Carg03910 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03910
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GTP-binding nuclear protein
Location	Carg_Chr12: 1983734 .. 1986685 (+)
RNA-Seq Expression	Carg03910
Synteny	Carg03910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGTTTCATTCCTTCGTTCAGGCGCTGCCGAGTCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGACGGTGGAACAGGTATGGAGATAGATTTTTCTATTTCGTTTTCTTGATGTCTTTTTATGCTCAATTTGCCACGATACTTTGCATGCATAGCTATAGGAACTAGAACTATATGATGCTGCTCCTCAGGTTTTACTGAATCCAGTCTTCTTTAGTGGAATAGAATTTGTATTATTTCTCCGTTCGTAGCGTATGAATTCGATCGGAGATGTTGCCAAAACAGGTTACTGGACTAGGCTTCTGTTGGAAGGCGTTTCAATGTTTCATGTGTATTGTGTGATTAGAGATCGTTAGATCTATGCCTTACTCTTTTTACAATTTTTGTTTATTGCAATGATGTTATTAACCTCTAACGGAGGAGTGTGTTCTGATCCAGGGAAGACTACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACGTAAGAATGAATTATGTAGTTGATTATTGCTCGTCGTTTAATAAATGATATTTGTAAGGTTGAAGCACTACTAATATTTGTCCTGGTTTGATTATGTATAGCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTAGTAAGTGTTCATGTGTAATTTCAAATGTGTTTTGATCACGGCAATGATTTACTCTTAATATGCTGGTATATATTATTGAAGCGGTGTTCTTCCGTGTAGTTTGTTCATTTGTGCTGTGTTCAACCTGGTTTACTAGTACAGAAGTCTTAAGCATCTATCTTCTCTTCTGTATAGAAAGCATGCTTTATAACTTAGTCTTAGCTCTTTGATACTTTAGATCATGTAATCGATTTCTTTTCTAATTTTATTCATTTTGTTAAAGGAAGAATATTATAGAAAATTACATTTGTTCTTTATTAATCAAGTGTTTGATGAACACTTTTAGGTTTGAATTGATTTGTTTTAAGCGATCATCTTCTAAAATTTTGTATAAATATTGCAAGTCCGTTACTGAACTATTGTGGCCAAGACATTGTTTTACTATGATACTATGCGTCCAGCTTTAACTTCTCTTTGCATGCTCACAAACTCTGGAGAACAAAAGTATTTCTTATCTTATCAACCTTTTCATATGGTATTTTTTTAATATTTTTTATCGCAGACTGAAATGTTGAATCTATTGTTTACTGTTGCAATACATTCGAACATAGATACAATGTAGTTTTCAAATTATCCTCAGTTCTTTTAGAATTTGATGGGCGCTGTGACTTTGATTAATTGATTCATTTTCCATGCCTGTCCTACATTTATATTAATTCTTACTTGCTTTGTGCATTTTTTCTTTTGGAATTCAGTATTCATGGACAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAACGTCCCAACATGGCACCGAGATCTCTGCAGGTATTGTGTTTCTAACCCAAAGGCTCTGAAACACTTCAAAACTCTGGCTTTTTATGTTAGTTTGAAATTTGTGTTTCTTACAAGGACATTTTTAAGAGGTTCCCCACTAGTGGCCTCTTGGGAAAAAAGAAAGTTACTAACAGAATGAGATTTGTTGCTATCTATATGTACAATTGTTTAACTTTTGATGTATAAAATGAAGGAAAATAATTAGTGCATGAAAACAAAGTTAAAAATATAAAATAAAAAGAACTTCTCAAATGAAAATTCGAAACGGAAAAGAAAAAATAAATCAACATTCATCTATTGTGTTGTGCTGGTTATAAATTTGGCATTGCTCTGTACCTACCAGGGTTTGTGAGAACATACCCATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCTTTCTTGTATCTTGCTAGAAAGCTTGCTGGGTATGTTCAGTTGTTCTTATTGTTAGTTTGGCATAGTATTGGTTGGTCTTTCCATCAGTTTCATATTAGTCTCATCGGCTGACTCTTTCACAAACAAATTCGTCTTTTATCGGAACGTGCAGGAATACGGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCGGAACAAGCACAGTAAGTTACCGCTATTACCTGATAAATATTTTTAAACCTGTGCCTCCGTCACACCTGCACTTAGAATCTTGCTGGCCAATATAGTTAGGTTATTGATGTGAGTTTTGGGTGTGTTCTGACATGGCTTCCAAGTCCATAGTGCTTACCATCTTCTAGCTTAGAAAGGGAAATGACGATCCATAGGAATTACTCTAGGTTGACCTTGGACTAATATCTAGGTAGAATAATTTAAATAATAAAATATATAGGGAGAATAATTTCCGACTAATATAGTGTAAGTTTTCTTTAATATAGTCGGGTTTACCAACCGACTCGTACGAATATTTGAAGTAAGTCTAAGTCAAGCAGTTCAGACATTCACTAACGACTACTTTTGTGTTTTAGGCACGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAGGATGACGATGCTTTTGAGTGAAGCGCTTTATATCAACCGACCTGGCTTTGCTGTTTAGGGTTTTATGGTGTGGTTTGTGGTTGTGGTTTTCTGGAGTTTGGAAGGCCGATCTATGTGGTTCTTTATTGAGGTCGGTTGTTGGTTGTGTAATTCACTATATAATTGGACATAGTAGGTTTGGTTTGATATATTACTACTGCCATCGATTAAATTTTGATAAATGAATACCATT

