Carg03446 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03446
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MADS-box transcription factor
Location	Carg_Chr20: 1276126 .. 1279498 (+)
RNA-Seq Expression	Carg03446
Synteny	Carg03446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGGTTTGTTTTCTTGAAAATCTTGAAACCCCATCTTCAAAGTTTGAATCTTTAGGTGATTTTGTGGCAGATCTAGTGACCAAAACCAAAACCCATGTCTTATTTTTGTGTGTTCTTTGGTTCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGGTAAGATTGAAATTAAACGAATTGAAAATACCACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGTTTGCTTAAAAAAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGGTTTCACAACTTCAAATTCTTCCTTCAAACACCAAAAAAAATTAATCATTTCTATCTCAGCTGCACAGATCTATGGTTAAAGCTTAGGGTTTAACCTTTATTATTATTATTATTTTTTTTTTTTTGAGGAAATTAATGAATCCATGTTTTTAGGGTTTTTGTTGCCTAAAAATGTCATCCATCTATAATCCGTCACCCTAAGCTGTCTGCCCCAGATGATGGTGTCATCGCCCTCATTATTTCCATTTTTTCACCCTTTTTTCATTACTTTTAATGTTCTTGCTCAACTTCGCTTGCAAAAATCTGATTTTTTTCAAATGGGTTTGTTAGATAGCGTTTGATTTTATCTGGGTTTTTGTTTTTCTTCTTAATTTGTTTTTCTAAGCTTTCAATTTATTATTTTAGCCTCCGATCTTAACAGAATTGCTACAATTCAATTACCGGTGAGCTATGCTCGTTACTTTTTTTTCTTGATAATCAACTCAATTTTTCTTTTTATATGATATTTGCTTTGAATCTTTAGGGTTTAATACAAAACATAATTAATTTCTTATTTAGAGTAGAAATTAATGAATTTCCCACACAAATGATCAAATTATGACCAAAAATTTTAAAAATTAAAAAAAAAAATTGAGAATGGATGAATAGTAATTAGAATAATTAAAAAGATGGAAAATAGTATTTTTTGTGAGTTGTACAATAATTAAATGAATAATATTAATACCATTTTCTTGCAATGTGGAAGGACCATTCTGCCCTCTCAAACTTTAATTTGTAGCATAGAAATAGAAAAAGTTGGTAAATAGCTTCCTCTTCTTCATATTTTCATCCTTTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATACCAATTTAGCTTCAGTCAACTCACTACTGATATTCATATTAATCAAATCCGACAAGAAATTATTGTATTTTCATTATTATTATTATTTTGGGGAAATTTGAAAAATCCCATTTGAAATATTATTGATTTTAGGTTTGGGAGAGTGGAAGGGAAAGTGTGTGTAATTCATTTTCTTTTGCAATGCAAGAGAGAATCATTCTATTTCTATGAAACTTCGATCCTCTCCCCCTTATCACTAATTTAGACCCTTTTTTCCCCTCTCCTTTTAATCATTTTCAAACCCATCAGACCCATTTATGATGCCTCTCATTGATGCAAACAAATAGCTTAAAATCTTTCCACAAGAGCGTCTCGATAAGACGTTTTGTTAGATCTCACCTCCGTTGTAGAGTTTAACTTTCGTTTTAAAATTGTGAAGCTTACGTTGGGCTAAAATAGACAATATTTACTAACAGTATTAAGCTTGAAATTTACGGTTTACGGGTATCTAGGAAGCTTAAATGTAAGAAAATCGTGTTTTAGGGTATAGATTTGTCCGAGAATTGAAGTGATTGAGGAAGAAATTAGGGTTTTGAGTGAGGAGGATTTAGAATTTAGGGTTTCGGGTTTTCGGGTTTCGGGGGAAAATGGAGATTAGGGATTAGGGTAATAGAAAAATGAAGAGAAATATAAAATAATGTGGGATGTTTGTTCACACTGCAATCATGGTCGAGGAAATTAAGGTATCACATGCCACCACCCATGTTCTTGGAATCCCTCGTGTCGGTTTTATTAGGTGTGATTCTCTTTCTTTTAATATATAATATTATATAATATTAAAGTATTTATATAATTATATTTAACATAATGTTTTTAGTTTATCATTAAATTTGTGGGTAATATATTTGTGAATGAATGGTTAAAAATTGAGTACAATTTTTACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGGTAATTACATGTTTTTTTTTTGTTTTTTTTTTATTTTAAGGAACAAAAAAGTTAAAAACACAGATGAACAATTAAATATGAATTTTTTTTTTTTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGTTCGGTTCCGAAAAACACAACAACAAAAAAAGTAACTTTTGTATGAATTTACAGTGTTAATTTCATCTTGCTCAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGTCTCTCCTTTTACTCTATTTCTTCGACGTATTGATATAATTAGATTCAATTCATTACAATCGAGCGTAAGAAAGTCTTTGTGTTCGAATCCCGTAATGTTGTTTTTGCTACGACCCATATTCTAACTCTCCACGTTTCGTGTTAAAATTGTATATATTCATGCGTTTGAGTTCAATAGTGATTTAAAATCTATTCGCATTCAAAATTGACCGTTTTGATTGTGTGTAGAACGAAACCTTGTGTGCAGAGATGGAATTCATGCAAAAAAGGGTACGTATATAACACACAATATATACGAGACTATTTGGAATGATTGTTCAGATACTTAAAAAAAAACGTTTGACTTTTTCTCGGTGTAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGGTCAAATTCTTCACCTTTTCTCCTCGATAACACAAATCCCTCGAAAAGAAAATACTCAATTTATTTCGATTATGTTGATACGTAACATTATTTATAACATCATTCACGTAAATTTAGTTCGGTTTTAATAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

mRNA sequence

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

Coding sequence (CDS)

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

Protein sequence

HTLHQNLIPLFCWCSSLKVELTQISATEFPSQAGEGSASSHKKMGRAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV

Homology

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BLAST of Carg03446 vs. NCBI nr
Match: KAG7010422.1 (Agamous-like MADS-box protein AGL1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448.0 bits (1151), Expect = 5.1e-122
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   HTLHQNLIPLFCWCSSLKVELTQISATEFPSQAGEGSASSHKKMGRAYELSVLCDAEVAL 60
           HTLHQNLIPLFCWCSSLKVELTQISATEFPSQAGEGSASSHKKMGRAYELSVLCDAEVAL
Sbjct: 1   HTLHQNLIPLFCWCSSLKVELTQISATEFPSQAGEGSASSHKKMGRAYELSVLCDAEVAL 60

Query: 61  IVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREI 120
           IVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREI
Sbjct: 61  IVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREI 120

Query: 121 QNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNHNNYLRAQIAEHERIQ 180
           QNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNHNNYLRAQIAEHERIQ
Sbjct: 121 QNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNHNNYLRAQIAEHERIQ 180

Query: 181 QQQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 235
           QQQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 234

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BLAST of Carg03446 vs. NCBI nr
Match: KAG6570568.1 (Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.1 bits (884), Expect = 4.7e-91
Identity = 188/203 (92.61%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
           GVGLMDSDTHYAHQDHLTALQLV
Sbjct: 211 GVGLMDSDTHYAHQDHLTALQLV 233

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BLAST of Carg03446 vs. NCBI nr
Match: XP_022944555.1 (floral homeotic protein AGAMOUS-like [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 2.3e-90
Identity = 187/203 (92.12%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQIAEHERI QQQQQQQTNMMQRGTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIAEHERIPQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
           GVGLMDSDTHYAHQDHLTALQLV
Sbjct: 211 GVGLMDSDTHYAHQDHLTALQLV 233

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BLAST of Carg03446 vs. NCBI nr
Match: XP_038900672.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900675.1 agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86
Identity = 181/203 (89.16%), Postives = 184/203 (90.64%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQR TYETVGG   ++NRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRATYETVGGQYDDQNRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
            VGLMDSDTHYAHQDHLTALQLV
Sbjct: 211 AVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of Carg03446 vs. NCBI nr
Match: XP_023512279.1 (agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-85
Identity = 180/200 (90.00%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYL+AQIAEHERI   QQQQQTNMMQRGTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLQAQIAEHERI---QQQQQTNMMQRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTAL 232
           GVGLMDSDTHYAHQDHLT L
Sbjct: 211 GVGLMDSDTHYAHQDHLTLL 227

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BLAST of Carg03446 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-52
Identity = 127/203 (62.56%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEYANNSVR TIERYKK  +DSSN+G SV+EAN QF
Sbjct: 31  KAYELSVLCDAEVALIVFSSRGRLYEYANNSVRTTIERYKKVCSDSSNTG-SVSEANAQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQN NRHILGEALSSL+ K+LK+LE RLE+GIS++R+KK       
Sbjct: 91  YQQEASKLRRQIRDIQNLNRHILGEALSSLNFKELKNLETRLEKGISRIRSKKNELLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  E+ELQN N +LRAQIAE+ER QQQ      N+M    YE+V    Y ++++  
Sbjct: 151 IEYMQKREIELQNSNLFLRAQIAENERAQQQM-----NLMPGSQYESVPQQPY-DSQNLL 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
            V L+D + HY+  D  TALQLV
Sbjct: 211 PVNLLDPNHHYSRHDQ-TALQLV 225

[Close]

BLAST of Carg03446 vs. ExPASy Swiss-Prot
Match: Q43585 (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 119/204 (58.33%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEYANNSV+ TIERYKKA +DSSN+G S++EAN Q+
Sbjct: 47  KAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTG-SISEANAQY 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+ QI  +QN NR++LGE+L++LSL+DLK+LE ++E+GISK+R+KK       
Sbjct: 107 YQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAE 166

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQ-RGTYETVGGGQYEENRSY 225
                  E++L N+N YLRA+IAE ER QQQQQQQQ N+M    +YE V      + R+Y
Sbjct: 167 IEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNY 226

Query: 226 GGVGLMDSDTHYAHQDHLTALQLV 235
             V  + ++ HY  QD   +LQLV
Sbjct: 227 LQVNGLQTNNHYTRQDQ-PSLQLV 248

[Close]

BLAST of Carg03446 vs. ExPASy Swiss-Prot
Match: P29381 (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.6e-48
Identity = 118/207 (57.00%), Postives = 152/207 (73.43%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   SV EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-SVTEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+LK+LEGRLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEE----N 225
                  EMELQ++N YLRA+IAE  R+     QQ+++++Q  T    G   +++    N
Sbjct: 166 IEYMQKREMELQHNNMYLRAKIAEGARL--NPDQQESSVIQGTTVYESGVSSHDQSQHYN 225

Query: 226 RSYGGVGLMDSDTHYAHQDHLTALQLV 235
           R+Y  V L++ +  ++ QD    LQLV
Sbjct: 226 RNYIPVNLLEPNQQFSGQDQ-PPLQLV 248

[Close]

BLAST of Carg03446 vs. ExPASy Swiss-Prot
Match: P29385 (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-TITEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQN NRHILGE+L SL+ K+LK+LE RLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQ--QQTNMMQRGTYETVGGGQYEENRS 225
                  E+ELQN N YLR++I E   +QQQ+     Q  + + G   +   GQY  NR+
Sbjct: 166 IEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRN 225

Query: 226 YGGVGLMDSDTHYAHQDHLTALQLV 235
           Y  V L++ + + ++QD    LQLV
Sbjct: 226 YIAVNLLEPNQNSSNQDQ-PPLQLV 246

[Close]

BLAST of Carg03446 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45
Identity = 111/203 (54.68%), Postives = 145/203 (71.43%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSV+GTIERYKKA  DS N+  SV+EAN QF
Sbjct: 47  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTS-SVSEANAQF 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRA--------- 165
           YQQEASKL+++I  IQ +NR+++GE+L SL+++DLK LE +LE+GIS++R+         
Sbjct: 107 YQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAE 166

Query: 166 -----KKEMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                KKE++L N+N YLRA+IAE+ER QQ       N+M   +   +   Q  + R+Y 
Sbjct: 167 IEYMQKKEIDLHNNNQYLRAKIAENERAQQHM-----NLMPGSSDYELAPPQSFDGRNYI 226

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
            +  +  + HY+ QD  TALQLV
Sbjct: 227 QLNGLQPNNHYSRQDQ-TALQLV 242

[Close]

BLAST of Carg03446 vs. ExPASy TrEMBL
Match: A0A6J1FYQ9 (floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC111448972 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90
Identity = 187/203 (92.12%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQIAEHERI QQQQQQQTNMMQRGTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIAEHERIPQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
           GVGLMDSDTHYAHQDHLTALQLV
Sbjct: 211 GVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of Carg03446 vs. ExPASy TrEMBL
Match: A0A0A0KC22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 193/257 (75.10%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 23  QISATEFPSQAGEGSASSHKKMGR----------------------------AYELSVLC 82
           +IS TEFP+Q+GEGSASS KKMGR                            AYELSVLC
Sbjct: 61  KISTTEFPNQSGEGSASSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC 120

Query: 83  DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLK 142
           DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLK
Sbjct: 121 DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLK 180

Query: 143 RQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK--------------EM 202
           RQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK              EM
Sbjct: 181 RQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREM 240

Query: 203 ELQNHNNYLRAQIAEHERI-QQQQQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMD 235
           ELQ+HNNYLR QIAEHERI QQQQQQQQTNMMQR TYE+VGG   +ENRS YG VG LMD
Sbjct: 241 ELQSHNNYLRTQIAEHERIQQQQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMD 300

[Close]

BLAST of Carg03446 vs. ExPASy TrEMBL
Match: Q9ARE9 (MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.3e-78
Identity = 175/206 (84.95%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEA+KLKRQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEATKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERI-QQQQQQQQTNMMQRGTYETVGGGQYEENRS- 225
                  EMELQ+HNNYLRAQIAEHERI QQQQQQQQTNMMQR TYE+VGG   +ENRS 
Sbjct: 151 MEFMQKREMELQSHNNYLRAQIAEHERIQQQQQQQQQTNMMQRATYESVGGQYDDENRST 210

Query: 226 YGGVG-LMDSDTHYAHQDHLTALQLV 235
           YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 211 YGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of Carg03446 vs. ExPASy TrEMBL
Match: A0A6J1D8F2 (agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC111017982 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.6e-67
Identity = 160/213 (75.12%), Postives = 167/213 (78.40%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSV EANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVEEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHI+GEALSSLSLKDLKSLEGRLERGI+KVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHIVGEALSSLSLKDLKSLEGRLERGITKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQI EHERI+QQQ Q ++   Q   Y+        ENR YG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIGEHERIRQQQMQYESAATQ---YDE------NENRGYG 210

Query: 226 --------GVGLMDSD-THYAH-QDHLTALQLV 235
                    VGLMDSD  HY H QDHLTALQLV
Sbjct: 211 AAAAVAAAAVGLMDSDNNHYGHAQDHLTALQLV 234

[Close]

BLAST of Carg03446 vs. ExPASy TrEMBL
Match: A0A1S3C3D0 (floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.6e-60
Identity = 143/175 (81.71%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 76  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 135
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 10  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 69

Query: 136 SLKDLKSLEGRLERGISKVRAKK--------------EMELQNHNNYLRAQIAEHERI-Q 195
            LK+LKSLEGRLERGISKVRAKK              E+ELQ+HNNYLRAQIAEHERI Q
Sbjct: 70  PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREVELQSHNNYLRAQIAEHERIQQ 129

Query: 196 QQQQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQL 234
           QQQQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQ+
Sbjct: 130 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQV 184

[Close]

BLAST of Carg03446 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 191.8 bits (486), Expect = 6.1e-49
Identity = 118/207 (57.00%), Postives = 152/207 (73.43%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   SV EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-SVTEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+LK+LEGRLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEE----N 225
                  EMELQ++N YLRA+IAE  R+     QQ+++++Q  T    G   +++    N
Sbjct: 166 IEYMQKREMELQHNNMYLRAKIAEGARL--NPDQQESSVIQGTTVYESGVSSHDQSQHYN 225

Query: 226 RSYGGVGLMDSDTHYAHQDHLTALQLV 235
           R+Y  V L++ +  ++ QD    LQLV
Sbjct: 226 RNYIPVNLLEPNQQFSGQDQ-PPLQLV 248

[Close]

BLAST of Carg03446 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 188.0 bits (476), Expect = 8.9e-48
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-TITEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQN NRHILGE+L SL+ K+LK+LE RLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERIQQQQQQ--QQTNMMQRGTYETVGGGQYEENRS 225
                  E+ELQN N YLR++I E   +QQQ+     Q  + + G   +   GQY  NR+
Sbjct: 166 IEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRN 225

Query: 226 YGGVGLMDSDTHYAHQDHLTALQLV 235
           Y  V L++ + + ++QD    LQLV
Sbjct: 226 YIAVNLLEPNQNSSNQDQ-PPLQLV 246

[Close]

BLAST of Carg03446 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-47
Identity = 115/207 (55.56%), Postives = 147/207 (71.01%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-TITEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAK-------- 165
           YQQEASKL+RQIR+IQN NRHILGE+L SL+ K+LK+LE RLE+GIS+VR+K        
Sbjct: 106 YQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAE 165

Query: 166 --------KEMELQNHNNYLRAQIAEHERIQQQQQQ--QQTNMMQRGTYETVGGGQYEEN 225
                   KE+ELQN N YLR++I E   +QQQ+     Q  + + G   +   GQY  N
Sbjct: 166 IEYMQKRVKEIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--N 225

Query: 226 RSYGGVGLMDSDTHYAHQDHLTALQLV 235
           R+Y  V L++ + + ++QD    LQLV
Sbjct: 226 RNYIAVNLLEPNQNSSNQDQ-PPLQLV 248

[Close]

BLAST of Carg03446 vs. TAIR 10
Match: AT3G58780.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 177.9 bits (450), Expect = 9.2e-45
Identity = 118/232 (50.86%), Postives = 152/232 (65.52%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNS-------------------------VRGT 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNS                         VRGT
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSFIYLLLEKKKKKKKKKNLWIYSSHVVRGT 105

Query: 106 IERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDL 165
           IERYKKA +D+ N   SV EAN Q+YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+L
Sbjct: 106 IERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKEL 165

Query: 166 KSLEGRLERGISKVRAKK--------------EMELQNHNNYLRAQIAEHERIQQQQQQQ 225
           K+LEGRLE+GIS+VR+KK              EMELQ++N YLRA+IAE  R+     QQ
Sbjct: 166 KNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL--NPDQQ 225

Query: 226 QTNMMQRGTYETVGGGQYEE----NRSYGGVGLMDSDTHYAHQDHLTALQLV 235
           +++++Q  T    G   +++    NR+Y  V L++ +  ++ QD    LQLV
Sbjct: 226 ESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQLV 273

[Close]

BLAST of Carg03446 vs. TAIR 10
Match: AT4G09960.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-43
Identity = 91/140 (65.00%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANN++R TIERYKKA +DS+N+  +V E N  +
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTS-TVQEINAAY 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNH 165
           YQQE++KL++QI+ IQNSNR+++G++LSSLS+K+LK +E RLE+ IS++R+KKE+EL N 
Sbjct: 91  YQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKEIELDNE 150

Query: 166 NNYLRAQIAEHERIQQQQQQ 186
           N YLR ++AE ER QQ   Q
Sbjct: 151 NIYLRTKVAEVERYQQHHHQ 169

The following BLAST results are available for this feature:

BLAST of Carg03446 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010422.1	5.1e-122	100.00	Agamous-like MADS-box protein AGL1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6570568.1	4.7e-91	92.61	Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022944555.1	2.3e-90	92.12	floral homeotic protein AGAMOUS-like [Cucurbita moschata]	[more]
XP_038900672.1	3.5e-86	89.16	agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-...	[more]
XP_023512279.1	1.3e-85	90.00	agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg03446 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XH4	5.8e-52	62.56	Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=...	[more]
Q43585	2.4e-50	58.33	Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1	[more]
P29381	8.6e-48	57.00	Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 ...	[more]
P29385	1.2e-46	56.10	Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 ...	[more]
Q40872	2.4e-45	54.68	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]

BLAST of Carg03446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYQ9	1.1e-90	92.12	floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A0A0KC22	1.6e-84	75.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1	[more]
Q9ARE9	1.3e-78	84.95	MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1	[more]
A0A6J1D8F2	6.6e-67	75.12	agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC11101798...	[more]
A0A1S3C3D0	4.6e-60	81.71	floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=...	[more]

BLAST of Carg03446 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58780.1	6.1e-49	57.00	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	8.9e-48	56.10	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	1.5e-47	55.56	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.3	9.2e-45	50.86	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.2	1.7e-43	65.00	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..123
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 45..208
None	No IPR available	PANTHER	PTHR48019:SF103	MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN	coord: 45..208
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 53..74 score: 64.02 coord: 38..53 score: 39.29
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 44..75 e-value: 9.7E-4 score: 22.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 46..72 e-value: 6.5E-10 score: 38.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 44..76 score: 14.759409
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 41..91 e-value: 1.4E-14 score: 55.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 46..88
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 102..192 e-value: 2.8E-18 score: 65.9
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 103..189 score: 12.935104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03446-RA	Carg03446-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding