Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCATTATTTCTCCTCGCCCTCTTCGCCCTCTTCTCTCCGGCGAAACCAGACGCCGCCCTCATCCGAAACCTCTGCGGCAGAACCGAGCAGCCGGTGATTTGTTCTGCTTGCCTCAATTCCGACTCCGCCAGCCGGACAGCCAATGGGCGTGGACTCGCAGTCATCGCCGTCGGATGTGCGGAGAGGAATACCAGAGCAATGGCCCAGAGGATCGGCGACATTTCCCGTAGAACGCCGAATTCCCCTGTGAAGACGCTGTTGAACGATTGCTGGTTTTCTACAGGGTATGCCGCCGGCAATTTTCCAGGAATCAGAAGTGCGGTCCAAGGAGGAGATTATGCCCGTGCCAGAAACGGCGTGGAGATTTCGATTAGGAATGTCAATAGCTGCTTGGCTGGGTTCGATAAAAACCCTTCGGTCCCGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGCCGTTCAGAGCTGCCGGATTGTTTTGGGGATATTAAACAACATTTAA
mRNA sequence
ATGCTTCCATTATTTCTCCTCGCCCTCTTCGCCCTCTTCTCTCCGGCGAAACCAGACGCCGCCCTCATCCGAAACCTCTGCGGCAGAACCGAGCAGCCGGTGATTTGTTCTGCTTGCCTCAATTCCGACTCCGCCAGCCGGACAGCCAATGGGCGTGGACTCGCAGTCATCGCCGTCGGATGTGCGGAGAGGAATACCAGAGCAATGGCCCAGAGGATCGGCGACATTTCCCGTAGAACGCCGAATTCCCCTGTGAAGACGCTGTTGAACGATTGCTGGTTTTCTACAGGGTATGCCGCCGGCAATTTTCCAGGAATCAGAAGTGCGGTCCAAGGAGGAGATTATGCCCGTGCCAGAAACGGCGTGGAGATTTCGATTAGGAATGTCAATAGCTGCTTGGCTGGGTTCGATAAAAACCCTTCGGTCCCGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGCCGTTCAGAGCTGCCGGATTGTTTTGGGGATATTAAACAACATTTAA
Coding sequence (CDS)
ATGCTTCCATTATTTCTCCTCGCCCTCTTCGCCCTCTTCTCTCCGGCGAAACCAGACGCCGCCCTCATCCGAAACCTCTGCGGCAGAACCGAGCAGCCGGTGATTTGTTCTGCTTGCCTCAATTCCGACTCCGCCAGCCGGACAGCCAATGGGCGTGGACTCGCAGTCATCGCCGTCGGATGTGCGGAGAGGAATACCAGAGCAATGGCCCAGAGGATCGGCGACATTTCCCGTAGAACGCCGAATTCCCCTGTGAAGACGCTGTTGAACGATTGCTGGTTTTCTACAGGGTATGCCGCCGGCAATTTTCCAGGAATCAGAAGTGCGGTCCAAGGAGGAGATTATGCCCGTGCCAGAAACGGCGTGGAGATTTCGATTAGGAATGTCAATAGCTGCTTGGCTGGGTTCGATAAAAACCCTTCGGTCCCGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGCCGTTCAGAGCTGCCGGATTGTTTTGGGGATATTAAACAACATTTAA
Protein sequence
MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Homology
BLAST of Csor.00g088220 vs. NCBI nr
Match:
KAG6607897.1 (hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 330 bits (845), Expect = 9.81e-114
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN
Sbjct: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Sbjct: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
BLAST of Csor.00g088220 vs. NCBI nr
Match:
XP_022940751.1 (uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothetical protein SDJN02_01051, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 330 bits (845), Expect = 1.21e-113
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 7 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 66
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN
Sbjct: 67 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 126
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Sbjct: 127 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Csor.00g088220 vs. NCBI nr
Match:
XP_023523451.1 (uncharacterized protein LOC111787665 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 327 bits (837), Expect = 4.98e-112
Identity = 167/169 (98.82%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 33 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 92
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIR+AVQGGDYARARN
Sbjct: 93 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRNAVQGGDYARARN 152
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILN+I
Sbjct: 153 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNHI 201
BLAST of Csor.00g088220 vs. NCBI nr
Match:
XP_022981703.1 (uncharacterized protein LOC111480766 [Cucurbita maxima])
HSP 1 Score: 320 bits (821), Expect = 5.52e-110
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLL++FA FSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 7 MLPLFLLSVFAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 66
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAV+ GDYARARN
Sbjct: 67 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEEGDYARARN 126
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Sbjct: 127 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Csor.00g088220 vs. NCBI nr
Match:
XP_038896712.1 (pectinesterase inhibitor-like [Benincasa hispida])
HSP 1 Score: 232 bits (592), Expect = 4.02e-75
Identity = 117/164 (71.34%), Postives = 135/164 (82.32%), Query Frame = 0
Query: 6 LLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERN 65
++ LFALFSPAKPDAALI NLC +TEQP ICS CLNS S S+TA+G GLA+IA+GCAE+N
Sbjct: 10 IIVLFALFSPAKPDAALIANLCCKTEQPKICSDCLNSGSGSQTADGLGLALIAIGCAEKN 69
Query: 66 TRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEIS 125
T+ MAQR+G + R TP+S +KTLLNDCW STG AAGNFPGI +V GDYA RN +EI+
Sbjct: 70 TKLMAQRLGGLVRSTPDSTLKTLLNDCWLSTGSAAGNFPGIARSVAAGDYAGGRNVLEIT 129
Query: 126 IRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
IRN NSCL F+KNPSVPVPSEVLAGTVAA Q CRI+ ILNNI
Sbjct: 130 IRNANSCLDNFNKNPSVPVPSEVLAGTVAAAQDCRIISEILNNI 173
BLAST of Csor.00g088220 vs. ExPASy TrEMBL
Match:
A0A6J1FJC0 (uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC111446254 PE=4 SV=1)
HSP 1 Score: 330 bits (845), Expect = 5.86e-114
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 7 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 66
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN
Sbjct: 67 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 126
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Sbjct: 127 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Csor.00g088220 vs. ExPASy TrEMBL
Match:
A0A6J1J2U5 (uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766 PE=4 SV=1)
HSP 1 Score: 320 bits (821), Expect = 2.67e-110
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0
Query: 1 MLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 60
MLPLFLL++FA FSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG
Sbjct: 7 MLPLFLLSVFAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVG 66
Query: 61 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARN 120
CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAV+ GDYARARN
Sbjct: 67 CAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEEGDYARARN 126
Query: 121 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI
Sbjct: 127 GVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Csor.00g088220 vs. ExPASy TrEMBL
Match:
A0A5D3DXI0 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001540 PE=4 SV=1)
HSP 1 Score: 228 bits (581), Expect = 9.18e-74
Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 9 LFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERNTRA 68
LFALFSPAKPDAA I NLC +TEQP ICS CLNS S++A+GRGLA+IAVGCAERNT+
Sbjct: 13 LFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLALIAVGCAERNTKL 72
Query: 69 MAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEISIRN 128
MAQR+G++ R TP S +K LLN+CW STGYAAGNFPGI +V GDYA +N +EI+IRN
Sbjct: 73 MAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYASGKNVLEITIRN 132
Query: 129 VNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
VN CL F KNP++PVPSEVLAGTVA Q CRIV ILNNI
Sbjct: 133 VNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of Csor.00g088220 vs. ExPASy TrEMBL
Match:
A0A1S3CK48 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1)
HSP 1 Score: 228 bits (581), Expect = 9.18e-74
Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 9 LFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERNTRA 68
LFALFSPAKPDAA I NLC +TEQP ICS CLNS S++A+GRGLA+IAVGCAERNT+
Sbjct: 13 LFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLALIAVGCAERNTKL 72
Query: 69 MAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEISIRN 128
MAQR+G++ R TP S +K LLN+CW STGYAAGNFPGI +V GDYA +N +EI+IRN
Sbjct: 73 MAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYASGKNVLEITIRN 132
Query: 129 VNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
VN CL F KNP++PVPSEVLAGTVA Q CRIV ILNNI
Sbjct: 133 VNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of Csor.00g088220 vs. ExPASy TrEMBL
Match:
A0A0A0L044 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 SV=1)
HSP 1 Score: 221 bits (564), Expect = 3.55e-71
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 9 LFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAERNTRA 68
LFALFSPAKPDAA I+NLCG+TEQP ICS CLNS S++A GRGLA+IAV CAERNT+
Sbjct: 13 LFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVECAERNTKL 72
Query: 69 MAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVEISIRN 128
MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI +V GDY ++ +EI+IRN
Sbjct: 73 MAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGKSVLEITIRN 132
Query: 129 VNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
VN C+ F KNPS+ VPSEVLAGTVA Q CRIV ILNNI
Sbjct: 133 VNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6607897.1 | 9.81e-114 | 100.00 | hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022940751.1 | 1.21e-113 | 100.00 | uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothet... | [more] |
XP_023523451.1 | 4.98e-112 | 98.82 | uncharacterized protein LOC111787665 [Cucurbita pepo subsp. pepo] | [more] |
XP_022981703.1 | 5.52e-110 | 97.04 | uncharacterized protein LOC111480766 [Cucurbita maxima] | [more] |
XP_038896712.1 | 4.02e-75 | 71.34 | pectinesterase inhibitor-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FJC0 | 5.86e-114 | 100.00 | uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A6J1J2U5 | 2.67e-110 | 97.04 | uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766... | [more] |
A0A5D3DXI0 | 9.18e-74 | 70.19 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3CK48 | 9.18e-74 | 70.19 | pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1 | [more] |
A0A0A0L044 | 3.55e-71 | 68.94 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |