Csor.00g087120 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTCCTTCTTACTTTTCTATCTTTGGCGTTTTCGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCCAAAGGTACTCTCTCTGTCTCTCTCTCTCTCTCCCCCTGCTTCTTCTTTTCCAGTTGTTTCTGTGCTTTGCATGTATATTTGAAACTACATACCTCTACCGTGAAATCTAATTCAAAGAACAGGGGACCAAAATTGGTACTTTTACCTAAATTTTTTTCCCTCGAAATCTTTGGGTTGTTCTTTACCCCACCCATATACATGTTTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAGGAGGGAAAGGACAAATCCGAGGGTAGAATCTCAAAATGGATGAGTATTATCTCAAAGTCTATGGATGAGTATGATCTCAAAATCAATGGGTAGAATCTCTCACTTCTTTAATTCTTTTTGACTTAAAAACAACCCCCACTTGAGCTATTTGGTTGTTTTTATCCCCCATGTACATATTTGGTTCCTTTTTTTTTTTCGATTGAAGATAAGAGGACAGTTCAAATTTGAAGTGGCTATGTGGTATCAATTATCCTTCCAACATCGATATCGATAGTTGAATCCCAACTCCTAAGCTAGCGTTCTAGGAGAATCAGCCTCTGATTCAACACCTAAGCTAGCGTTCTAGGAGAATCAGCCTCTGATTCAACACCTAAGCTAGCGTTCTAGGTGAATCAGCCTCTAATTCAACACCTAAGCTAGCGTTCTAGGAGAATCAGCTTCATTTGAGAGAAAAATTGAAGGCAGATATGACTAAAATATGTCTATTAAGAACTAAATTGAAAAGAAAAAAGAAACAAAATCTTAATGTAGGAAGATTTATTAGAATATTACACAACACCAGGAGGTGGATTTGAACCTCTAAAAAAAACACCATACCTAGGAGGTGGATTTGAACTTGAAAGATTTCTTAGTTTAGGAAGATCTCTTAGAATATTACAACATACCTAGGAGGTGGATTTGATCTTGTAAAAAAAGACAAGAATAGGATTTTTGTGGCATATTATCGAATAGCTTTGTGTAACCCAAATTTCTAAGCAGGACAGTTTAATTAACAGATTGTTGTAAATTTGTATAAACATTGTAGAAACGTGCCTAGATAATTGTTTCCTTTTTTAATTTTAAATCATATCTGATTTAAAGAAACTGTTTTCTTAAAATCTGATCATGACTAGAGTTGAATTATGCATATAATTAGCATTTTATTCCAAGGAATTCCCATACTTCCTATGCCTTACCTTGCACTTTCTTTTTTTATTTATTTTTTATTTTTGTTAATTCTTACCTCGAGAAAATTTATCATCACCAATTTTTAAGAGATTGAACTAATTAGACAAATAAGAAATCGAAGGCACCTTATTAGTTGTGTAAAAAAGAAGAATACCAATCACCTGATTGCAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAAACTCTACTGCTCGCGAACTACACGCACTCGCAGTACGCGAAGTATTTGAACGATTCGAGATTCGTCGGCGCCGGGGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGGTGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG ATGTCTTCTCCTTCTTACTTTTCTATCTTTGGCGTTTTCGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCCAAAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAAACTCTACTGCTCGCGAACTACACGCACTCGCAGTACGCGAAGTATTTGAACGATTCGAGATTCGTCGGCGCCGGGGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGGTGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG ATGTCTTCTCCTTCTTACTTTTCTATCTTTGGCGTTTTCGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCCAAAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAAACTCTACTGCTCGCGAACTACACGCACTCGCAGTACGCGAAGTATTTGAACGATTCGAGATTCGTCGGCGCCGGGGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGGTGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG MSSPSYFSIFGVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLVASVWGCVALALLGLMIGNFVRL Homology
BLAST of Csor.00g087120 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.1e-33 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30 Identity = 78/182 (42.86%), Postives = 110/182 (60.44%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0
BLAST of Csor.00g087120 vs. NCBI nr
Match: KAG6599253.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386 bits (991), Expect = 4.51e-135 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g087120 vs. NCBI nr
Match: XP_022946761.1 (uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_023545378.1 uncharacterized GPI-anchored protein At3g06035 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385 bits (988), Expect = 1.29e-134 Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g087120 vs. NCBI nr
Match: XP_022999135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]) HSP 1 Score: 370 bits (951), Expect = 5.66e-129 Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0
BLAST of Csor.00g087120 vs. NCBI nr
Match: KAG7030253.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 337 bits (863), Expect = 5.07e-113 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Csor.00g087120 vs. NCBI nr
Match: XP_008454814.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo] >ABR67421.1 GPI-anchored protein-like protein II [Cucumis melo subsp. melo] >KAA0047959.1 putative GPI-anchored protein [Cucumis melo var. makuwa] >TYK18316.1 putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (798), Expect = 1.14e-105 Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy TrEMBL
Match: A0A6J1G4I7 (uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=LOC111450734 PE=4 SV=1) HSP 1 Score: 385 bits (988), Expect = 6.26e-135 Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy TrEMBL
Match: A0A6J1KEG4 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111493609 PE=4 SV=1) HSP 1 Score: 370 bits (951), Expect = 2.74e-129 Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy TrEMBL
Match: A0A5A7U3D6 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00270 PE=4 SV=1) HSP 1 Score: 311 bits (798), Expect = 5.50e-106 Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy TrEMBL
Match: A6YTC7 (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 311 bits (798), Expect = 5.50e-106 Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 0
BLAST of Csor.00g087120 vs. ExPASy TrEMBL
Match: A0A1S3C074 (uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103495124 PE=4 SV=1) HSP 1 Score: 311 bits (798), Expect = 5.50e-106 Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 0
BLAST of Csor.00g087120 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47 Identity = 97/189 (51.32%), Postives = 122/189 (64.55%), Query Frame = 0
BLAST of Csor.00g087120 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Csor.00g087120 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31 Identity = 78/182 (42.86%), Postives = 110/182 (60.44%), Query Frame = 0
BLAST of Csor.00g087120 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 0
BLAST of Csor.00g087120 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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