Csor.00g093100 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG MEPCIDSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLDDAPVDSVSSDAESIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKILDEADVSIDRELAIPDLDSVISSFEKEINVPVPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDEVPNYCWLENLSSEIEWNRREEEVAALGGLLDHNTDGAVELPPYRSETMFCL Homology
BLAST of Csor.00g093100 vs. NCBI nr
Match: KAG6587646.1 (hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 442 bits (1138), Expect = 1.27e-156 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Csor.00g093100 vs. NCBI nr
Match: KAG7021606.1 (hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441 bits (1134), Expect = 5.19e-156 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Csor.00g093100 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433 bits (1113), Expect = 8.26e-153 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Csor.00g093100 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (676), Expect = 1.87e-86 Identity = 154/227 (67.84%), Postives = 168/227 (74.01%), Query Frame = 0
BLAST of Csor.00g093100 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258 bits (659), Expect = 7.16e-84 Identity = 152/227 (66.96%), Postives = 166/227 (73.13%), Query Frame = 0
BLAST of Csor.00g093100 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 249 bits (637), Expect = 6.46e-81 Identity = 147/227 (64.76%), Postives = 161/227 (70.93%), Query Frame = 0
BLAST of Csor.00g093100 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 7.85e-66 Identity = 137/232 (59.05%), Postives = 152/232 (65.52%), Query Frame = 0
BLAST of Csor.00g093100 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 1.18e-65 Identity = 137/232 (59.05%), Postives = 151/232 (65.09%), Query Frame = 0
BLAST of Csor.00g093100 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 2.24e-65 Identity = 137/232 (59.05%), Postives = 151/232 (65.09%), Query Frame = 0
BLAST of Csor.00g093100 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 203 bits (517), Expect = 1.01e-62 Identity = 135/234 (57.69%), Postives = 154/234 (65.81%), Query Frame = 0
BLAST of Csor.00g093100 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 9.8e-12 Identity = 58/175 (33.14%), Postives = 87/175 (49.71%), Query Frame = 0
BLAST of Csor.00g093100 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11 Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 0
BLAST of Csor.00g093100 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11 Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 0
BLAST of Csor.00g093100 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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