Csor.00g231940 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAATTTCTAAAGGGCTCTCATTTCTGGGGCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGTGGGGAACACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGCTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATTGAGACAACTTCTCCAGAGGAACCGGCGAACCAAAAAGTCGTCGTCTTGGGGCATTGA ATGCCAATTTCTAAAGGGCTCTCATTTCTGGGGCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGTGGGGAACACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGCTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATTGAGACAACTTCTCCAGAGGAACCGGCGAACCAAAAAGTCGTCGTCTTGGGGCATTGA ATGCCAATTTCTAAAGGGCTCTCATTTCTGGGGCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGTGGGGAACACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGCTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATTGAGACAACTTCTCCAGAGGAACCGGCGAACCAAAAAGTCGTCGTCTTGGGGCATTGA MPISKGLSFLGLVAIFICLLFIEVADAHSGHSGTHAVEKPCPGGGEHCHHSGRMAAQTVDEDDDFDDTYKAPVKGRMAMSMSESTEDAEERAVEMEIETTSPEEPANQKVVVLGH Homology
BLAST of Csor.00g231940 vs. NCBI nr
Match: KAG6589281.1 (hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229 bits (584), Expect = 1.10e-75 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Csor.00g231940 vs. NCBI nr
Match: KAG6572424.1 (hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102 bits (253), Expect = 3.01e-25 Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g231940 vs. NCBI nr
Match: KAA0061659.1 (hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 3.81e-16 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of Csor.00g231940 vs. NCBI nr
Match: KAE8647343.1 (hypothetical protein Csa_003811 [Cucumis sativus]) HSP 1 Score: 74.3 bits (181), Expect = 2.39e-14 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Csor.00g231940 vs. NCBI nr
Match: KAE8075603.1 (hypothetical protein FH972_014299 [Carpinus fangiana]) HSP 1 Score: 48.1 bits (113), Expect = 3.12e-04 Identity = 42/124 (33.87%), Postives = 59/124 (47.58%), Query Frame = 0
BLAST of Csor.00g231940 vs. ExPASy TrEMBL
Match: A0A0A0KE60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.12e-18 Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of Csor.00g231940 vs. ExPASy TrEMBL
Match: A0A5A7V7L4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00280 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.84e-16 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of Csor.00g231940 vs. ExPASy TrEMBL
Match: A0A5N6R9F8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014299 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.51e-04 Identity = 42/124 (33.87%), Postives = 59/124 (47.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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