Csor.00g092710 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGACTTTGGGACATGACGATAATGGTGCACAATTTTGCTTCTCTCAGCCCTTTCATGGCGGCCGCAAGCTTCGCCCTCTTGTCCCTCGCCCCTTGCCTTCTCTTCGCCTCAATGCTGCCAACCTCCCTTCACCATATTACCATCTAGGTACGCATCTTTCGTCTATATACGTTAACGGGTGAGGAGCCGAATTTCTAACCCTTTGGTCGATGATGTAATATCTTTAACTATTGACGTCAATTATAGTTGAGTCATAGATTTCGAATGATTGTGAGTGATGGATAACGAATGAGTTATTAGGGCTATCCGGTTTTCGGGAGATTATGGAAGGAGAAATATATCGTACTCTATGAACTTAAACTTTTTCGGGTCGATGTTAAAAATTCTTTTTTTTGAGTTTCAGCTAATCTTTTGAATGATCAAAGCAAGAGAGAGTTGTTGAATAATGATGATAATGGTTTATCTTCTCCACCGGTAGTGGTAAGCTCATCAAGGTGGAATCCAACGCCGGAGCAGTTGAGAATTTTGGAGGAGCTTTACCGGCGGGGGACACGAACGCCGTCCGCGGACCAAATCCAACATATCACCGCTCAGCTCCGCCGCTTCGGCAAAATTGAAGGCAAAAACGTCTTCTATTGGTTTCAAAATCATAAGGCTAGAGAGCGGCAAAAACGACGCCGTCAAACGGCCGCTGAAGAACACAAATATTCAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAAATGCATTGAATTTGTGTTTTTGTGATTGCCATTTGGAGAAAAAGAAAAGAAAGTTGAATTCTTTTTGTCTTGGATTTTGTCAACACAGAGACAGAAAAAGGGTACGAAATTGAACAGACAAAGACGAACCGGCCTCGGCCAACTCCACCACCCTCTAACCTCTGCAGTAATACCACACTTTCACAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTACATCCAAAAAACCAAATCAAAATTAAAAACTAAACCAAACCCATTTCATATTTTTGAAAACCCATATGGAAATACACTCCGTTAGTAATCACGGATCTCCATAATGGTACGATATTATCCAATTTAAGTACATGCTTTCATGACCTTACTTTCAGCTTCCCTAAAAGATCCCAACAATCCTAGTCTGAGGTTTATGGAGACCTCGAACAGCCTTTCCTTAATCGAAGCTCGACTTTTTATCTGAAGTTCTCGAACAGAGTACACCCTTTGTTCGACACTTACTGACATGACTAAGTTAAGAGCATAACTCTGAAACTATGTTAGGAATCACGAATCTTCACAATGTTATGATATAATTCACTTTGAGCATAAGCTTTCATGACTTTACTTTTGGGCTTTCACAAAACATCTCATACCAATTAGATGTATGATCATTCCCTAAATTAGTCAATGTGTGGCTCCCTCTCAACAATCATTCCCTCGAAAAAAGTACGCTAGCTTATTGAGCACTGGAACAGCCTCCTCTTAATTAAGGCTCGACTCCCTGTTTCTCTACATCCAAAAACTAAATCAAAATAAAAAAAAATAAACCAAACCCATTTCGTATTTTTGAAAACCCAGATGGAATCATAAACCTTTGAACACAAAAACTCATTAGTTTTAGGATTAAGCTGCATGAGACATGAATATCTCAAACTTAGAACACAAAAAGTTTGCATCTTTTAGTTCTGGCAATGGAAATGGATATGTTGGGAAATGAAACGGGGTGGGGGGCGGGGGGCCCAAAAGCTGCTGCATTTCTTCCCTTCTGTCGGGGCTGAGAAATCTTTGGGGTTTGTGCTCATAACATATCCATTCATGTCCTTATGCCCTTTTACTTCTTCACAAAACCCCTTCTGCCTTTATGTTTCTACACAAATACAAAAGGGTTGTACCAATTCTTTTCTTTTTCTTCACCCTCCCTTCCTTCTTCTCTTTGTTCTTCATACTTTTAATGCCATTCAATTTGGGTTTTGTTTTTATTCTTTGAGTTTCTGATTTTATCATACGATTCCATGTCCAATCTTTTTTCGAACAACGATACTTGCATCCTTCTTAAAAGATTTGACTTTCTTAATAGATAAGCCGTAAAATCTCATGTCGGTTGAGGAGGAGAACAAAACAGAGTTTATAAGAGTGTGGAAACCTCTCCCTAATATACGTGTTTTAAAAACCTCGAGGTAAACCCGAAAAGAAAACCCAAAGAGAACAATATCTGCTAGGGTGGGCTTGGGCCGTTACAAATGGAATCAGAGTCAAACGCCGAGCGATGTGTCAGCGATGAGGTTGTTTCCTGAATGGGGTAGACACGAGGCGGTGTGCCAGACGCTGGGTCTCACATCGATTGGAGAAGTGAACGAGTGCCAGCAAGAACGCAGGTCCTGAAAGGGGCGGATTGTGAGATCCCATCTACCTAATAGAAGCATTTTAAAAACCTTGAGGGAAAGTAAAAAAAGACCATATCTGATGGCTAATGGTGGACTTGGGCGGTTACATAAGCTGATTGTAATAGAGAGGTGCGTCCCTATACCTAAAAGGATGGATGAGTTGGGTTCGAGTGTTCATGAATTGGGTGTACGAGATGAGATAAGGTGTGGTGCAATCTGGTCAATGTATCTATTTTGAGTATAAAGGGTCTCATAGGTACGAATCCCATCACCTTGACGTGGTATTCTCGAGCGTCAAAGTGCAAGACCCTGTAACCTATCCATGGTCACGTCAAAAACTCGTATTAATATCCACTAATCGATGTCTAGACACGTTATGAAAACGTTTATATTATCTAAGGGATAAAGACTGAGAATAGATTCTTCCACATGCAGGAATTTGCAAAGATCCAAACAACAACAAAAGTAGTGGAATTGGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAGATGGAACATGGAATAATGATACAGTGAATTGTCAACTCATAAACCTTACAAGGAACACCCGACATCTAAACAGTGTCATCGAACCCCGCAACGATCCAAGACGATACAATATCGTTAACGATGACGAGGAATCCGAGACGACGACGCTCCAGTTGTTTCCTCTGAGCAGCATGAAGTACTGCAAATACGAGAGCGAGAATGAGAACGAGAGGGAGGAACGACAAGACGATCGGCTGGATTCGAACATGATCAAGAGCTCGACGTCCACATTTTCTCCCAGTTGTTTCAAGTTCTTTGAGTTTCTTCCTCTCAAAAACTGA ATGTGGACTTTGGGACATGACGATAATGGTGCACAATTTTGCTTCTCTCAGCCCTTTCATGGCGGCCGCAAGCTTCGCCCTCTTGTCCCTCGCCCCTTGCCTTCTCTTCGCCTCAATGCTGCCAACCTCCCTTCACCATATTACCATCTAGCTAATCTTTTGAATGATCAAAGCAAGAGAGAGTTGTTGAATAATGATGATAATGGTTTATCTTCTCCACCGGTAGTGGTAAGCTCATCAAGGTGGAATCCAACGCCGGAGCAGTTGAGAATTTTGGAGGAGCTTTACCGGCGGGGGACACGAACGCCGTCCGCGGACCAAATCCAACATATCACCGCTCAGCTCCGCCGCTTCGGCAAAATTGAAGGCAAAAACGTCTTCTATTGGTTTCAAAATCATAAGGCTAGAGAGCGGCAAAAACGACGCCGTCAAACGGCCGCTGAAGAACACAAATATTCAGAGACAGAAAAAGGGTACGAAATTGAACAGACAAAGACGAACCGGCCTCGGCCAACTCCACCACCCTCTAACCTCTGCAGTAATACCACACTTTCACAGGAATTTGCAAAGATCCAAACAACAACAAAAGTAGTGGAATTGGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAGATGGAACATGGAATAATGATACAGTGAATTGTCAACTCATAAACCTTACAAGGAACACCCGACATCTAAACAGTGTCATCGAACCCCGCAACGATCCAAGACGATACAATATCGTTAACGATGACGAGGAATCCGAGACGACGACGCTCCAGTTGTTTCCTCTGAGCAGCATGAAGTACTGCAAATACGAGAGCGAGAATGAGAACGAGAGGGAGGAACGACAAGACGATCGGCTGGATTCGAACATGATCAAGAGCTCGACGTCCACATTTTCTCCCAGTTGTTTCAAGTTCTTTGAGTTTCTTCCTCTCAAAAACTGA ATGTGGACTTTGGGACATGACGATAATGGTGCACAATTTTGCTTCTCTCAGCCCTTTCATGGCGGCCGCAAGCTTCGCCCTCTTGTCCCTCGCCCCTTGCCTTCTCTTCGCCTCAATGCTGCCAACCTCCCTTCACCATATTACCATCTAGCTAATCTTTTGAATGATCAAAGCAAGAGAGAGTTGTTGAATAATGATGATAATGGTTTATCTTCTCCACCGGTAGTGGTAAGCTCATCAAGGTGGAATCCAACGCCGGAGCAGTTGAGAATTTTGGAGGAGCTTTACCGGCGGGGGACACGAACGCCGTCCGCGGACCAAATCCAACATATCACCGCTCAGCTCCGCCGCTTCGGCAAAATTGAAGGCAAAAACGTCTTCTATTGGTTTCAAAATCATAAGGCTAGAGAGCGGCAAAAACGACGCCGTCAAACGGCCGCTGAAGAACACAAATATTCAGAGACAGAAAAAGGGTACGAAATTGAACAGACAAAGACGAACCGGCCTCGGCCAACTCCACCACCCTCTAACCTCTGCAGTAATACCACACTTTCACAGGAATTTGCAAAGATCCAAACAACAACAAAAGTAGTGGAATTGGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAGATGGAACATGGAATAATGATACAGTGAATTGTCAACTCATAAACCTTACAAGGAACACCCGACATCTAAACAGTGTCATCGAACCCCGCAACGATCCAAGACGATACAATATCGTTAACGATGACGAGGAATCCGAGACGACGACGCTCCAGTTGTTTCCTCTGAGCAGCATGAAGTACTGCAAATACGAGAGCGAGAATGAGAACGAGAGGGAGGAACGACAAGACGATCGGCTGGATTCGAACATGATCAAGAGCTCGACGTCCACATTTTCTCCCAGTTGTTTCAAGTTCTTTGAGTTTCTTCCTCTCAAAAACTGA MWTLGHDDNGAQFCFSQPFHGGRKLRPLVPRPLPSLRLNAANLPSPYYHLANLLNDQSKRELLNNDDNGLSSPPVVVSSSRWNPTPEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAAEEHKYSETEKGYEIEQTKTNRPRPTPPPSNLCSNTTLSQEFAKIQTTTKVVELEEEEEEERRRDGTWNNDTVNCQLINLTRNTRHLNSVIEPRNDPRRYNIVNDDEESETTTLQLFPLSSMKYCKYESENENEREERQDDRLDSNMIKSSTSTFSPSCFKFFEFLPLKN Homology
BLAST of Csor.00g092710 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38 Identity = 138/383 (36.03%), Postives = 196/383 (51.17%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23 Identity = 82/213 (38.50%), Postives = 109/213 (51.17%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21 Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21 Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.1e-21 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Csor.00g092710 vs. NCBI nr
Match: KAG6587685.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 630 bits (1625), Expect = 9.66e-228 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
BLAST of Csor.00g092710 vs. NCBI nr
Match: XP_022933520.1 (WUSCHEL-related homeobox 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 613 bits (1582), Expect = 3.22e-221 Identity = 310/316 (98.10%), Postives = 312/316 (98.73%), Query Frame = 0
BLAST of Csor.00g092710 vs. NCBI nr
Match: XP_023531667.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 609 bits (1570), Expect = 2.34e-219 Identity = 306/316 (96.84%), Postives = 308/316 (97.47%), Query Frame = 0
BLAST of Csor.00g092710 vs. NCBI nr
Match: XP_023003759.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima]) HSP 1 Score: 575 bits (1482), Expect = 7.55e-206 Identity = 296/324 (91.36%), Postives = 305/324 (94.14%), Query Frame = 0
BLAST of Csor.00g092710 vs. NCBI nr
Match: XP_022933521.1 (WUSCHEL-related homeobox 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 552 bits (1422), Expect = 3.10e-197 Identity = 285/316 (90.19%), Postives = 287/316 (90.82%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy TrEMBL
Match: A0A6J1F538 (WUSCHEL-related homeobox 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440922 PE=3 SV=1) HSP 1 Score: 613 bits (1582), Expect = 1.56e-221 Identity = 310/316 (98.10%), Postives = 312/316 (98.73%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy TrEMBL
Match: A0A6J1KU86 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497245 PE=3 SV=1) HSP 1 Score: 575 bits (1482), Expect = 3.65e-206 Identity = 296/324 (91.36%), Postives = 305/324 (94.14%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy TrEMBL
Match: A0A6J1EZA1 (WUSCHEL-related homeobox 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440922 PE=3 SV=1) HSP 1 Score: 552 bits (1422), Expect = 1.50e-197 Identity = 285/316 (90.19%), Postives = 287/316 (90.82%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy TrEMBL
Match: A0A0A0LSV4 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025040 PE=3 SV=1) HSP 1 Score: 355 bits (911), Expect = 4.11e-119 Identity = 210/336 (62.50%), Postives = 246/336 (73.21%), Query Frame = 0
BLAST of Csor.00g092710 vs. ExPASy TrEMBL
Match: A0A6J1BZR8 (WUSCHEL-related homeobox 1 OS=Momordica charantia OX=3673 GN=LOC111006971 PE=3 SV=1) HSP 1 Score: 314 bits (805), Expect = 1.07e-103 Identity = 200/329 (60.79%), Postives = 231/329 (70.21%), Query Frame = 0
BLAST of Csor.00g092710 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 160.2 bits (404), Expect = 2.7e-39 Identity = 138/383 (36.03%), Postives = 196/383 (51.17%), Query Frame = 0
BLAST of Csor.00g092710 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 112.1 bits (279), Expect = 8.3e-25 Identity = 82/213 (38.50%), Postives = 109/213 (51.17%), Query Frame = 0
BLAST of Csor.00g092710 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 102.8 bits (255), Expect = 5.1e-22 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Csor.00g092710 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 102.1 bits (253), Expect = 8.6e-22 Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of Csor.00g092710 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 ) HSP 1 Score: 100.9 bits (250), Expect = 1.9e-21 Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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