mRNA sequence

TTTTGGTTTCATTCCTTCGTTCAGGCGCTGCCGAGTCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGACGGTGGAACAGGGAAGACTACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGACAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAACGTCCCAACATGGCACCGAGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCTTTCTTGTATCTTGCTAGAAAGCTTGCTGGGAATACGGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCGGAACAAGCACAGCACGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAGGATGACGATGCTTTTGAGTGAAGCGCTTTATATCAACCGACCTGGCTTTGCTGTTTAGGGTTTTATGGTGTGGTTTGTGGTTGTGGTTTTCTGGAGTTTGGAAGGCCGATCTATGTGGTTCTTTATTGAGGTCGGTTGTTGGTTGTGTAATTCACTATATAATTGGACATAGTAGGTTTGGTTTGATATATTACTACTGCCATCGATTAAATTTTGATAAATGAATACCATT

Coding sequence (CDS)

TTTTGGTTTCATTCCTTCGTTCAGGCGCTGCCGAGTCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGACGGTGGAACAGGGAAGACTACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGACAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAACGTCCCAACATGGCACCGAGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATCTCTGCAAAGAGTAATTACAACTTCGAGAAGCCTTTCTTGTATCTTGCTAGAAAGCTTGCTGGGAATACGGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCGGAACAAGCACAGCACGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAGGATGACGATGCTTTTGAGTGA

Protein sequence

FWFHSFVQALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE

Homology

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BLAST of Carg03910 vs. NCBI nr
Match: KAG7020371.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 2.2e-130
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   FWFHSFVQALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPL 60
           FWFHSFVQALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPL
Sbjct: 1   FWFHSFVQALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPL 60

Query: 61  DFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 120
           DFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR
Sbjct: 61  DFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 120

Query: 121 VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 180
           VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG
Sbjct: 121 VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 180

Query: 181 NTELHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           NTELHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 NTELHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 228

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BLAST of Carg03910 vs. NCBI nr
Match: KAG6585456.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461.1 bits (1185), Expect = 5.7e-126
Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 4   HSFVQALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFF 63
           +SF  ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFF
Sbjct: 435 YSFSMALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFF 494

Query: 64  TNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE 123
           TNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE
Sbjct: 495 TNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE 554

Query: 124 NIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTE 183
           NIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTE
Sbjct: 555 NIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTE 614

Query: 184 LHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           LHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 615 LHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 659

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BLAST of Carg03910 vs. NCBI nr
Match: XP_022951841.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >XP_023538292.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.2 bits (1175), Expect = 8.2e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

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BLAST of Carg03910 vs. NCBI nr
Match: XP_038884642.1 (GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPase [Citrullus lanatus] >BAR79437.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 447.6 bits (1150), Expect = 6.5e-122
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN ELHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I+LA QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

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BLAST of Carg03910 vs. NCBI nr
Match: XP_022996825.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445.7 bits (1145), Expect = 2.5e-121
Identity = 213/220 (96.82%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

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BLAST of Carg03910 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-119
Identity = 205/220 (93.18%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

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BLAST of Carg03910 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-118
Identity = 203/220 (92.27%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 182 SPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

