Carg05407 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGGTCGAGTCATGCAAGCAGTTCGATTTATGAATAGCGGGTCGGAAGTTCAGGCACGGGTCAGGTCGCCCTTTGCTGACGCGACGTGTGTCATCACATGGCGCCAGACATCGTCTCCTTCCATTTTCTGACATGTGGCTCGTACCATGGTCGAACATGCAACCTGTCTTGCTAATCAATTCATGCAAATTTTTATCTAATTTAAGAGTGAGTATTAATGAAAAGCCAAAAATAAAAACCATAAAATTAAGAAATATATTAAATAAATGGAAACTAATTAAATTCTAAACATTTCAACTAAATCTTATCCCAACCATCCTTACAATTTATTTATTTATTTATTATTATTTTGAAATAACAAACTTTTAATTTAATAAATTAAACATTATATTTTATAAATAGTTATATTATTTCATTTTAAATTCTTTTTAATGAAGGGTTGCTCCTTTTCATGAACAGCCATGGTACTTTGTTAGTTTCTTTTCGAACCCTATAAATGCTCATTTTTTTTTTCCATTTTTTTTTACCTTTTCGATCCTCGATCTCCGACATATTCAACCGTTCACTCGACTGCATCGGGAGACCGAGATATTCAGCCATTCACTCAACTGTGTCGGGCGGAGATCGATCGAAGTTTCAGGTCGGAATGGGAGAAAATAGTGTGTGTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGGTGTATTTTGTTTCTGCCGCTGGTGATCGGCTCCGTTCAGCCGCCGTCCGGCCTTATGCTGCTTATTTTTCCGGTCACTCTCGCCGCCGTGTTCTTCCTCCTCTCACGTGCGTCCTCCAATTGA ATGTCGGGTCGAGTCATGCAAGCAGTTCGATTTATGAATAGCGGGTCGGAAGTTCAGGCACGGGTCAGGTCGCCCTTTGCTGACGCGACACCGAGATATTCAGCCATTCACTCAACTGTGTCGGGCGGAGATCGATCGAAGTTTCAGGTCGGAATGGGAGAAAATAGTGTGTGTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGGTGTATTTTGTTTCTGCCGCTGGTGATCGGCTCCGTTCAGCCGCCGTCCGGCCTTATGCTGCTTATTTTTCCGGTCACTCTCGCCGCCGTGTTCTTCCTCCTCTCACGTGCGTCCTCCAATTGA ATGTCGGGTCGAGTCATGCAAGCAGTTCGATTTATGAATAGCGGGTCGGAAGTTCAGGCACGGGTCAGGTCGCCCTTTGCTGACGCGACACCGAGATATTCAGCCATTCACTCAACTGTGTCGGGCGGAGATCGATCGAAGTTTCAGGTCGGAATGGGAGAAAATAGTGTGTGTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGGTGTATTTTGTTTCTGCCGCTGGTGATCGGCTCCGTTCAGCCGCCGTCCGGCCTTATGCTGCTTATTTTTCCGGTCACTCTCGCCGCCGTGTTCTTCCTCCTCTCACGTGCGTCCTCCAATTGA MSGRVMQAVRFMNSGSEVQARVRSPFADATPRYSAIHSTVSGGDRSKFQVGMGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN Homology
BLAST of Carg05407 vs. NCBI nr
Match: KAG7011309.1 (hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Carg05407 vs. NCBI nr
Match: XP_008447644.1 (PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo] >KAA0037855.1 stress response protein nst1 [Cucumis melo var. makuwa] >TYK09825.1 stress response protein nst1 [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of Carg05407 vs. NCBI nr
Match: XP_038888108.1 (uncharacterized protein LOC120078008 [Benincasa hispida]) HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of Carg05407 vs. NCBI nr
Match: XP_011652820.1 (uncharacterized protein LOC105435116 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Carg05407 vs. NCBI nr
Match: KAE8650841.1 (hypothetical protein Csa_017605, partial [Cucumis sativus]) HSP 1 Score: 77.8 bits (190), Expect = 6.6e-11 Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg05407 vs. ExPASy TrEMBL
Match: A0A5A7T8Q7 (Stress response protein nst1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001370 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of Carg05407 vs. ExPASy TrEMBL
Match: A0A1S3BHY2 (uncharacterized protein LOC103490051 OS=Cucumis melo OX=3656 GN=LOC103490051 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of Carg05407 vs. ExPASy TrEMBL
Match: A0A2P5EXP0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_139530 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.1e-07 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Carg05407 vs. ExPASy TrEMBL
Match: A0A2P5C9B1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171750 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.5e-05 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Carg05407 vs. ExPASy TrEMBL
Match: A0A2J6MK22 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X13020 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.9e-05 Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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