Csor.00g257630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g257630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 528924 .. 530717 (-)
RNA-Seq ExpressionCsor.00g257630
SyntenyCsor.00g257630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAACTGCTTATCGGGGCCTCCAAACTTCACAACTGCTTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGGTATACTCGGCATGGCCAACCCTTTTCATGAACAGATCACTTTACAAATTCGGTATGACCGACCCTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGGTATACTCGGCATGGCCAACCCTTTTCATGAACAGATCACTTTACAAATTCGGTATGACCGACCCTTTTCATGAACAAATCACAAAACAAGAGCAGCATGGTCAGCTCTGTTCGTAAGCAAACCACTTTTCAAACTCGACATGTTTGGCTCTGTTTGTAAGCAAATCACTTTACAAACTGGCTATGGTCAATCCGTTTCATAAACAAATTACTTTACAACTGGACTTTTTTCATAAACAAATCACTTTACAAACTTGTAATGACATACCTTTTTCATGAGTAAATTACTTTACAAGTATAACTGACATCTTCACAGGCTTATCATGTTATTAATTTGGATGAAAATAACAATTTAATCCATAAATTTTAGTTTTTAACTGTTCAGTCCCAATACTTACATATTATAACAACGGTGTCCCCGATTGAATATACCAAATAAATAGTTATAAAATAAAGTTTACGAACTAAATTGTTATTTTCTACAAAGATTTCGATTTTTTTTTAGAATTGCAAAACGCATATTCTCCAATTTTAATTGAAAATAAAATTTAAATAGTCAAATTCGTAATTTTTGAGAAAAAAGAAAAAAATTAAATTTAAAAGATAAAAATAATGGGGGCAGCCTCTCGATATCATGGTGTGCCGTACGACTGCGCCTCAAAACATATCCGTCGAAGAAAGGAATTAGGGCAAGCAAATTAAGGGCTATTGTCGTAATTGTACATCACGATCGAGGGGCAAAATTGTAAACTGAAATAAAAGCGACGAAATGGTTCATGGAAACCCTAGACGCCCATAGTGGCTATAAATATGTGAGAAGTCTTGCTGCCAAGACCTCGCTGCTTGCTACTGCGTAAAATTGAGGCTGCTTCTTTCTTCTGATTTCTCTGCAAATTCTCGTGGGTAAGCATTCGATTCTTGACCTTTGTAGTTGTTTTTTGTTTCATGTTTCTCTCTTGTTCATGATTTTCTTTGAACTGCTTAAGTGATAGTTAGTCTTCAGCTTGTCTAGTTTGTTCTTTGATTTAGTTTATATTCTGGTTCGGATGTTTTGAGTCAGATCTATGAATTTGGCGGTGTAAATCTATGGTCCTTTACTAATCTTGTTTAGCTTAAGTAGATTTATGTTTATAAAATCACTGATTGCATCCTAGGTGTTCGACAATCGATGATTCAACGTTGTGTGCTTAATCTTTTGTTCTGATTTACATCTTTCTATAGTCTTTAGCTAGTATGCCGATATCTGTTGTTAAGTTCATGATGTTTCTTAGTTGGATTCAGCATCTTTCTGTGTCTCAATTAAATTTTTTGGATTCTTGCATAAGTTGTTAACAGTGGCTTATGGTCAGCATATATCCGAGTACATGTATGTGTGTTCGTAGGTTTAATATTTTAGGAGCTTCTGATTTCAATACGCCTATTCTTGACGTTGTTTGTACCGGTTGTATGTGTTGGAATTGGAGTTGATTTGTGTTCCGTAACTTCATTTGTTTGTAATGTTAGATTTGTATGTATTTGTGGAGTACTGACCCATGTATCTTTCTTTTTCTTGTAGGCTCATTTGGTTAATATCAAATGGGTAA

mRNA sequence

ATGCACAACTGCTTATCGGGGCCTCCAAACTTCACAACTGCTTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGGTATACTCGGCATGGCCAACCCTTTTCATGAACAGATCACTTTACAAATTCGGTATGACCGACCCTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGACCTCGCTGCTTGCTACTGCGTAAAATTGAGGCTGCTTCTTTCTTCTGATTTCTCTGCAAATTCTCGTGGGCTCATTTGGTTAATATCAAATGGGTAA

Coding sequence (CDS)

ATGCACAACTGCTTATCGGGGCCTCCAAACTTCACAACTGCTTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGGTATACTCGGCATGGCCAACCCTTTTCATGAACAGATCACTTTACAAATTCGGTATGACCGACCCTATCGGGGCCTCCAAACTAAACCGCTTTTGCAGCCTCACCCAACTTTTATAGACCTCGCTGCTTGCTACTGCGTAAAATTGAGGCTGCTTCTTTCTTCTGATTTCTCTGCAAATTCTCGTGGGCTCATTTGGTTAATATCAAATGGGTAA

Protein sequence

MHNCLSGPPNFTTAYRGLQTKPLLQPHPTFIGILGMANPFHEQITLQIRYDRPYRGLQTKPLLQPHPTFIDLAACYCVKLRLLLSSDFSANSRGLIWLISNG
Homology
[Close]
BLAST of Csor.00g257630 vs. NCBI nr
Match: KAG6574861.1 (hypothetical protein SDJN03_25500, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218 bits (555), Expect = 1.12e-71
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MHNCLSGPPNFTTAYRGLQTKPLLQPHPTFIGILGMANPFHEQITLQIRYDRPYRGLQTK 60
           MHNCLSGPPNFTTAYRGLQTKPLLQPHPTFIGILGMANPFHEQITLQIRYDRPYRGLQTK
Sbjct: 1   MHNCLSGPPNFTTAYRGLQTKPLLQPHPTFIGILGMANPFHEQITLQIRYDRPYRGLQTK 60

Query: 61  PLLQPHPTFIDLAACYCVKLRLLLSSDFSANSRGLIWLISNG 102
           PLLQPHPTFIDLAACYCVKLRLLLSSDFSANSRGLIWLISNG
Sbjct: 61  PLLQPHPTFIDLAACYCVKLRLLLSSDFSANSRGLIWLISNG 102

The following BLAST results are available for this feature:
BLAST of Csor.00g257630 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g257630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574861.11.12e-71100.00hypothetical protein SDJN03_25500, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g257630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g257630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g257630.m01Csor.00g257630.m01mRNA