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BLAST of Carg03910 vs. ExPASy Swiss-Prot
Match: P41916 (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-118
Identity = 202/220 (91.82%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           +PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDD FE
Sbjct: 182 TPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Carg03910 vs. ExPASy Swiss-Prot
Match: P38546 (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-118
Identity = 204/220 (92.73%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV I+LA QA HE EL QAA QPLPD+DD+AFE
Sbjct: 182 SPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of Carg03910 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 4.5e-118
Identity = 202/220 (91.82%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP Q  VDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I+LA Q QHEAELA AA+QPLPD+DD+ F+
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of Carg03910 vs. ExPASy TrEMBL
Match: A0A6J1KLG3 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.0e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Carg03910 vs. ExPASy TrEMBL
Match: A0A6J1GIL6 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.0e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Carg03910 vs. ExPASy TrEMBL
Match: A0A068PVW7 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.1e-122
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN ELHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I+LA QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Carg03910 vs. ExPASy TrEMBL
Match: A0A6J1K7U8 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 213/220 (96.82%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Carg03910 vs. ExPASy TrEMBL
Match: A0A6J1HAZ9 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.5e-121
Identity = 212/220 (96.36%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+QATV+YPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 182 SPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Carg03910 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 430.6 bits (1106), Expect = 7.6e-121
Identity = 205/220 (93.18%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV+I+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Carg03910 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-119
Identity = 203/220 (92.27%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           SPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 182 SPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Carg03910 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-119
Identity = 202/220 (91.82%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 229
           +PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDD FE
Sbjct: 182 TPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Carg03910 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-81
Identity = 142/211 (67.30%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68
           ALP+Q  VD P+FKL+IVGDGGTGKTTF+KRH+TGEFE   EPT+GV+++PLDFFTN GK
Sbjct: 2   ALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGK 61

Query: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128
           IRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPIV
Sbjct: 62  IRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIV 121

Query: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188
           LCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG+ +L FVE
Sbjct: 122 LCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFVE 181

Query: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPL 220
           S     PE +I+  +    +    +A  QPL
Sbjct: 182 S-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Carg03910 vs. TAIR 10
Match: AT5G39620.1 (RAB GTPase homolog G1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 55/170 (32.35%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 22  KLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEK 81
           K++++GD G GKT+ +KR+   +F++ +  TI V++   +      ++    WDTAGQE+
Sbjct: 7   KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQER 66

Query: 82  FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDV 141
           F  L   +Y    C ++++DV    T++++  WH +  +          P VL GNK DV
Sbjct: 67  FKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDV 126

Query: 142 KN--RQVKAKQVTFH---RKKNLQYYEISAKSNYNFEKPFLYLARKLAGN 182
            N   +V AK++       K N+ Y+E SAK+  N E+ FL +A+K   N
Sbjct: 127 NNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTN 176

The following BLAST results are available for this feature:

BLAST of Carg03910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020371.1	2.2e-130	100.00	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585456.1	5.7e-126	98.67	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951841.1	8.2e-125	100.00	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-...	[more]
XP_038884642.1	6.5e-122	97.27	GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPas...	[more]
XP_022996825.1	2.5e-121	96.82	GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-bind...	[more]

BLAST of Carg03910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	1.1e-119	93.18	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	1.6e-118	92.27	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41916	3.5e-118	91.82	GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 S...	[more]
P38546	3.5e-118	92.73	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]
P41918	4.5e-118	91.82	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]

BLAST of Carg03910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLG3	4.0e-125	100.00	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=...	[more]
A0A6J1GIL6	4.0e-125	100.00	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 S...	[more]
A0A068PVW7	3.1e-122	97.27	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1	[more]
A0A6J1K7U8	1.2e-121	96.82	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=...	[more]
A0A6J1HAZ9	3.5e-121	96.36	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 S...	[more]

BLAST of Carg03910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	7.6e-121	93.18	RAN GTPase 3	[more]
AT5G20020.1	1.1e-119	92.27	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	2.5e-119	91.82	RAS-related nuclear protein-1	[more]
AT5G55080.1	1.6e-81	67.30	ras-related nuclear protein 4	[more]
AT5G39620.1	1.6e-22	32.35	RAB GTPase homolog G1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 137..155 score: 81.38 coord: 81..99 score: 89.88 coord: 175..197 score: 71.57 coord: 101..122 score: 86.19 coord: 34..48 score: 89.49
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 6..228
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 14..178 score: 29.878357
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 21..181 e-value: 1.5E-28 score: 110.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 18..181 e-value: 5.2E-19 score: 79.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 26..227 e-value: 4.3E-162 score: 554.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..228
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 6..228
None	No IPR available	PROSITE	PS51419	RAB	coord: 15..217 score: 20.026541
None	No IPR available	CDD	cd00877	Ran	coord: 21..186 e-value: 1.50951E-129 score: 360.463
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 23..177 e-value: 1.1E-8 score: -7.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 22..178 e-value: 2.0E-50 score: 170.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 12..212 score: 9.96104
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..226 e-value: 6.5E-69 score: 233.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..202
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 21..171 e-value: 2.9E-24 score: 83.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03910-RA	Carg03910-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding