Csor.00g095660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTAAGAAAAGGGGAATTTGATGATTGCCTCCATGAAGATCCGAAAGGCTCCATTATTGTTTCCATGAAAACTGAAATGAAGATCGTACGAATGTACCAGTCCCCAGCATTACCGAACCTCATAAATTGGACCATTATTGAATGGGGTATCATGTTTGAACGCTCTACAGAAGATCATATCTCGTATCCCCAGAAAATACAAAAGGAAATGCCATTAAAACCAGAGGCCCAAGATGTAGGATCTCCCGAATCCACCGCACCCCCGACTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCATTTGTTGGGGTCCCAGATGGGGTTTTGAATGTAACCTTCAACCACACATCTGCTGGCACTTGGCAGAATTACAGCCGTTGGATCAAAGGAAACTGTCAGTATTGTATCGCCGTTTAGCGCTCAAGAATCCACTTACTTCCCCCCCCTTTCTTTCGGGTTTGATCTGTAGCTGATGCTGAAAAGTGGGGCAGTTTCTTCTTCGGCAATTTTCCTTCGGATCAACCCCATTCTCAACGCTTCGCTACAGGATTCACTGTTTTGCTCCCTTTTTGAGGGTCAAAAGGTACCCCCCTCCTCTGCCCTACTTGTTCAAATTTTTCTTCCATTTCTGCTTCTGTGACGATTTTTGCGACTTTTTTGCGTTTTTCTTTTGAATCATAGTCTCTTTGGAGTGATTGTTTGTCCGATGATTGTTTCTGAAATGTGGCAAACCTTGGATATGTAAGTTTATTGAGAAACACGAACAGTTGATCCTAATTTTTCGAATTGAGCATGATATTTCGTTGATGGATCTTTGATTGGAAGGTAACTCTTTGGTGTCTCAAATGTCGATTTCTTGAAATTGTTATGTGTTTGTGTTGGTTCTTGCTTATCTCTTAGGAATCAGTAGAGTTGTAGTTCATAAGCCATACCATGAAACTGGAGAAGAAGAAAAGAATTCTTCTCTGCTGGCTTTTAACTAGTAAAGATACTTTCTAAATTTTTTCCATGACATCTAGCTAGGTAGATACACATAAAAATGTGTTGTAAGAAGCACTGAAGTGCTTTTGGAGTAAACATTTGAATAGTGTTTGAAGTCTTTACTCATAAACTATAACAATCCAAGCCCACCGCGAGTAGATATTAGTCTTTTTAGGCTTTTCTTTCTGGGTTTTCCGTCAAGGTTTTAAAACGTGTCTACTAGAGAAAGGTTTTCACACCTTTATAAAAGTTTTTAAACCTTGAGGGGAAGCATGGAAGAGAAAGCCCAAAGAAGACAATATCTGGGAGCATTGAGCTTGAGTTGTTACCTAGACAGTACTCGGAAAGCTTTTCCGAACACATTCTTAGTTGCTACCGTAGTTTCTTGGACACTTGGGTGCCTTTTCTTTGTTTTTCTCTCTATCCCCCGTGAATTCTCCTCAAGGAGCTCGTTTCCTTTATCTCATGTGTACAGAATTACAGATAACAGTTCTTCAAGGCAATGGTTGTTCATTATGGAGAAAATGGAAATCAATGGTAGAAATCCTAATTTGAAAGGGAATGGAAACCATTCTTCAGGTGATTCAAACGTTAAGTCTAATGAGATGCCTACATTCGTCAACCACGGTGAATCTCTTCGCTCAATCCATCGATTGTTAAGCTAGTGTTCAATATCATACCATTTGGTGACATCTCCATTGGATTGACCAACCAAATATCCTCGGACATGTCATGATGTTGCATCATTTTCTGTACAGCGGAGATAGCTTGGCATGAACGCAGGCGGGAATGGGTCGGCGACTGTTCGGGAAACATGCAACAAGTACCAATGGAACCAATCTTGAGGTATTAATTTGATTTAGCTTCAAGTGTCAGTTTAGAAACTGCTGTTGATTTCCCTGTTCTTGTGTTTGCTGAAGAAGATCTTCAATTGATTGTTGGTTGCAGCTGGACCACGACTTATGAAGATCTTCTTTTAACTGCAGAGCCTTTTCAGCAGCCGATTCCTTTAGCTGTAAGGTTTCTTTGTTCTTCATCCTCATCCTTCCCTTTCGATTCCTTATACTGTATAAAGCTTCTTTTTATTGGATTCTGCAGGAAATGGTGGACTTCTTGGTTGATATCTGGCATGAAGATGATCTCTATGATTAG ATGAAAGTAAGAAAAGGGGAATTTGATGATTGCCTCCATGAAGATCCGAAAGGCTCCATTATTGTTTCCATGAAAACTGAAATGAAGATCGTACGAATGTACCAGTCCCCAGCATTACCGAACCTCATAAATTGGACCATTATTGAATGGGGTATCATGTTTGAACGCTCTACAGAAGATCATATCTCGTATCCCCAGAAAATACAAAAGGAAATGCCATTAAAACCAGAGGCCCAAGATGTAGGATCTCCCGAATCCACCGCACCCCCGACTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCATTTGTTGGGGTCCCAGATGGGGTTTTGAATGTAACCTTCAACCACACATCTGCTGGCACTTGGCAGAATTACAGCCGTTGGATCAAAGGAAACTTGGGGCAGTTTCTTCTTCGGCAATTTTCCTTCGGATCAACCCCATTCTCAACGCTTCGCTACAGGATTCACTGTTTTGCTCCCTTTTTGAGGGTCAAAAGAATTACAGATAACAGTTCTTCAAGGCAATGGTTGTTCATTATGGAGAAAATGGAAATCAATGGTAGAAATCCTAATTTGAAAGGGAATGGAAACCATTCTTCAGGTGATTCAAACGTTAAGTCTAATGAGATGCCTACATTCGTCAACCACGCGGAGATAGCTTGGCATGAACGCAGGCGGGAATGGGTCGGCGACTGTTCGGGAAACATGCAACAAGTACCAATGGAACCAATCTTGAGCTGGACCACGACTTATGAAGATCTTCTTTTAACTGCAGAGCCTTTTCAGCAGCCGATTCCTTTAGCTGAAATGGTGGACTTCTTGGTTGATATCTGGCATGAAGATGATCTCTATGATTAG ATGAAAGTAAGAAAAGGGGAATTTGATGATTGCCTCCATGAAGATCCGAAAGGCTCCATTATTGTTTCCATGAAAACTGAAATGAAGATCGTACGAATGTACCAGTCCCCAGCATTACCGAACCTCATAAATTGGACCATTATTGAATGGGGTATCATGTTTGAACGCTCTACAGAAGATCATATCTCGTATCCCCAGAAAATACAAAAGGAAATGCCATTAAAACCAGAGGCCCAAGATGTAGGATCTCCCGAATCCACCGCACCCCCGACTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCATTTGTTGGGGTCCCAGATGGGGTTTTGAATGTAACCTTCAACCACACATCTGCTGGCACTTGGCAGAATTACAGCCGTTGGATCAAAGGAAACTTGGGGCAGTTTCTTCTTCGGCAATTTTCCTTCGGATCAACCCCATTCTCAACGCTTCGCTACAGGATTCACTGTTTTGCTCCCTTTTTGAGGGTCAAAAGAATTACAGATAACAGTTCTTCAAGGCAATGGTTGTTCATTATGGAGAAAATGGAAATCAATGGTAGAAATCCTAATTTGAAAGGGAATGGAAACCATTCTTCAGGTGATTCAAACGTTAAGTCTAATGAGATGCCTACATTCGTCAACCACGCGGAGATAGCTTGGCATGAACGCAGGCGGGAATGGGTCGGCGACTGTTCGGGAAACATGCAACAAGTACCAATGGAACCAATCTTGAGCTGGACCACGACTTATGAAGATCTTCTTTTAACTGCAGAGCCTTTTCAGCAGCCGATTCCTTTAGCTGAAATGGTGGACTTCTTGGTTGATATCTGGCATGAAGATGATCTCTATGATTAG MKVRKGEFDDCLHEDPKGSIIVSMKTEMKIVRMYQSPALPNLINWTIIEWGIMFERSTEDHISYPQKIQKEMPLKPEAQDVGSPESTAPPTCCCCCCSSSSFVGVPDGVLNVTFNHTSAGTWQNYSRWIKGNLGQFLLRQFSFGSTPFSTLRYRIHCFAPFLRVKRITDNSSSRQWLFIMEKMEINGRNPNLKGNGNHSSGDSNVKSNEMPTFVNHAEIAWHERRREWVGDCSGNMQQVPMEPILSWTTTYEDLLLTAEPFQQPIPLAEMVDFLVDIWHEDDLYD Homology
BLAST of Csor.00g095660 vs. NCBI nr
Match: KAG6580622.1 (hypothetical protein SDJN03_20624, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 601 bits (1549), Expect = 3.33e-217 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
BLAST of Csor.00g095660 vs. NCBI nr
Match: KAG7017380.1 (hypothetical protein SDJN02_19245, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 277 bits (709), Expect = 3.89e-91 Identity = 135/147 (91.84%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of Csor.00g095660 vs. NCBI nr
Match: XP_022934224.1 (uncharacterized protein LOC111441458 isoform X1 [Cucurbita moschata]) HSP 1 Score: 249 bits (637), Expect = 1.06e-80 Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Csor.00g095660 vs. NCBI nr
Match: XP_023526636.1 (uncharacterized protein LOC111790072 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245 bits (626), Expect = 5.32e-79 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Csor.00g095660 vs. NCBI nr
Match: XP_022983157.1 (uncharacterized protein LOC111481794 isoform X2 [Cucurbita maxima]) HSP 1 Score: 235 bits (600), Expect = 3.16e-75 Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0
BLAST of Csor.00g095660 vs. ExPASy TrEMBL
Match: A0A6J1F1Z4 (uncharacterized protein LOC111441458 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441458 PE=4 SV=1) HSP 1 Score: 249 bits (637), Expect = 5.15e-81 Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Csor.00g095660 vs. ExPASy TrEMBL
Match: A0A6J1IYH6 (uncharacterized protein LOC111481794 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481794 PE=4 SV=1) HSP 1 Score: 235 bits (600), Expect = 1.53e-75 Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0
BLAST of Csor.00g095660 vs. ExPASy TrEMBL
Match: A0A6J1J1B8 (uncharacterized protein LOC111481794 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481794 PE=4 SV=1) HSP 1 Score: 233 bits (594), Expect = 1.42e-74 Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of Csor.00g095660 vs. ExPASy TrEMBL
Match: A0A6J1F733 (uncharacterized protein LOC111441458 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441458 PE=4 SV=1) HSP 1 Score: 223 bits (568), Expect = 6.71e-71 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Csor.00g095660 vs. ExPASy TrEMBL
Match: A0A6J1J1C5 (uncharacterized protein LOC111481794 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111481794 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 1.83e-64 Identity = 97/100 (97.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Csor.00g095660 vs. TAIR 10
Match: AT5G03440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-23 Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Csor.00g095660 vs. TAIR 10
Match: AT5G03440.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-23 Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Csor.00g095660 vs. TAIR 10
Match: AT3G54880.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 137 Blast hits to 137 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 4.3e-20 Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Csor.00g095660 vs. TAIR 10
Match: AT3G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Csor.00g095660 vs. TAIR 10
Match: AT3G15770.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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