Carg03680 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTGACATTTCTTCTTTCTCTCTCTATCGATTCTTCATTTCTATATACGATTTACCCCGATGTTTCTCTTTCTGTGTCTACGATTGACCCGATTGTACGTTATCAGATTAAAATTTCAAGTTGTTAACCTGAACGTAGCTCTCTAGTTTAAGACATGTCTCGGTCAAAAGTGTGAATTCTTCCTTGTTGAACAAAAAAAAAACTTTTTTTGAGTTGGGTTATTGTCTGTTTTGACCCGTTATGTATCACTGTTAGCTTTACGTTTTTAAAACGAGTTTGTTAGGGAGAGATTTTCACATCCTTATAAATAATGTTTCGTTCTTCTTTTCAATCGACGTGGGATCTCACAATCCACCCCTTTCAAGACCCAATATCCTCGTTGGCACACTGCTAAGTGCCTAGCTCTAATACTATTTGTAAAAGTATAGACCTACTGCTAATAGATGTTTGTTTTGACTCGTTACATATTGACGTTAGTCTCACGATTTTAAAATGCGTTTGTTAGGGAGAGGTTTCCACACCTTTATAGGGAATGTTTCGTTCCCCTCTTCAAATGATGTGAGACCTTATGCTACTCATACCTCAATTAGTCAAGACAGTATATCTTGAAGAAATTATTAAATTTATTATAATCTTTCATTCACCAATTTAAGTATAGATCAGTTACTCTGGTAGCGGGTAAGTTTTGAGAAATTATTGAAATATGTTCTCTCATCTCTCAATGATTTCATTTCATTTTTTCTTGTTTCAGGTTATGACAGACCCAGATGTTCCAGGACCGAGTGATCCTTATTTAAGAGAGCATTTACACTGGTAACTTTTTTTTTAACTAAAATTCACACTGGTAATTAAACATTTACAGTGTTACTGTCACAGTTACATTACAAATATTGCATGTGCATGAAACCCACCAAATTTGACTTGACAAGAATTAATACTGAGAGAATCGTTGTCGTGTTTTATTGTCGTTGGAGGATGAAATTCTCTTGGATTTTAGCGAATTTTGCTTATTTATTTTTCTTTCATTTTCATTTTCATGTAAACTAAATCAAATAACTTTTAATATAACCTATGGTTTGTCTTTTACATTTATTATAAGATATTTAAAAAAAAATACCACTATTATATAGTTGGAACTTGGAAGATCAGCATAATTAGTGGACTGGATTCCTTTGGTGTCTTAATTTAGACCAAATTTGTCAACTTTAAGCTTAATTTCAATTTTAGAAAAATTTAATACATGTCTTATTCAATATATATTGAGATGTCTTGAAGCCCTTCCATCCACGAGCAATATCATGACTATATTATTAGATAAATCTCTATTAATAAACTGATGTTTTGATTTTGAAACTATACTGTGCATTCACGTGCAGTACGATAAGAAACCACGTAGTTGTTAATGAAAGTTTTATTTGTTTGAATAATTATCCATTGATTTGTGTTAGTTTGTAAACTTTTAATATAATTTATCCAATATTGTATTGAATAATTATGCAGGATAGAAAATAAATAAATAATTTAACAACCGAACCAAAATAAAGAGGTGGATTGAGTTAGGTTGTGAAAAATTTCGAGTTGGGTTGGGTTACCAATCCAACCAACCTCAACTTTTGAGTTGATCCAAAAAACTCTCTCGACCCAACTCAACCCGACCCATTACACCCCTAATATTGCTTATATATATGTTAGTGTTTACGGTGCCTTGTGATAAGGAACTACCTAGGCTAGCAGCTAACTCCGATATGTAAAAGGTTCGTTTTTGTTCTGTTCAAACAGAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTTATGACAGACCCAGATAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA ATGGCAAGAAGTGTGTCTTCGGAGCCTCTTGTTGTTGGGAGAGTGATCGGAGATGTGCTTGATCCCTTCACCCAAAGCATGAAGATGACTGTTTCTTACAACAATAAGCAAGTCTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAAGGCTGAAATCCTTGGTGGTGACTTGAGATCTTTCTTCACTTTGGTTATGACAGACCCAGATAAGCGAAGACAAACGGTGAGCGCACCCTCTTCAAGGGACCATTTCAGCACACGAATCTTCGCTGCCGAAAACGACCTCGGCGACCCCGTTGCTGCCGTCTACTTCAATGCTCAGAGAGAAACTGCCGCCAGACGACGCTAA MARSVSSEPLVVGRVIGDVLDPFTQSMKMTVSYNNKQVFNGHEFFPSAVAAKPKAEILGGDLRSFFTLVMTDPDKRRQTVSAPSSRDHFSTRIFAAENDLGDPVAAVYFNAQRETAARRR Homology
BLAST of Carg03680 vs. NCBI nr
Match: KAG7017448.1 (Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg03680 vs. NCBI nr
Match: KAG6580691.1 (Protein SELF-PRUNING, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52 Identity = 120/174 (68.97%), Postives = 120/174 (68.97%), Query Frame = 0
BLAST of Carg03680 vs. NCBI nr
Match: XP_023528346.1 (protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52 Identity = 119/174 (68.39%), Postives = 120/174 (68.97%), Query Frame = 0
BLAST of Carg03680 vs. NCBI nr
Match: XP_022935180.1 (protein SELF-PRUNING-like [Cucurbita moschata]) HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51 Identity = 118/174 (67.82%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of Carg03680 vs. NCBI nr
Match: XP_022983119.1 (protein SELF-PRUNING-like [Cucurbita maxima]) HSP 1 Score: 208.0 bits (528), Expect = 4.6e-50 Identity = 116/174 (66.67%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33 Identity = 86/176 (48.86%), Postives = 100/176 (56.82%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32 Identity = 81/173 (46.82%), Postives = 101/173 (58.38%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32 Identity = 81/169 (47.93%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 7.6e-32 Identity = 80/173 (46.24%), Postives = 100/173 (57.80%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy Swiss-Prot
Match: P93003 (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.2e-31 Identity = 80/168 (47.62%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A6J1F9W4 (protein SELF-PRUNING-like OS=Cucurbita moschata OX=3662 GN=LOC111442134 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51 Identity = 118/174 (67.82%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A6J1J6E2 (protein SELF-PRUNING-like OS=Cucurbita maxima OX=3661 GN=LOC111481762 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50 Identity = 116/174 (66.67%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A1S3B659 (protein SELF-PRUNING OS=Cucumis melo OX=3656 GN=LOC103486602 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42 Identity = 105/170 (61.76%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy TrEMBL
Match: B9ZYL2 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40 Identity = 103/177 (58.19%), Postives = 112/177 (63.28%), Query Frame = 0
BLAST of Carg03680 vs. ExPASy TrEMBL
Match: A0A1J7HEW2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19608 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39 Identity = 98/174 (56.32%), Postives = 106/174 (60.92%), Query Frame = 0
BLAST of Carg03680 vs. TAIR 10
Match: AT2G27550.1 (centroradialis ) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-34 Identity = 86/176 (48.86%), Postives = 100/176 (56.82%), Query Frame = 0
BLAST of Carg03680 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-32 Identity = 80/168 (47.62%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of Carg03680 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23 Identity = 71/176 (40.34%), Postives = 89/176 (50.57%), Query Frame = 0
BLAST of Carg03680 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 61/167 (36.53%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of Carg03680 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20 Identity = 62/167 (37.13%), Postives = 76/167 (45.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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