Csor.00g089880 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g089880
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Dynein light chain
Location	Csor_Chr11: 2988774 .. 2989130 (+)
RNA-Seq Expression	Csor.00g089880
Synteny	Csor.00g089880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGGAAAGCCACCGTCAAACAAACCGACATGTCGGAGAAGATGCAGATTCACGCCAAGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCGCTTGCTGCACATATCAAGAAGGTATAATTTCCTTTTCCTTTTCATTTTAATTTTAATTTTAATTTGGTATGATATTATCAAAATTAAATCAATTAGGAATTTGATCGGAGCTATGGGAGTGGGTGGCAATGTGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCAAAGGGGACCTTCATCTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAAGCTGCTTCCAACTAA

mRNA sequence

ATGTTGGAAGGGAAAGCCACCGTCAAACAAACCGACATGTCGGAGAAGATGCAGATTCACGCCAAGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCGCTTGCTGCACATATCAAGAAGGAATTTGATCGGAGCTATGGGAGTGGGTGGCAATGTGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCAAAGGGGACCTTCATCTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAAGCTGCTTCCAACTAA

Coding sequence (CDS)

ATGTTGGAAGGGAAAGCCACCGTCAAACAAACCGACATGTCGGAGAAGATGCAGATTCACGCCAAGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCGCTTGCTGCACATATCAAGAAGGAATTTGATCGGAGCTATGGGAGTGGGTGGCAATGTGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCAAAGGGGACCTTCATCTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAAGCTGCTTCCAACTAA

Protein sequence

MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVVGSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN

Homology

[Close]

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          M + KA +K  DMSE+MQ  +   A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          M + KA +K  DMSE+MQ  +   A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          M + KA +K  DMSE+MQ  +   A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          M + KA +K  DMSE+MQ  +   A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot
Match: P63169 (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          M + KA +K  DMSE+MQ  +   A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Csor.00g089880 vs. NCBI nr
Match: XP_022933771.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dynein light chain 1, cytoplasmic-like [Cucurbita maxima] >XP_023529424.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6587968.1 hypothetical protein SDJN03_16533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021857.1 hypothetical protein SDJN02_15585 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189 bits (481), Expect = 1.14e-60
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93
          GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93

[Close]

BLAST of Csor.00g089880 vs. NCBI nr
Match: XP_038878771.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 173 bits (438), Expect = 4.14e-54
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ HA ASASHALDLFDVSD LSLAAHIKK+FDR+YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQSHAMASASHALDLFDVSDSLSLAAHIKKDFDRAYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93
          GSNFGCFFTHSKG+FIYFSLETLNFLIFK+ SN
Sbjct: 61 GSNFGCFFTHSKGSFIYFSLETLNFLIFKSPSN 93

[Close]

BLAST of Csor.00g089880 vs. NCBI nr
Match: XP_008462685.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 164 bits (416), Expect = 9.13e-51
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]

BLAST of Csor.00g089880 vs. NCBI nr
Match: XP_004150050.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical protein Csa_017734 [Cucumis sativus])

HSP 1 Score: 164 bits (415), Expect = 1.30e-50
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASAS ALDLFDVSD LSLA+HIKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASQALDLFDVSDSLSLASHIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]

BLAST of Csor.00g089880 vs. NCBI nr
Match: XP_022144999.1 (dynein light chain 1, cytoplasmic-like [Momordica charantia])

HSP 1 Score: 163 bits (412), Expect = 3.72e-50
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGK  VK+TDMSEKMQIHA ASASHALDLFDVSDCLSLAAHIKKEFDR+YG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFK 89
          GSNFG FFTHS  TFIYF+LETLNFLIFK
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 89

[Close]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL
Match: A0A6J1I806 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.50e-61
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93
          GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93

[Close]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL
Match: A0A6J1EZZ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.50e-61
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93
          GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93

[Close]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL
Match: A0A1S3CJ38 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1)

HSP 1 Score: 164 bits (416), Expect = 4.42e-51
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL
Match: A0A6J1CTX2 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1)

HSP 1 Score: 163 bits (412), Expect = 1.80e-50
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGK  VK+TDMSEKMQIHA ASASHALDLFDVSDCLSLAAHIKKEFDR+YG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFK 89
          GSNFG FFTHS  TFIYF+LETLNFLIFK
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 89

[Close]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL
Match: A0A1S3UQ79 (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV=1)

HSP 1 Score: 162 bits (411), Expect = 2.64e-50
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKA VK+TDMS KMQIHA A+ASHALDL+DVSDC+S+AAHIKKEFD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAASN 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK +S+
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGSSS 93

[Close]

BLAST of Csor.00g089880 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-35
Identity = 72/92 (78.26%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKA V+ +DM  KMQ+ A A AS ALDLFDV DC S+A HIKKEFD  YGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 93
          GSNFGCFFTHSKGTFIYF LETL FLIFK AS
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAS 92

[Close]

BLAST of Csor.00g089880 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-34
Identity = 69/92 (75.00%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKA V++TDM  KMQ+ A   AS +LDLFDV D +S+AAHIKKEFD  YGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 93
          G+NFGCFFTHSKGTFIYF L TLNFLIFK A+
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGAT 92

[Close]

BLAST of Csor.00g089880 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.1e-23
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60
          MLEGKA +  TDM + M+  A + AS ALD FDV++   +A  IKKEFDRSYGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAA 92
          G++FG F TH  G FI+FS+ +L  L+FK +
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGS 91

[Close]

BLAST of Csor.00g089880 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17
Identity = 42/59 (71.19%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCV 60
          MLEGKA V+ +DM  KMQ+ A A AS ALDLFDV DC S+A HIKKEFD  YGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of Csor.00g089880 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.0 bits (188), Expect = 8.8e-15
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 12  DMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVVGSNFGCFFTHS 71
           DM   MQ HA   A   LD  +      +A ++KKEFD+ YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  KGTFIYFSLETLNFLIFK 90
            G FIYFS++ L  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of Csor.00g089880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P61285	1.9e-14	44.44	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	1.9e-14	44.44	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	1.9e-14	44.44	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]
P63168	1.9e-14	44.44	Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1	[more]
P63169	1.9e-14	44.44	Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=...	[more]

BLAST of Csor.00g089880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933771.1	1.14e-60	100.00	dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dyne...	[more]
XP_038878771.1	4.14e-54	90.32	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
XP_008462685.1	9.13e-51	86.96	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]	[more]
XP_004150050.1	1.30e-50	86.96	dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical p...	[more]
XP_022144999.1	3.72e-50	88.76	dynein light chain 1, cytoplasmic-like [Momordica charantia]	[more]

BLAST of Csor.00g089880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I806	5.50e-61	100.00	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1	[more]
A0A6J1EZZ1	5.50e-61	100.00	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1	[more]
A0A1S3CJ38	4.42e-51	86.96	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1	[more]
A0A6J1CTX2	1.80e-50	88.76	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1	[more]
A0A1S3UQ79	2.64e-50	81.72	Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV...	[more]

BLAST of Csor.00g089880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	1.2e-35	78.26	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	2.9e-34	75.00	Dynein light chain type 1 family protein	[more]
AT4G27360.1	5.1e-23	56.04	Dynein light chain type 1 family protein	[more]
AT1G52240.1	1.1e-17	71.19	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	8.8e-15	48.72	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 1.9E-42 score: 157.0
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 2.9E-31 score: 107.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..92
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 4.3E-31 score: 108.8
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF71	DYNEIN LIGHT CHAIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g089880.m01	Csor.00g089880.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding