Csor.00g171890 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g171890
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 3077836 .. 3078233 (+)
RNA-Seq ExpressionCsor.00g171890
SyntenyCsor.00g171890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTCGTCGGTTCGAACCCGTTTTAACCTTCCTCGAAGCACACATCCCCCATATCTCTCTCTCGCGCGCTTTCCCAATTCTAGCCTCCATCTTCCTTCTTCTCGATCTCCATAGCTGCACAGAGGCGAACTCCATTCAACAATCCATTCCATTACGTATACTACAGATTGTTAAACATCGTCCCGCGATCCACCGTCGTCTTACCACGGCGGTCGATTCTGTTCTCTTTAACCGATGCAATTTATGGTATTCTAGTTACTACCCTTTTCTTTTTTTGCGTATTTTCAATTGTTGGTTGGACTTGATGCGATGCCCGTCGTATTGATTTTCATGGGTGAATCTATTTTGATGATTTCTATCGTTGTTTTTGTTGTTAGGGTTGGGTATAATTGA

mRNA sequence

ATGGAAATTCGTCGGTTCGAACCCGTTTTAACCTTCCTCGAAGCACACATCCCCCATATCTCTCTCTCGCGCGCTTTCCCAATTCTAGCCTCCATCTTCCTTCTTCTCGATCTCCATAGCTGCACAGAGGCGAACTCCATTCAACAATCCATTCCATTACGTATACTACAGATTGTTAAACATCGTCCCGCGATCCACCGTCGTCTTACCACGGCGGTCGATTCTGTTCTCTTTAACCGATGCAATTTATGGGTTGGGTATAATTGA

Coding sequence (CDS)

ATGGAAATTCGTCGGTTCGAACCCGTTTTAACCTTCCTCGAAGCACACATCCCCCATATCTCTCTCTCGCGCGCTTTCCCAATTCTAGCCTCCATCTTCCTTCTTCTCGATCTCCATAGCTGCACAGAGGCGAACTCCATTCAACAATCCATTCCATTACGTATACTACAGATTGTTAAACATCGTCCCGCGATCCACCGTCGTCTTACCACGGCGGTCGATTCTGTTCTCTTTAACCGATGCAATTTATGGGTTGGGTATAATTGA

Protein sequence

MEIRRFEPVLTFLEAHIPHISLSRAFPILASIFLLLDLHSCTEANSIQQSIPLRILQIVKHRPAIHRRLTTAVDSVLFNRCNLWVGYN
Homology
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BLAST of Csor.00g171890 vs. NCBI nr
Match: KAG6577182.1 (hypothetical protein SDJN03_24756, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015179.1 hypothetical protein SDJN02_22812, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175 bits (443), Expect = 4.98e-55
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MEIRRFEPVLTFLEAHIPHISLSRAFPILASIFLLLDLHSCTEANSIQQSIPLRILQIVK 60
          MEIRRFEPVLTFLEAHIPHISLSRAFPILASIFLLLDLHSCTEANSIQQSIPLRILQIVK
Sbjct: 1  MEIRRFEPVLTFLEAHIPHISLSRAFPILASIFLLLDLHSCTEANSIQQSIPLRILQIVK 60

Query: 61 HRPAIHRRLTTAVDSVLFNRCNLWVGYN 88
          HRPAIHRRLTTAVDSVLFNRCNLWVGYN
Sbjct: 61 HRPAIHRRLTTAVDSVLFNRCNLWVGYN 88

The following BLAST results are available for this feature:
BLAST of Csor.00g171890 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g171890 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577182.14.98e-55100.00hypothetical protein SDJN03_24756, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g171890 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g171890 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g171890.m01Csor.00g171890.m01mRNA