Carg05625 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCGTAAGTCTTTGATCCTTTCTGAATAGTTGAATCAGTTCTTTTTTATTCTCATTGTTAGCTCTACTTTAACTTGTGTTCCTGTTTTTGTTGCTGGATTTATCTTTTTGCTACTTTGATTTGTGGTTTATGCTCATTTGACTTGATGATTTGATGATCGTCGTTGGGAGATTTCTGTTTAGATTGGATTTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGAAACGATTCTGTTGTTGCGTTCTTTATTGAAGTCGTGGATGATCTACGGTTTTTCTTTCTGGATTCGTTTTGTTGTTTGAGTATTTGGTTAGATGATCGAGGAGATTCATCGTTCTGGATTCTTGTCCTGTTGTTCTCTTCATGTTTAGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTCGTTTATTGAAGTCATGGATGATCTAGGGTTTTTCTTTCTGGATTCTTTGTTTTGTTGTTTGAGCTTTAGGTTTTATGAGTATATGGTTAGGTGATCGTCAGAAGATTCATCGTTGTTCTCTTCATCTGTTCAAGTGTTTTCTTATACTAACAACCGTTTAATCCGGCCAATGGATGAACAAGGGATTTGTTCTTGTTCATTGGTATTGATTGTATCTGATCCGCTTTGGGGTTTCGATTGATTGGAAGCCATTGATTGTGGGAGTTGGCGTTTAAAGATAAGCCAAGGCTTACTTCTATCCATATTGATTTTGATATCTATGTTGTGTTCCAGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCTCGTGGATGATCTACGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTTTATGAGTATATGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCTCGTGGATGATCTACGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTTTATGAGTATATGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA MFENNPDPIRMRIRDGNIRILAAFPKISINNPYTAERWSHHSLSVLCSSVPSLVDDLRLGLSLYRPDSRLACLDSVVRFYEYMIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF Homology
BLAST of Carg05625 vs. NCBI nr
Match: KAG7015195.1 (Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Carg05625 vs. NCBI nr
Match: KAG6607799.1 (AUGMIN subunit 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247.7 bits (631), Expect = 8.9e-62 Identity = 123/125 (98.40%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Carg05625 vs. NCBI nr
Match: XP_022940170.1 (protein translation factor SUI1 homolog 2-like [Cucurbita moschata] >XP_022981656.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_022981658.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_023525155.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525156.1 protein translation factor SUI1 homolog 2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023525157.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-56 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg05625 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 226.5 bits (576), Expect = 2.1e-55 Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Carg05625 vs. NCBI nr
Match: KAF3453464.1 (hypothetical protein FNV43_RR03904 [Rhamnella rubrinervis]) HSP 1 Score: 220.3 bits (560), Expect = 1.5e-53 Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44 Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44 Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.7e-44 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.7e-44 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy Swiss-Prot
Match: Q0D5W6 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.7e-44 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy TrEMBL
Match: A0A6J1IX56 (protein translation factor SUI1 homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480714 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.7e-56 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy TrEMBL
Match: A0A6J1FPT4 (protein translation factor SUI1 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445876 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.7e-56 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 1.0e-55 Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 2.2e-53 Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg05625 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 2.2e-53 Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg05625 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52 Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of Carg05625 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52 Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of Carg05625 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-45 Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Carg05625 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-45 Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg05625 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 179.1 bits (453), Expect = 3.6e-45 Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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