Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTTGAAGCGCTGAAGAGGGATTTGGAGTGTCTTGCTGAAAATCAGCAACAAAGGGTGCGTTACTACGAGAGTAGAGCCAATTACACGACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTTTGCTGTCTCCTCTAATTCCTCCTCTCTCCACTGTGTTCATTGGCCCATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTGAGGGCACTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCGCCGTCGCCTTTGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGTAAGTATGTGGTGTGCAACTGA
mRNA sequence
ATGGAGCTTGAAGCGCTGAAGAGGGATTTGGAGTGTCTTGCTGAAAATCAGCAACAAAGGGTGCGTTACTACGAGAGTAGAGCCAATTACACGACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTTTGCTGTCTCCTCTAATTCCTCCTCTCTCCACTGTGTTCATTGGCCCATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTGAGGGCACTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCGCCGTCGCCTTTGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGTAAGTATGTGGTGTGCAACTGA
Coding sequence (CDS)
ATGGAGCTTGAAGCGCTGAAGAGGGATTTGGAGTGTCTTGCTGAAAATCAGCAACAAAGGGTGCGTTACTACGAGAGTAGAGCCAATTACACGACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTTTGCTGTCTCCTCTAATTCCTCCTCTCTCCACTGTGTTCATTGGCCCATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTGAGGGCACTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCGCCGTCGCCTTTGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGTAAGTATGTGGTGTGCAACTGA
Protein sequence
MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPMVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDGVEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN
Homology
BLAST of Csor.00g224520 vs. NCBI nr
Match:
KAG6605757.1 (hypothetical protein SDJN03_03074, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 340 bits (871), Expect = 1.24e-117
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM
Sbjct: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG
Sbjct: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN 171
VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN
Sbjct: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN 171
BLAST of Csor.00g224520 vs. NCBI nr
Match:
XP_022957795.1 (uncharacterized protein LOC111459230 isoform X1 [Cucurbita moschata])
HSP 1 Score: 302 bits (773), Expect = 1.08e-102
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFYFAVSSNSS+LHCVHWPM
Sbjct: 1 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYFAVSSNSSTLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
V GLSLS SSLY LILLPPFIKLYRTHNLLHTICN+HTHLCQRILE+TNQDGEAGAST G
Sbjct: 61 VFGLSLSCSSLYLLILLPPFIKLYRTHNLLHTICNQHTHLCQRILEATNQDGEAGASTHG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN 171
VEFNVRFHQVRALHNDSFSGGEIKVYTCA+AFAL AVTAF+L ACKYV+C
Sbjct: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAIAFALLAVTAFELGACKYVLCK 171
BLAST of Csor.00g224520 vs. NCBI nr
Match:
KAG6605756.1 (hypothetical protein SDJN03_03073, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 302 bits (773), Expect = 2.45e-100
Identity = 153/171 (89.47%), Postives = 160/171 (93.57%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFYFAVSSNSS+LHCVHWPM
Sbjct: 161 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYFAVSSNSSTLHCVHWPM 220
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
V GLSLS SSLY LILLPPFIKLYRTHNLLHTICN+HTHLCQRILE+TNQDGEAGAST G
Sbjct: 221 VFGLSLSCSSLYLLILLPPFIKLYRTHNLLHTICNQHTHLCQRILEATNQDGEAGASTHG 280
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN 171
VEFN RFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAF+LYA KYV+C
Sbjct: 281 VEFNFRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFELYAGKYVLCK 331
BLAST of Csor.00g224520 vs. NCBI nr
Match:
XP_023533522.1 (uncharacterized protein LOC111795372 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 274 bits (700), Expect = 3.40e-91
Identity = 141/151 (93.38%), Postives = 144/151 (95.36%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSS-LHCVHWP 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFY AVSSNSSS LHCVHW
Sbjct: 8 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYSAVSSNSSSTLHCVHWA 67
Query: 61 MVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTD 120
MVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTD
Sbjct: 68 MVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTD 127
Query: 121 GVEFNVRFHQVRALHNDSFSGGEIKVYTCAV 150
GVEFNVRFHQVRALHNDSFSGGEIKVYTC+V
Sbjct: 128 GVEFNVRFHQVRALHNDSFSGGEIKVYTCSV 158
BLAST of Csor.00g224520 vs. NCBI nr
Match:
XP_022957796.1 (uncharacterized protein LOC111459230 isoform X2 [Cucurbita moschata])
HSP 1 Score: 272 bits (696), Expect = 4.64e-91
Identity = 136/150 (90.67%), Postives = 142/150 (94.67%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFYFAVSSNSS+LHCVHWPM
Sbjct: 1 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYFAVSSNSSTLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
V GLSLS SSLY LILLPPFIKLYRTHNLLHTICN+HTHLCQRILE+TNQDGEAGAST G
Sbjct: 61 VFGLSLSCSSLYLLILLPPFIKLYRTHNLLHTICNQHTHLCQRILEATNQDGEAGASTHG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAV 150
VEFNVRFHQVRALHNDSFSGGEIKVYTC+V
Sbjct: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCSV 150
BLAST of Csor.00g224520 vs. ExPASy TrEMBL
Match:
A0A6J1H1I5 (uncharacterized protein LOC111459230 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459230 PE=4 SV=1)
HSP 1 Score: 302 bits (773), Expect = 5.25e-103
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFYFAVSSNSS+LHCVHWPM
Sbjct: 1 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYFAVSSNSSTLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
V GLSLS SSLY LILLPPFIKLYRTHNLLHTICN+HTHLCQRILE+TNQDGEAGAST G
Sbjct: 61 VFGLSLSCSSLYLLILLPPFIKLYRTHNLLHTICNQHTHLCQRILEATNQDGEAGASTHG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYACKYVVCN 171
VEFNVRFHQVRALHNDSFSGGEIKVYTCA+AFAL AVTAF+L ACKYV+C
Sbjct: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAIAFALLAVTAFELGACKYVLCK 171
BLAST of Csor.00g224520 vs. ExPASy TrEMBL
Match:
A0A6J1H082 (uncharacterized protein LOC111459230 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459230 PE=4 SV=1)
HSP 1 Score: 272 bits (696), Expect = 2.25e-91
Identity = 136/150 (90.67%), Postives = 142/150 (94.67%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MELE ++RDLE LAE QQQRVRYYESRA YTTLGYLAWLRFFYFAVSSNSS+LHCVHWPM
Sbjct: 1 MELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYFAVSSNSSTLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
V GLSLS SSLY LILLPPFIKLYRTHNLLHTICN+HTHLCQRILE+TNQDGEAGAST G
Sbjct: 61 VFGLSLSCSSLYLLILLPPFIKLYRTHNLLHTICNQHTHLCQRILEATNQDGEAGASTHG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAV 150
VEFNVRFHQVRALHNDSFSGGEIKVYTC+V
Sbjct: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCSV 150
BLAST of Csor.00g224520 vs. ExPASy TrEMBL
Match:
A0A6J1H1A1 (uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC111459231 PE=4 SV=1)
HSP 1 Score: 241 bits (616), Expect = 3.34e-79
Identity = 126/164 (76.83%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
MEL+ LKRD E LAEN+QQ+VRYY+SR NYTT+ YLAWLRFFYFA+SS SS+LHCVHWPM
Sbjct: 1 MELQWLKRDFETLAENKQQKVRYYDSRVNYTTMAYLAWLRFFYFALSSASSTLHCVHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
VLGLSLSSS LYFLILL PFIKLYRTHNLL TIC HT +CQRILE+ NQD EAGAS DG
Sbjct: 61 VLGLSLSSSFLYFLILLQPFIKLYRTHNLLDTICKEHTLICQRILEAMNQDAEAGASNDG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLYA 164
V F+ QVRAL +DSF GGE+KVY CA+AFAL AVTAF+LYA
Sbjct: 121 VRFDFGL-QVRALSDDSFCGGEMKVYGCAIAFALLAVTAFELYA 163
BLAST of Csor.00g224520 vs. ExPASy TrEMBL
Match:
A0A6J1H053 (uncharacterized protein LOC111459230 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111459230 PE=4 SV=1)
HSP 1 Score: 221 bits (564), Expect = 2.41e-71
Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 0
Query: 1 MELEALKRDLECLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVHWPM 60
M+L+ ++RD E LAEN VRYY+SRA TTL YL+WLRFFYFAVS SS+LHC HWPM
Sbjct: 1 MKLQWVRRDFESLAEN----VRYYKSRATCTTLAYLSWLRFFYFAVSPASSTLHCFHWPM 60
Query: 61 VLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDG 120
VL LSLSSS LYFLILLP FIKLYR HNLLHTICN+HTH+CQRI E+ NQ+G+AGA DG
Sbjct: 61 VLDLSLSSSFLYFLILLPAFIKLYRIHNLLHTICNQHTHICQRIWEAMNQNGQAGALNDG 120
Query: 121 VEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLY 163
V F+ QVRAL +DSFSGGEIKVY CA+AFALFAVTAF+LY
Sbjct: 121 VGFDFGV-QVRALTDDSFSGGEIKVYGCAIAFALFAVTAFELY 158
BLAST of Csor.00g224520 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 135 bits (340), Expect = 3.74e-37
Identity = 84/173 (48.55%), Postives = 107/173 (61.85%), Query Frame = 0
Query: 1 MELEALKRDLE---CLAENQQQRVRYYESRANYTTLGYLAWLRFFYFAVSSNSSSLHCVH 60
M+L LKRD E LAE Q+ +R+YESRA T+GYL W RFF+FA+S SS L C+
Sbjct: 1 MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCID 60
Query: 61 WPMVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDG----- 120
W +VLGLSL S +YFL+ L LYRT N + IC + +CQ+IL++ NQD
Sbjct: 61 WRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAM 120
Query: 121 EAGASTDGVEFNVRFHQVRALHND-SFSGGEIKVYTCAVAFALFAVTAFQLYA 164
EAG +DGV FN FH L+ D SF + KVY A+ +L AVTA +LYA
Sbjct: 121 EAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6605757.1 | 1.24e-117 | 100.00 | hypothetical protein SDJN03_03074, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022957795.1 | 1.08e-102 | 88.89 | uncharacterized protein LOC111459230 isoform X1 [Cucurbita moschata] | [more] |
KAG6605756.1 | 2.45e-100 | 89.47 | hypothetical protein SDJN03_03073, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023533522.1 | 3.40e-91 | 93.38 | uncharacterized protein LOC111795372 [Cucurbita pepo subsp. pepo] | [more] |
XP_022957796.1 | 4.64e-91 | 90.67 | uncharacterized protein LOC111459230 isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H1I5 | 5.25e-103 | 88.89 | uncharacterized protein LOC111459230 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1H082 | 2.25e-91 | 90.67 | uncharacterized protein LOC111459230 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1H1A1 | 3.34e-79 | 76.83 | uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC1114592... | [more] |
A0A6J1H053 | 2.41e-71 | 73.01 | uncharacterized protein LOC111459230 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1DTV6 | 3.74e-37 | 48.55 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |