Homology
BLAST of Carg16686 vs. NCBI nr
Match:
KAG6579446.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016919.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1182.2 bits (3057), Expect = 0.0e+00
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK
Sbjct: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. NCBI nr
Match:
XP_022922292.1 (pentatricopeptide repeat-containing protein At4g22760 [Cucurbita moschata])
HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 572/578 (98.96%), Postives = 575/578 (99.48%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQA QIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQAAQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHS+NPD FSWGCAVRFFS+NGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSRNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDD+TEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDITEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKD VSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDFVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. NCBI nr
Match:
XP_023549917.1 (pentatricopeptide repeat-containing protein At4g22760 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 570/578 (98.62%), Postives = 573/578 (99.13%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQATQIHA IL NGLRNLESCLVRQIT SEF+CARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAQILFNGLRNLESCLVRQITCSEFSCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHS+NPD FSWGCAVRFFSQNGQFMEAISH+VQMQRLGLHPSTFAVSSTLRACGRI CK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSQNGQFMEAISHFVQMQRLGLHPSTFAVSSTLRACGRITCK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. NCBI nr
Match:
XP_022969837.1 (pentatricopeptide repeat-containing protein At4g22760 [Cucurbita maxima])
HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 567/578 (98.10%), Postives = 572/578 (98.96%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQATQIHA ILVNGLRNLESCLVRQITRSEF+ ARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAQILVNGLRNLESCLVRQITRSEFSRARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHS+NPD FSWGCAVRFFSQNGQFME ISHYVQMQRLGLHPSTFAVSSTLRACGRIICK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSQNGQFMETISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F GSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIG LDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGILDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNA+
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAL 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHV+IQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVDIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNI+RAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIKRAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. NCBI nr
Match:
XP_038906935.1 (pentatricopeptide repeat-containing protein At4g22760 [Benincasa hispida])
HSP 1 Score: 1068.1 bits (2761), Expect = 2.6e-308
Identity = 516/577 (89.43%), Postives = 547/577 (94.80%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELK+FLN +N KQATQIHAHILVNGL NLESCLVRQITRSEFTCARIVS YLQ+I
Sbjct: 1 MLASELKVFLNSSINFKQATQIHAHILVNGLPNLESCLVRQITRSEFTCARIVSLYLQQI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L HS+NPD F+W CAVRFFSQNGQFMEAISHYVQMQRLGLHP TFAVSSTLRACGRI+CK
Sbjct: 61 LHHSQNPDAFTWACAVRFFSQNGQFMEAISHYVQMQRLGLHPGTFAVSSTLRACGRIMCK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F GS VHAQVYK GFCRCVYVQTALVDFYSKLGDMGFA+KVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGSYVHAQVYKFGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNL DAQKVFDEMP+KDVISWNSMLTGFANSGNMDRA CLFQQ+GE+SSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPLKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGD+KSARN+FD MPNRNNVSWITLIAGYSKLGEV SA ELF+ MGEKE+LS+NAM
Sbjct: 241 GYVNCGDIKSARNLFDVMPNRNNVSWITLIAGYSKLGEVNSAYELFDKMGEKELLSFNAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQN +PN+AL+LFNQMLQP VNIQPDEMTFASIISACTQLGNLN G WIESYMEKL
Sbjct: 301 IACYSQNSLPNKALELFNQMLQPDVNIQPDEMTFASIISACTQLGNLNCGTWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVD YAKSGNIERAFELFN LKK+DL++YSAMIFGCGINGKA++AIRLF
Sbjct: 361 GIELDDHLATALVDLYAKSGNIERAFELFNGLKKRDLIAYSAMIFGCGINGKAYKAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
+EMLSVNICPNLVTYAGLLT+YNH GLVDEGY+CF SMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 KEMLSVNICPNLVTYAGLLTAYNHGGLVDEGYLCFSSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEA+E+IQSMPVQPNAGVWGALLHAC+LHNNVELGEIAA+N K VTDTTGYRSLLA
Sbjct: 481 GRLEEAYEIIQSMPVQPNAGVWGALLHACKLHNNVELGEIAAQNSLKSVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 578
NIYSS+ERWDDAKRLRKAMGNKVF KISGCSWMEQSE
Sbjct: 541 NIYSSMERWDDAKRLRKAMGNKVFVKISGCSWMEQSE 577
BLAST of Carg16686 vs. ExPASy Swiss-Prot
Match:
P0C8Q5 (Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E6 PE=2 SV=1)
HSP 1 Score: 663.7 bits (1711), Expect = 1.9e-189
Identity = 321/576 (55.73%), Postives = 417/576 (72.40%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
ML S+L+ FL + V ++QA Q+HA ++VN +LE LV Q +R + Y++RI
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L+ D FSWGC VRF SQ+ +F E + Y+ M G+ PS+ AV+S LRACG++
Sbjct: 61 LKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
G +HAQ K G C CVYVQT LV YS+LG + A+K FDD+ EKN VSWNS+L GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
++ G LD+A++VFD++P KD +SWN +++ +A G+M A LF + +S ASWN +I
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNC +MK AR FD MP +N VSWIT+I+GY+KLG+V SA ELF M +K+ L Y+AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACY+QNG P +ALKLF QML+ + IQPDE+T +S++SA +QLGN ++G W+ESY+ +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GI++DD L+T+L+D Y K G+ +AF++F++L KKD VSYSAMI GCGING A EA LF
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
M+ I PN+VT+ GLL++Y+H+GLV EGY CF SMKDH LEP ADHYGIMVD+LGRA
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEA+ELI+SMP+QPNAGVWGALL A LHNNVE GEIA +C KL TD TGY S LA
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQS 577
IYSSV RWDDA+ +R ++ K K GCSW+E S
Sbjct: 541 MIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEGS 576
BLAST of Carg16686 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 379.0 bits (972), Expect = 9.4e-104
Identity = 214/570 (37.54%), Postives = 322/570 (56.49%), Query Frame = 0
Query: 10 LNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDY 69
L K N+ Q Q+HA I+ L + + ++ + C + + R+ + P+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHE-DLHIAPKLISALSLCRQ--TNLAVRVFNQVQEPNV 85
Query: 70 FSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICKFSGSSVHAQ 129
+R +QN Q +A + +MQR GL F L+AC +H
Sbjct: 86 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 145
Query: 130 VYKLGFCRCVYVQTALVDFYSKLGDMGF--ARKVFDDMTEKNVVSWNSILSGYVKIGNLD 189
+ KLG +YV AL+D YS+ G +G A K+F+ M+E++ VSWNS+L G VK G L
Sbjct: 146 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 205
Query: 190 DAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMISGYVNCGD 249
DA+++FDEMP +D+ISWN+ML G+A M +A LF+++ ER++ SW+ M+ GY GD
Sbjct: 206 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 265
Query: 250 MKSARNMFDEM--PNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYS 309
M+ AR MFD+M P +N V+W +IAG Y+
Sbjct: 266 MEMARVMFDKMPLPAKNVVTWTIIIAG-------------------------------YA 325
Query: 310 QNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKLGIELD 369
+ G+ EA +L +QM+ ++ D SI++ACT+ G L+ G I S +++ + +
Sbjct: 326 EKGLLKEADRLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 385
Query: 370 DHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLS 429
++ AL+D YAK GN+++AF++FND+ KKDLVS++ M+ G G++G EAI LF M
Sbjct: 386 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 445
Query: 430 VNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSM-KDHGLEPLADHYGIMVDLLGRAGRLE 489
I P+ VT+ +L S NHAGL+DEG F SM K + L P +HYG +VDLLGR GRL+
Sbjct: 446 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 505
Query: 490 EAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYS 549
EA +++Q+MP++PN +WGALL ACR+HN V++ + N KL G SLL+NIY+
Sbjct: 506 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 559
Query: 550 SVERWDDAKRLRKAMGNKVFAKISGCSWME 575
+ E W+ +R M + K SG S +E
Sbjct: 566 AAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
BLAST of Carg16686 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 4.8e-100
Identity = 217/593 (36.59%), Postives = 322/593 (54.30%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQ-- 60
+L + L L K + QI A +++NGL R I CA SRYL
Sbjct: 51 VLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIA----FCALSESRYLDYS 110
Query: 61 -RILRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGL---HPSTFAVSSTLRAC 120
+IL+ +NP+ FSW +R FS++ E+ Y QM R G P F + C
Sbjct: 111 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 170
Query: 121 GRIICKFSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWN 180
+ G + V KL +V A + ++ GDM ARKVFD+ +++VSWN
Sbjct: 171 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 230
Query: 181 SILSGYVKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANS----GNMDRASCLFQQLGER 240
+++GY KIG + A V+ M + V + + G +S G+++R ++ + E
Sbjct: 231 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 290
Query: 241 SSASW----NAMISGYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELF 300
NA++ + CGD+ AR +FD + R VSW T+I+GY++ G + + +LF
Sbjct: 291 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 350
Query: 301 NNMGEKEILSYNAMIACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGN 360
++M EK+++ +NAMI Q +AL LF +M N +PDE+T +SAC+QLG
Sbjct: 351 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSACSQLGA 410
Query: 361 LNYGAWIESYMEKLGIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFG 420
L+ G WI Y+EK + L+ L T+LVD YAK GNI A +F+ ++ ++ ++Y+A+I G
Sbjct: 411 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 470
Query: 421 CGINGKAFEAIRLFEEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDH-GLEP 480
++G A AI F EM+ I P+ +T+ GLL++ H G++ G F MK L P
Sbjct: 471 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 530
Query: 481 LADHYGIMVDLLGRAGRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNC 540
HY IMVDLLGRAG LEEA L++SMP++ +A VWGALL CR+H NVELGE AA+
Sbjct: 531 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 590
Query: 541 SKLVTDTTGYRSLLANIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
+L +G LL +Y W+DAKR R+ M + KI GCS +E + I
Sbjct: 591 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
BLAST of Carg16686 vs. ExPASy Swiss-Prot
Match:
Q9FHR3 (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E37 PE=3 SV=1)
HSP 1 Score: 361.7 bits (927), Expect = 1.6e-98
Identity = 198/558 (35.48%), Postives = 312/558 (55.91%), Query Frame = 0
Query: 21 QIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDYFSWGCAVRFFS 80
QIHA I+ GL ++ + I+ S + + + Y + +P + W ++ +S
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSL--SYSSSVFERVPSPGTYLWNHLIKGYS 87
Query: 81 QNGQFMEAISHYVQMQRLGL-HPSTFAVSSTLRACGRIICKFSGSSVHAQVYKLGFCRCV 140
F E +S ++M R GL P + ++ C GSSVH V ++GF + V
Sbjct: 88 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 147
Query: 141 YVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGYVKIGNLDDAQKVFDEMPVK 200
V T+ VDFY K D+ ARKVF +M E+N VSW +++ YVK G L++A+ +FD MP
Sbjct: 148 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMP-- 207
Query: 201 DVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMISGYVNCGDMKSARNMFDEMP 260
ER+ SWNA++ G V GD+ +A+ +FDEMP
Sbjct: 208 -----------------------------ERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 267
Query: 261 NRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYSQNGMPNEALKLFNQ 320
R+ +S+ ++I GY+K G++ SA +LF ++ +++A+I Y+QNG PNEA K+F++
Sbjct: 268 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 327
Query: 321 MLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKLGIELDDH-LATALVDFYAK 380
M N++PDE ++SAC+Q+G ++SY+ + + H + AL+D AK
Sbjct: 328 MCAK--NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 387
Query: 381 SGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLSVNICPNLVTYAGL 440
G+++RA +LF ++ ++DLVSY +M+ G I+G EAIRLFE+M+ I P+ V + +
Sbjct: 388 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 447
Query: 441 LTSYNHAGLVDEGYVCF-LSMKDHGLEPLADHYGIMVDLLGRAGRLEEAHELIQSMPVQP 500
L + LV+EG F L K + + DHY +V+LL R G+L+EA+ELI+SMP +
Sbjct: 448 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 507
Query: 501 NAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYSSVERWDDAKRLRK 560
+A WG+LL C LH N E+ E+ AR+ +L + G LL+NIY++++RW D LR
Sbjct: 508 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 550
Query: 561 AMGNKVFAKISGCSWMEQ 576
M KI G SW+ +
Sbjct: 568 KMNENGITKICGRSWISR 550
BLAST of Carg16686 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 5.0e-97
Identity = 195/564 (34.57%), Postives = 321/564 (56.91%), Query Frame = 0
Query: 22 IHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDYFSWGCAVRFFSQ 81
IHA ++ GL N L + I + Y + + + P+ W R +
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 82 NGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICKFSGSSVHAQVYKLGFCRCVYV 141
+ + A+ YV M LGL P+++ L++C + G +H V KLG +YV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 142 QTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGYVKIGNLDDAQKVFDEMPVKDV 201
T+L+ Y + G + A KVFD ++VVS+ +++ GY G +++AQK+FDE+PVKDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 202 ISWNSMLTGFANSGNMDRASCLFQQLGERS----SASWNAMISGYVNCGDMKSARNM--- 261
+SWN+M++G+A +GN A LF+ + + + ++ ++S G ++ R +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 262 FDEMPNRNNVSWI-TLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYSQNGMPNEA 321
D+ +N+ + LI YSK GE+ +AC LF + K+++S+N +I Y+ + EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 322 LKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEK--LGIELDDHLATA 381
L LF +ML+ P+++T SI+ AC LG ++ G WI Y++K G+ L T+
Sbjct: 352 LLLFQEMLRS--GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 411
Query: 382 LVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLSVNICPN 441
L+D YAK G+IE A ++FN + K L S++AMIFG ++G+A + LF M + I P+
Sbjct: 412 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 471
Query: 442 LVTYAGLLTSYNHAGLVDEGYVCFLSM-KDHGLEPLADHYGIMVDLLGRAGRLEEAHELI 501
+T+ GLL++ +H+G++D G F +M +D+ + P +HYG M+DLLG +G +EA E+I
Sbjct: 472 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 531
Query: 502 QSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYSSVERWD 561
M ++P+ +W +LL AC++H NVELGE A N K+ + G LL+NIY+S RW+
Sbjct: 532 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 591
Query: 562 DAKRLRKAMGNKVFAKISGCSWME 575
+ + R + +K K+ GCS +E
Sbjct: 592 EVAKTRALLNDKGMKKVPGCSSIE 613
BLAST of Carg16686 vs. ExPASy TrEMBL
Match:
A0A6J1E2U4 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita moschata OX=3662 GN=LOC111430313 PE=4 SV=1)
HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 572/578 (98.96%), Postives = 575/578 (99.48%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQA QIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQAAQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHS+NPD FSWGCAVRFFS+NGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSRNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDD+TEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDITEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKD VSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDFVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. ExPASy TrEMBL
Match:
A0A6J1HXF1 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita maxima OX=3661 GN=LOC111468920 PE=4 SV=1)
HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 567/578 (98.10%), Postives = 572/578 (98.96%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
MLASELKIFLNKPVNVKQATQIHA ILVNGLRNLESCLVRQITRSEF+ ARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAQILVNGLRNLESCLVRQITRSEFSRARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
LRHS+NPD FSWGCAVRFFSQNGQFME ISHYVQMQRLGLHPSTFAVSSTLRACGRIICK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSQNGQFMETISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F GSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIG LDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS
Sbjct: 181 VKIGILDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNA+
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAL 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACYSQNGMPNEALKLFNQMLQPHV+IQPDEMTFASIISACTQLGNLNYGAWIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVDIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GIELDDHLATALVDFYAKSGNI+RAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIKRAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 578
BLAST of Carg16686 vs. ExPASy TrEMBL
Match:
A0A1S3ATB6 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucumis melo OX=3656 GN=LOC103482665 PE=4 SV=1)
HSP 1 Score: 1057.0 bits (2732), Expect = 2.9e-305
Identity = 511/579 (88.26%), Postives = 547/579 (94.47%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
ML S+LK FLN V+VKQATQIHAHILVNGL NLESCLVRQITRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L HS+NPD F+W CAVRFFS+NGQFMEAI+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F G +HAQVYKLGFCRCVYVQT+LVDFYSKLGDMGFA+KVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNL DAQKVFDEMPVKDVISWNSMLTGF+NSGNMDRA CLFQQ+ E+SSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMG--EKEILSYN 300
GYVNCGDMK+ARN+FD MPNRNNV+ ITLIAGYSKLGEV SACELF+ MG EKE+ S+N
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 301 AMIACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYME 360
AMIACYSQNG+PN+AL+LFNQMLQPH+NIQPDEMTFAS+ISACTQLGNL+YG WIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 361 KLGIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIR 420
KLGIELDDHLATALVD YAKSGNI+RAFELFNDLKK+DLV+YSAMIFGCGINGKA EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 421 LFEEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLG 480
LF+EML VNI PNLVTYAGLLT+YNHAGLVDEGY CF SMKDHGL PLADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 481 RAGRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSL 540
RAGRLEEA+ELI+SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSK VTDTTGYRSL
Sbjct: 481 RAGRLEEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 541 LANIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 578
LANIYSS+ERWDDAKR+RKAM NKVFAKISGCSWMEQSE
Sbjct: 541 LANIYSSMERWDDAKRMRKAMSNKVFAKISGCSWMEQSE 579
BLAST of Carg16686 vs. ExPASy TrEMBL
Match:
A0A5A7THR1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003540 PE=4 SV=1)
HSP 1 Score: 1053.1 bits (2722), Expect = 4.1e-304
Identity = 509/579 (87.91%), Postives = 546/579 (94.30%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
ML S+LK FLN V+VKQATQIHAHILVNGL NLESCLVRQITRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L HS+NPD F+W CAVRFFS+NGQFMEAI+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F G +HAQVYKLGFCRCVYVQT+LVDFYSKLGDMGFA+KVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNL DAQKVFDEMPVKDVISWNSMLTGF+NSGNMDRA CLFQQ+ E+SSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMG--EKEILSYN 300
GYVNCGDMK+ARN+FD MPNRNNV+ ITLIAGYSKLGEV SACELF+ MG EKE+ S+N
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 301 AMIACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYME 360
AMIACYSQNG+PN+AL+LFNQMLQPH+NIQPDEMTFAS+ISACTQLGNL+YG WIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 361 KLGIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIR 420
KLGIELDDHLATALVD YAKSGNI+RAFELFNDLKK+DLV+YSAMIFGCGINGKA EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 421 LFEEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLG 480
LF+EML VNI PNLVTYAGLLT+YNHAGLVDEGY CF SMKDHGL PLADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 481 RAGRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSL 540
RAGRL+EA+ELI+SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSK VTDTTGYRSL
Sbjct: 481 RAGRLKEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 541 LANIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 578
LANIYSS+ERWDDAK +RKAM NKVFAKISGCSWMEQSE
Sbjct: 541 LANIYSSMERWDDAKSMRKAMSNKVFAKISGCSWMEQSE 579
BLAST of Carg16686 vs. ExPASy TrEMBL
Match:
A0A0A0KR38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157980 PE=4 SV=1)
HSP 1 Score: 1051.2 bits (2717), Expect = 1.6e-303
Identity = 509/579 (87.91%), Postives = 543/579 (93.78%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
ML S+LK FLN V+VKQATQIHA ILVNGL NLESCLVRQITRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAQILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L HS+NPD F+W CAVRFFSQNGQFMEAI+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LHHSRNPDAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
F G +HAQVYKLGFCRCVYVQTALVDFYSKLGDMGFA+KVFD+MTEKNVVSWNSILSGY
Sbjct: 121 FRGWCIHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
VKIGNL DAQK+FDEMPVKD ISWNSMLTGF+NSGNMDRA CLFQQ+GE+SSASWNAMI
Sbjct: 181 VKIGNLVDAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGEKSSASWNAMIG 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNM--GEKEILSYN 300
GYVNCGDMK+ARN+FD MPNRNNV+ ITLIAGYSKLGEV SA ELF+ M EKE+LS+N
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFN 300
Query: 301 AMIACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYME 360
