACCCGTCTGCAGAAGGTGCTGATGAAGATGAAGGTGTAGATGACCAAGCTGTAAAGGTTGTGGATATTGTTGACACCTTTAGACTTCAGGAACAACCTCCATTTGACAAAAAGCAATTCATCACATACATGAAAAGATTCATCAAGTTGCTAACTCCCAAGTTGGATCAAGAGAAACAAGATTTGTTTAAGAAGCACATTCCAGATGCAACCAAGTACCTTCTTTCCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGAATGCATGATGATAGCACTGTGGTATTTGCTTACTACAAAGAAGGAGCAACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKYLLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC

Homology

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BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot
Match: Q9ZSW9 (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 GN=TCTP PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-80
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEI NG+LWEVEGKWVVQGA+DVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+TYMKRFIKLLTPKLD+EKQ+ FKK+I  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD ++VFAYY+ GATDPTF+Y AY LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot
Match: Q5J907 (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera OX=51953 GN=TCTP PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.7e-80
Identity = 141/168 (83.93%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEI NGMLWEVEGKWV+QGA++VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+T+MKR+IK LTPKLD EKQ+LFKKHI  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD  +VFAYYK+GATDPTF+Y AYGLKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot
Match: Q944T2 (Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-76
Identity = 140/168 (83.33%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSF YKEIENGMLWEVEGKWVV+GA+DVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DD AVKVVDIVDTFRLQEQP FDKKQF+T+MKRFIK LTPKLD E+Q+LFKKHI  ATKY
Sbjct: 61  DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKI D QFFVGE M DD+ +VFAYYK+GA DPTF+Y AY LKEVKC
Sbjct: 121 LLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot
Match: P35681 (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-76
Identity = 137/168 (81.55%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPY+EIENG+LWEV+GKWVVQGAIDVDIGANPSAEG  +DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+T+MKR+IK L+ KLD EKQ+ FKK+I  ATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL K+ DLQFFVGE MHDD  +VFAYYK+GATDPTF+Y ++GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 5.4e-76
Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEI+NGMLWEV+GKWVVQGA+DV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQP FDKKQF+TY+KR+IK LTPKL+ E Q+ FKK+I  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK+ D QFFVGEGMHDDS +VFAYYK+G+ DPTF+Y+A GLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

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BLAST of Tan0017744.1 vs. NCBI nr
Match: XP_008450611.1 (PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0050911.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa] >TYK10262.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.3 bits (830), Expect = 6.1e-85
Identity = 156/168 (92.86%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKLD+EKQ+LFKK+IP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. NCBI nr
Match: XP_022135588.1 (translationally-controlled tumor protein homolog [Momordica charantia])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 156/168 (92.86%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEIENG+LWEVEGKWVVQGA+DVDIGANPSAEGAD DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADADEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+TYMKR+IKLLTPKLD EKQ+LFKKHI DATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTYMKRYIKLLTPKLDAEKQELFKKHIQDATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKI+DLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKISDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. NCBI nr
Match: XP_038880105.1 (translationally-controlled tumor protein homolog [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 154/168 (91.67%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKL++EK +LFKKHIP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLEEEKLELFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD ++VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGSMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. NCBI nr
Match: XP_004135602.1 (translationally-controlled tumor protein homolog [Cucumis sativus] >KGN66054.1 hypothetical protein Csa_007632 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 154/168 (91.67%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFITYMKR+IKLLTPKLD+EKQ+LF+KHIP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKI+DLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKIDDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. NCBI nr
Match: XP_023531839.1 (translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 150/168 (89.29%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           M+VYQDQLTGDELLSDSFPYKEIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           D++AVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKLD+EKQ++FKKHIP+ATK+
Sbjct: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKINDLQFFVGEGMHDD+ +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL
Match: A0A5D3CG94 (Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004100 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.0e-85
Identity = 156/168 (92.86%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKLD+EKQ+LFKK+IP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL
Match: A0A1S3BQL7 (translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=LOC103492149 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.0e-85
Identity = 156/168 (92.86%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKLD+EKQ+LFKK+IP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL
Match: A0A6J1C579 (translationally-controlled tumor protein homolog OS=Momordica charantia OX=3673 GN=LOC111007510 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.6e-85
Identity = 156/168 (92.86%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEIENG+LWEVEGKWVVQGA+DVDIGANPSAEGAD DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADADEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQPPFDKKQF+TYMKR+IKLLTPKLD EKQ+LFKKHI DATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTYMKRYIKLLTPKLDAEKQELFKKHIQDATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKI+DLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKISDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL
Match: A0A0A0LYG1 (TCTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569310 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 154/168 (91.67%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           ML+YQD LTGDELLSDSFPY EIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFITYMKR+IKLLTPKLD+EKQ+LF+KHIP+ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKI+DLQFFVGEGMHDD T+VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKIDDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL
Match: A0A6J1HY50 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 149/168 (88.69%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           M+VYQDQLTGDELLSDSFPYKEIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           +++AVKVVDIVDTFRLQEQPPFDKKQFITYMKR+IKLLTPKLD+EKQ++FKKHIP+ATK+
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKINDLQFFVGEGMHDD+ +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]

BLAST of Tan0017744.1 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-73
Identity = 131/169 (77.51%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEIENGMLWEVEGKWVV+GA+D DIGANP  EG  EDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGG-EDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DDQAVKVVDI+DTFRLQEQP FDKKQF+ +MKR+IK L+PKLD E Q+LFKKHI  ATK+
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLSKINDLQFFVGEGMH-DDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK+ D QFFVGE M  ++ ++VFAYY+EGATDPTF+Y+AYGLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]

BLAST of Tan0017744.1 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-72
Identity = 129/168 (76.79%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MLVYQDQLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60
           MLVYQD LTGDELLSDSFPYKEIENG+LWEVEGKWV  GA+DV+IGANPSAE   EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRFIKLLTPKLDQEKQDLFKKHIPDATKY 120
           DD   KVVDIVDTFRLQEQP +DKK FI Y+K++IKLLTPKL +E Q +FKK I  ATK+
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDSTVVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL +++D QFFVGEGMHDDST+VFAYYKEG+T+PTF+Y A+GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

The following BLAST results are available for this feature:

BLAST of Tan0017744.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSW9	1.6e-80	85.71	Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 G...	[more]
Q5J907	4.7e-80	83.93	Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tener...	[more]
Q944T2	1.4e-76	83.33	Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP ...	[more]
P35681	1.8e-76	81.55	Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica...	[more]
P43349	5.4e-76	80.36	Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN...	[more]

BLAST of Tan0017744.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450611.1	6.1e-85	92.86	PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0...	[more]
XP_022135588.1	1.8e-84	92.86	translationally-controlled tumor protein homolog [Momordica charantia]	[more]
XP_038880105.1	6.8e-84	91.67	translationally-controlled tumor protein homolog [Benincasa hispida]	[more]
XP_004135602.1	8.8e-84	91.67	translationally-controlled tumor protein homolog [Cucumis sativus] >KGN66054.1 h...	[more]
XP_023531839.1	1.3e-82	89.29	translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0017744.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG94	3.0e-85	92.86	Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuw...	[more]
A0A1S3BQL7	3.0e-85	92.86	translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1C579	8.6e-85	92.86	translationally-controlled tumor protein homolog OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LYG1	4.3e-84	91.67	TCTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569310 PE=3 S...	[more]
A0A6J1HY50	1.8e-82	88.69	translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima ...	[more]

BLAST of Tan0017744.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05540.1	2.0e-73	77.51	Methionine sulfoxide reductase (MSS4-like) family protein	[more]
AT3G16640.1	2.2e-72	76.79	translationally controlled tumor protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018105	Translationally controlled tumour protein	PRINTS	PR01653	TCTPROTEIN	coord: 46..57 score: 68.45 coord: 1..21 score: 63.27 coord: 60..79 score: 60.36
IPR018105	Translationally controlled tumour protein	PFAM	PF00838	TCTP	coord: 1..164 e-value: 7.0E-56 score: 189.1
IPR018105	Translationally controlled tumour protein	PANTHER	PTHR11991	TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED	coord: 1..168
IPR011323	Mss4/translationally controlled tumour-associated TCTP	GENE3D	2.170.150.10	Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	coord: 1..168 e-value: 1.2E-56 score: 193.6
None	No IPR available	PANTHER	PTHR11991:SF11	TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG	coord: 1..168
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01003	TCTP_2	coord: 125..147
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01002	TCTP_1	coord: 45..55
IPR034737	Translationally controlled tumour protein (TCTP) domain	PROSITE	PS51797	TCTP_3	coord: 1..168 score: 57.607666
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 1..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0017744	Tan0017744	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017744.1-three_prime_utr	Tan0017744.1-three_prime_utr-LG09:8649713..8649977	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017744.1-exon	Tan0017744.1-exon-LG09:8649713..8650095	exon
Tan0017744.1-exon	Tan0017744.1-exon-LG09:8650403..8650560	exon
Tan0017744.1-exon	Tan0017744.1-exon-LG09:8650659..8650787	exon
Tan0017744.1-exon	Tan0017744.1-exon-LG09:8650960..8651033	exon
Tan0017744.1-exon	Tan0017744.1-exon-LG09:8651749..8651924	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017744.1-cds	Tan0017744.1-cds-LG09:8649978..8650095	CDS
Tan0017744.1-cds	Tan0017744.1-cds-LG09:8650403..8650560	CDS
Tan0017744.1-cds	Tan0017744.1-cds-LG09:8650659..8650787	CDS
Tan0017744.1-cds	Tan0017744.1-cds-LG09:8650960..8651033	CDS
Tan0017744.1-cds	Tan0017744.1-cds-LG09:8651749..8651776	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017744.1-five_prime_utr	Tan0017744.1-five_prime_utr-LG09:8651777..8651924	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0017744.1	Tan0017744.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005509	calcium ion binding