AMIACYSQN MPN+AL+LFN MLQPHVNIQPDEMTFAS+ISACTQLGNL+YG WIESYME
Sbjct: 301 AMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 361 KLGIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIR 420
KLGIELDDHLATALVD YAKSGNI RAFELFN LKK+DLV+YSAMIFGCGIN KA EAIR
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAIR 420
Query: 421 LFEEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLG 480
LF+EML VNICPNLVTYAGLLT+YNHAGLVDEGY+CF SMKDHGL PLADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 481 RAGRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSL 540
RAGRLEEA+ELI SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSKLVTDTTGYRSL
Sbjct: 481 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYRSL 540
Query: 541 LANIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 578
LANIYSS+ERWDDAKR+RKAMGNK+FAKISGCSWMEQSE
Sbjct: 541 LANIYSSMERWDDAKRMRKAMGNKIFAKISGCSWMEQSE 579
BLAST of Carg16686 vs. TAIR 10
Match:
AT4G22760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 663.7 bits (1711), Expect = 1.4e-190
Identity = 321/576 (55.73%), Postives = 417/576 (72.40%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
ML S+L+ FL + V ++QA Q+HA ++VN +LE LV Q +R + Y++RI
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
L+ D FSWGC VRF SQ+ +F E + Y+ M G+ PS+ AV+S LRACG++
Sbjct: 61 LKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
G +HAQ K G C CVYVQT LV YS+LG + A+K FDD+ EKN VSWNS+L GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
++ G LD+A++VFD++P KD +SWN +++ +A G+M A LF + +S ASWN +I
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
GYVNC +MK AR FD MP +N VSWIT+I+GY+KLG+V SA ELF M +K+ L Y+AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
IACY+QNG P +ALKLF QML+ + IQPDE+T +S++SA +QLGN ++G W+ESY+ +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
GI++DD L+T+L+D Y K G+ +AF++F++L KKD VSYSAMI GCGING A EA LF
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
M+ I PN+VT+ GLL++Y+H+GLV EGY CF SMKDH LEP ADHYGIMVD+LGRA
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
GRLEEA+ELI+SMP+QPNAGVWGALL A LHNNVE GEIA +C KL TD TGY S LA
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQS 577
IYSSV RWDDA+ +R ++ K K GCSW+E S
Sbjct: 541 MIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEGS 576
BLAST of Carg16686 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 379.0 bits (972), Expect = 6.7e-105
Identity = 214/570 (37.54%), Postives = 322/570 (56.49%), Query Frame = 0
Query: 10 LNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDY 69
L K N+ Q Q+HA I+ L + + ++ + C + + R+ + P+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHE-DLHIAPKLISALSLCRQ--TNLAVRVFNQVQEPNV 85
Query: 70 FSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICKFSGSSVHAQ 129
+R +QN Q +A + +MQR GL F L+AC +H
Sbjct: 86 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 145
Query: 130 VYKLGFCRCVYVQTALVDFYSKLGDMGF--ARKVFDDMTEKNVVSWNSILSGYVKIGNLD 189
+ KLG +YV AL+D YS+ G +G A K+F+ M+E++ VSWNS+L G VK G L
Sbjct: 146 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 205
Query: 190 DAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMISGYVNCGD 249
DA+++FDEMP +D+ISWN+ML G+A M +A LF+++ ER++ SW+ M+ GY GD
Sbjct: 206 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 265
Query: 250 MKSARNMFDEM--PNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYS 309
M+ AR MFD+M P +N V+W +IAG Y+
Sbjct: 266 MEMARVMFDKMPLPAKNVVTWTIIIAG-------------------------------YA 325
Query: 310 QNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKLGIELD 369
+ G+ EA +L +QM+ ++ D SI++ACT+ G L+ G I S +++ + +
Sbjct: 326 EKGLLKEADRLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 385
Query: 370 DHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLS 429
++ AL+D YAK GN+++AF++FND+ KKDLVS++ M+ G G++G EAI LF M
Sbjct: 386 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 445
Query: 430 VNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSM-KDHGLEPLADHYGIMVDLLGRAGRLE 489
I P+ VT+ +L S NHAGL+DEG F SM K + L P +HYG +VDLLGR GRL+
Sbjct: 446 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 505
Query: 490 EAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYS 549
EA +++Q+MP++PN +WGALL ACR+HN V++ + N KL G SLL+NIY+
Sbjct: 506 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 559
Query: 550 SVERWDDAKRLRKAMGNKVFAKISGCSWME 575
+ E W+ +R M + K SG S +E
Sbjct: 566 AAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
BLAST of Carg16686 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 366.7 bits (940), Expect = 3.4e-101
Identity = 217/593 (36.59%), Postives = 322/593 (54.30%), Query Frame = 0
Query: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQ-- 60
+L + L L K + QI A +++NGL R I CA SRYL
Sbjct: 51 VLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIA----FCALSESRYLDYS 110
Query: 61 -RILRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGL---HPSTFAVSSTLRAC 120
+IL+ +NP+ FSW +R FS++ E+ Y QM R G P F + C
Sbjct: 111 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 170
Query: 121 GRIICKFSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWN 180
+ G + V KL +V A + ++ GDM ARKVFD+ +++VSWN
Sbjct: 171 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 230
Query: 181 SILSGYVKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANS----GNMDRASCLFQQLGER 240
+++GY KIG + A V+ M + V + + G +S G+++R ++ + E
Sbjct: 231 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 290
Query: 241 SSASW----NAMISGYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELF 300
NA++ + CGD+ AR +FD + R VSW T+I+GY++ G + + +LF
Sbjct: 291 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 350
Query: 301 NNMGEKEILSYNAMIACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGN 360
++M EK+++ +NAMI Q +AL LF +M N +PDE+T +SAC+QLG
Sbjct: 351 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSACSQLGA 410
Query: 361 LNYGAWIESYMEKLGIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFG 420
L+ G WI Y+EK + L+ L T+LVD YAK GNI A +F+ ++ ++ ++Y+A+I G
Sbjct: 411 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 470
Query: 421 CGINGKAFEAIRLFEEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDH-GLEP 480
++G A AI F EM+ I P+ +T+ GLL++ H G++ G F MK L P
Sbjct: 471 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 530
Query: 481 LADHYGIMVDLLGRAGRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNC 540
HY IMVDLLGRAG LEEA L++SMP++ +A VWGALL CR+H NVELGE AA+
Sbjct: 531 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 590
Query: 541 SKLVTDTTGYRSLLANIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSEI 579
+L +G LL +Y W+DAKR R+ M + KI GCS +E + I
Sbjct: 591 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
BLAST of Carg16686 vs. TAIR 10
Match:
AT5G37570.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 361.7 bits (927), Expect = 1.1e-99
Identity = 198/558 (35.48%), Postives = 312/558 (55.91%), Query Frame = 0
Query: 21 QIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDYFSWGCAVRFFS 80
QIHA I+ GL ++ + I+ S + + + Y + +P + W ++ +S
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSL--SYSSSVFERVPSPGTYLWNHLIKGYS 87
Query: 81 QNGQFMEAISHYVQMQRLGL-HPSTFAVSSTLRACGRIICKFSGSSVHAQVYKLGFCRCV 140
F E +S ++M R GL P + ++ C GSSVH V ++GF + V
Sbjct: 88 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 147
Query: 141 YVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGYVKIGNLDDAQKVFDEMPVK 200
V T+ VDFY K D+ ARKVF +M E+N VSW +++ YVK G L++A+ +FD MP
Sbjct: 148 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMP-- 207
Query: 201 DVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMISGYVNCGDMKSARNMFDEMP 260
ER+ SWNA++ G V GD+ +A+ +FDEMP
Sbjct: 208 -----------------------------ERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 267
Query: 261 NRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYSQNGMPNEALKLFNQ 320
R+ +S+ ++I GY+K G++ SA +LF ++ +++A+I Y+QNG PNEA K+F++
Sbjct: 268 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 327
Query: 321 MLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKLGIELDDH-LATALVDFYAK 380
M N++PDE ++SAC+Q+G ++SY+ + + H + AL+D AK
Sbjct: 328 MCAK--NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 387
Query: 381 SGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLSVNICPNLVTYAGL 440
G+++RA +LF ++ ++DLVSY +M+ G I+G EAIRLFE+M+ I P+ V + +
Sbjct: 388 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 447
Query: 441 LTSYNHAGLVDEGYVCF-LSMKDHGLEPLADHYGIMVDLLGRAGRLEEAHELIQSMPVQP 500
L + LV+EG F L K + + DHY +V+LL R G+L+EA+ELI+SMP +
Sbjct: 448 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 507
Query: 501 NAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYSSVERWDDAKRLRK 560
+A WG+LL C LH N E+ E+ AR+ +L + G LL+NIY++++RW D LR
Sbjct: 508 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 550
Query: 561 AMGNKVFAKISGCSWMEQ 576
M KI G SW+ +
Sbjct: 568 KMNENGITKICGRSWISR 550
BLAST of Carg16686 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 356.7 bits (914), Expect = 3.6e-98
Identity = 195/564 (34.57%), Postives = 321/564 (56.91%), Query Frame = 0
Query: 22 IHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRILRHSKNPDYFSWGCAVRFFSQ 81
IHA ++ GL N L + I + Y + + + P+ W R +
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 82 NGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICKFSGSSVHAQVYKLGFCRCVYV 141
+ + A+ YV M LGL P+++ L++C + G +H V KLG +YV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 142 QTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGYVKIGNLDDAQKVFDEMPVKDV 201
T+L+ Y + G + A KVFD ++VVS+ +++ GY G +++AQK+FDE+PVKDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 202 ISWNSMLTGFANSGNMDRASCLFQQLGERS----SASWNAMISGYVNCGDMKSARNM--- 261
+SWN+M++G+A +GN A LF+ + + + ++ ++S G ++ R +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 262 FDEMPNRNNVSWI-TLIAGYSKLGEVGSACELFNNMGEKEILSYNAMIACYSQNGMPNEA 321
D+ +N+ + LI YSK GE+ +AC LF + K+++S+N +I Y+ + EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 322 LKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEK--LGIELDDHLATA 381
L LF +ML+ P+++T SI+ AC LG ++ G WI Y++K G+ L T+
Sbjct: 352 LLLFQEMLRS--GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 411
Query: 382 LVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLFEEMLSVNICPN 441
L+D YAK G+IE A ++FN + K L S++AMIFG ++G+A + LF M + I P+
Sbjct: 412 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 471
Query: 442 LVTYAGLLTSYNHAGLVDEGYVCFLSM-KDHGLEPLADHYGIMVDLLGRAGRLEEAHELI 501
+T+ GLL++ +H+G++D G F +M +D+ + P +HYG M+DLLG +G +EA E+I
Sbjct: 472 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 531
Query: 502 QSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYSSVERWD 561
M ++P+ +W +LL AC++H NVELGE A N K+ + G LL+NIY+S RW+
Sbjct: 532 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 591
Query: 562 DAKRLRKAMGNKVFAKISGCSWME 575
+ + R + +K K+ GCS +E
Sbjct: 592 EVAKTRALLNDKGMKKVPGCSSIE 613
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6579446.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022922292.1 | 0.0e+00 | 98.96 | pentatricopeptide repeat-containing protein At4g22760 [Cucurbita moschata] | [more] |
XP_023549917.1 | 0.0e+00 | 98.62 | pentatricopeptide repeat-containing protein At4g22760 [Cucurbita pepo subsp. pep... | [more] |
XP_022969837.1 | 0.0e+00 | 98.10 | pentatricopeptide repeat-containing protein At4g22760 [Cucurbita maxima] | [more] |
XP_038906935.1 | 2.6e-308 | 89.43 | pentatricopeptide repeat-containing protein At4g22760 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
P0C8Q5 | 1.9e-189 | 55.73 | Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX... | [more] |
Q9LS72 | 9.4e-104 | 37.54 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 4.8e-100 | 36.59 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9FHR3 | 1.6e-98 | 35.48 | Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis th... | [more] |
Q9LN01 | 5.0e-97 | 34.57 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E2U4 | 0.0e+00 | 98.96 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HXF1 | 0.0e+00 | 98.10 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita maxima OX=366... | [more] |
A0A1S3ATB6 | 2.9e-305 | 88.26 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5A7THR1 | 4.1e-304 | 87.91 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0KR38 | 1.6e-303 | 87.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157980 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G22760.1 | 1.4e-190 | 55.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 6.7e-105 | 37.54 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G22410.1 | 3.4e-101 | 36.59 | SLOW GROWTH 1 | [more] |
AT5G37570.1 | 1.1e-99 | 35.48 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G08070.1 | 3.6e-98 | 34.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |